Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is insK [C]
Identifier: 119855045
GI number: 119855045
Start: 164520
End: 165596
Strand: Direct
Name: insK [C]
Synonym: Mkms_5655
Alternate gene names: 119855045
Gene position: 164520-165596 (Clockwise)
Preceding gene: 119855042
Following gene: 119855051
Centisome position: 54.46
GC content: 64.81
Gene sequence:
>1077_bases ATGCACCTTCCCAAGGAAGGAGGTGCGCATCAAACGCGGGATGGTTCACCTGGAGATCACCGAGTCGACCTGGCACCGCT GGATTGCCCAGTACGGCGGCATGAAAGCCAACGAGGCCAAACGGCTCAAGGAACTCGAAGCCGAGAACGCCCGGCTCAAG AAGCTGGTCGCCAACCAGGCCCTCGACATCGACATGCTCAAGGAGATTTCGGCGGGAAACTTCTAACCCCGAATCGCAAG CGCAGCGCCGTCATAGCGCTGCGTGAGCGGTTCGGGGTCTCTGAGCGCCGCGCCTGCACCGTCGTCGGTCTGCACCGTTC CACGATGCGGCTGACACCGGCACCGGTCACCACCGAGGAGGCCGAGCTTCGTGCCTGGCTGCGCCGGTTTTCCACCGACC GCCCGCGGTGGGGGTGGCGACGGGCCGCCAAGATGGCGCGCCGTGCCGGCTGGAAGGCCAACAACAAGCGCATCCGCCGA CTGTGGCGCGAGGAGGGCCTGCGGGTGCCTCAGCGGCGCCGCAAGAAGCGGCTGACCGGCATCGGTGTCGCCGTGGGTGC GATGTCCCCGATCCGCCCGAACGTGATCTGGGCGATGGACTTCCAGTTCGACACCACCGCCGATGGCCGCACGCTGAAGA TGCTCAACGTCATCGACGAGTTCACTCGCGAAGCACTCGCGATCGAGGTCGACCGCGCCATCAACGCCGACGGCGTCGTC GACGTGCTGGATCGCCTGGCCCTCACCTACGGGGCGCCACACTATGTGCGCTTCGACAACGGTCCCGAGTTCGTCGCGAA CGCCGTGGCCGATTGGTGCCGATTCAACAGTGCCGGTTCACTTTTCATAGATCCGGGCTCGCCATGGCAAAACGCCTGGA TCGAATCATTCAACGGCAGGCTCCGTGATGAACTGCTCAACCTGTGGCGCTTCGACTCCCTGCTGGAGGCCCGCGTGATC ATCGAGGACTGGCGCCGCGACTACAACGCCAACCGACCCCACTCCGCCCACGGCGAACTCACCCCAGCCGAGTTCGCTCT ACAGTGGACCACGACCCATCAACCCCAAGTCGCATAA
Upstream 100 bases:
>100_bases CGGTAATCGCCGCCCACTCGCTCGGATAGTCCTCCCGGTGCTCGCGCACCAGACGGACCGCCTTCGCTCGGGTCTCCGGG TCGTACTTGCTCGGCATGAC
Downstream 100 bases:
>100_bases CGACTGGACCACCAAACGGGTCCCCCTCAGGGTGCCGAGCGCGTAAAGCCGGAAATAGTAGAGGACATCGGCGGGAAAGC CCTCATAGACGATCGCGCCT
Product: integrase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MHLPKEGGAHQTRDGSPGDHRVDLAPLDCPVRRHESQRGQTAQGTRSRERPAQEAGRQPGPRHRHAQGDFGGKLLTPNRK RSAVIALRERFGVSERRACTVVGLHRSTMRLTPAPVTTEEAELRAWLRRFSTDRPRWGWRRAAKMARRAGWKANNKRIRR LWREEGLRVPQRRRKKRLTGIGVAVGAMSPIRPNVIWAMDFQFDTTADGRTLKMLNVIDEFTREALAIEVDRAINADGVV DVLDRLALTYGAPHYVRFDNGPEFVANAVADWCRFNSAGSLFIDPGSPWQNAWIESFNGRLRDELLNLWRFDSLLEARVI IEDWRRDYNANRPHSAHGELTPAEFALQWTTTHQPQVA
Sequences:
>Translated_358_residues MHLPKEGGAHQTRDGSPGDHRVDLAPLDCPVRRHESQRGQTAQGTRSRERPAQEAGRQPGPRHRHAQGDFGGKLLTPNRK RSAVIALRERFGVSERRACTVVGLHRSTMRLTPAPVTTEEAELRAWLRRFSTDRPRWGWRRAAKMARRAGWKANNKRIRR LWREEGLRVPQRRRKKRLTGIGVAVGAMSPIRPNVIWAMDFQFDTTADGRTLKMLNVIDEFTREALAIEVDRAINADGVV DVLDRLALTYGAPHYVRFDNGPEFVANAVADWCRFNSAGSLFIDPGSPWQNAWIESFNGRLRDELLNLWRFDSLLEARVI IEDWRRDYNANRPHSAHGELTPAEFALQWTTTHQPQVA >Mature_358_residues MHLPKEGGAHQTRDGSPGDHRVDLAPLDCPVRRHESQRGQTAQGTRSRERPAQEAGRQPGPRHRHAQGDFGGKLLTPNRK RSAVIALRERFGVSERRACTVVGLHRSTMRLTPAPVTTEEAELRAWLRRFSTDRPRWGWRRAAKMARRAGWKANNKRIRR LWREEGLRVPQRRRKKRLTGIGVAVGAMSPIRPNVIWAMDFQFDTTADGRTLKMLNVIDEFTREALAIEVDRAINADGVV DVLDRLALTYGAPHYVRFDNGPEFVANAVADWCRFNSAGSLFIDPGSPWQNAWIESFNGRLRDELLNLWRFDSLLEARVI IEDWRRDYNANRPHSAHGELTPAEFALQWTTTHQPQVA
Specific function: Involved in the transposition of the insertion sequence is150 [C]
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 40902; Mature: 40902
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLPKEGGAHQTRDGSPGDHRVDLAPLDCPVRRHESQRGQTAQGTRSRERPAQEAGRQPG CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHHCCCHHHHCCCCC PRHRHAQGDFGGKLLTPNRKRSAVIALRERFGVSERRACTVVGLHRSTMRLTPAPVTTEE CCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCH AELRAWLRRFSTDRPRWGWRRAAKMARRAGWKANNKRIRRLWREEGLRVPQRRRKKRLTG HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH IGVAVGAMSPIRPNVIWAMDFQFDTTADGRTLKMLNVIDEFTREALAIEVDRAINADGVV CEEHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHH DVLDRLALTYGAPHYVRFDNGPEFVANAVADWCRFNSAGSLFIDPGSPWQNAWIESFNGR HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCH LRDELLNLWRFDSLLEARVIIEDWRRDYNANRPHSAHGELTPAEFALQWTTTHQPQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEECCCCCCCC >Mature Secondary Structure MHLPKEGGAHQTRDGSPGDHRVDLAPLDCPVRRHESQRGQTAQGTRSRERPAQEAGRQPG CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHHCCCHHHHCCCCC PRHRHAQGDFGGKLLTPNRKRSAVIALRERFGVSERRACTVVGLHRSTMRLTPAPVTTEE CCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCH AELRAWLRRFSTDRPRWGWRRAAKMARRAGWKANNKRIRRLWREEGLRVPQRRRKKRLTG HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH IGVAVGAMSPIRPNVIWAMDFQFDTTADGRTLKMLNVIDEFTREALAIEVDRAINADGVV CEEHHCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHH DVLDRLALTYGAPHYVRFDNGPEFVANAVADWCRFNSAGSLFIDPGSPWQNAWIESFNGR HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCH LRDELLNLWRFDSLLEARVIIEDWRRDYNANRPHSAHGELTPAEFALQWTTTHQPQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2152895 [H]