Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119854993
Identifier: 119854993
GI number: 119854993
Start: 110390
End: 110950
Strand: Direct
Name: 119854993
Synonym: Mkms_5600
Alternate gene names: NA
Gene position: 110390-110950 (Clockwise)
Preceding gene: 119854992
Following gene: 119854994
Centisome position: 36.54
GC content: 65.24
Gene sequence:
>561_bases GTGAGCGATGCGCTCGACGAAGGACTGGTGCAGCGCATCGACGCGCGTGGCACCATCCAGTGGTCGGGAACGTGCGCTCG GTACACCGGCGCCCGCCGTGATCCTTTATCGGGGGAAGGGGCACGCAGATTCGGCGGCAGGTGGAACCCGCCGTTGCTGT TCTCAGCGATCTATCTGGCCGATTCCGCGCAAGCGTGCATGGTTGAAGTGGAACGCGCCGCGCAGGCGGCATCAACGACC CCGGAGAAGCTGCTCGAAGCCTCCTACCGGCTGCATACCATCGAGGCCACCGACCTGTCAGTCCTGGATCTCACCACCCC AGAAGCCCGCGAGGCGGTAGGACTGGAAGACGACGACATCCACGGCGACGATTGGTCGGCCTGCCAAGCAGTAGGTCATG CCGCATGGTTTCTGCATGTGCAAGGCGTCCTGGTGCCCGCAGCCGGCGGAGTCGGCCTAGTCATAACCGCCTACGAGCAA CGCACGCGCCCGGGCCAACTGCAGGTCACTCGCAGCGAGCATCTGACGCCTGCCCGCTACCGCGAACTGCGGCAACTGTG A
Upstream 100 bases:
>100_bases ATCGATTACTCGCGCACGGCAAGCCCGCCGACCTGGTACGCGACGGCGAATACCAGCGCGTCTTGGCCCTCATTGACGCC ATGGCCGAAGGGATCTTTGT
Downstream 100 bases:
>100_bases TCAACATCCATTGCTCCTCAACCGCGTTGACTGAGGGCCGTCCGTGAGGGGATGTGAGTGACTCACGGCTGCGCGAACGG CTCAAAGCGACTCGTGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSDALDEGLVQRIDARGTIQWSGTCARYTGARRDPLSGEGARRFGGRWNPPLLFSAIYLADSAQACMVEVERAAQAASTT PEKLLEASYRLHTIEATDLSVLDLTTPEAREAVGLEDDDIHGDDWSACQAVGHAAWFLHVQGVLVPAAGGVGLVITAYEQ RTRPGQLQVTRSEHLTPARYRELRQL
Sequences:
>Translated_186_residues MSDALDEGLVQRIDARGTIQWSGTCARYTGARRDPLSGEGARRFGGRWNPPLLFSAIYLADSAQACMVEVERAAQAASTT PEKLLEASYRLHTIEATDLSVLDLTTPEAREAVGLEDDDIHGDDWSACQAVGHAAWFLHVQGVLVPAAGGVGLVITAYEQ RTRPGQLQVTRSEHLTPARYRELRQL >Mature_185_residues SDALDEGLVQRIDARGTIQWSGTCARYTGARRDPLSGEGARRFGGRWNPPLLFSAIYLADSAQACMVEVERAAQAASTTP EKLLEASYRLHTIEATDLSVLDLTTPEAREAVGLEDDDIHGDDWSACQAVGHAAWFLHVQGVLVPAAGGVGLVITAYEQR TRPGQLQVTRSEHLTPARYRELRQL
Specific function: Unknown
COG id: COG5654
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014914 [H]
Pfam domain/function: PF08808 RES [H]
EC number: NA
Molecular weight: Translated: 20300; Mature: 20169
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDALDEGLVQRIDARGTIQWSGTCARYTGARRDPLSGEGARRFGGRWNPPLLFSAIYLA CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHH DSAQACMVEVERAAQAASTTPEKLLEASYRLHTIEATDLSVLDLTTPEAREAVGLEDDDI CCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCEEEEECCCCHHHHHCCCCCCCC HGDDWSACQAVGHAAWFLHVQGVLVPAAGGVGLVITAYEQRTRPGQLQVTRSEHLTPARY CCCCHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHH RELRQL HHHHCC >Mature Secondary Structure SDALDEGLVQRIDARGTIQWSGTCARYTGARRDPLSGEGARRFGGRWNPPLLFSAIYLA CCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHH DSAQACMVEVERAAQAASTTPEKLLEASYRLHTIEATDLSVLDLTTPEAREAVGLEDDDI CCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEECCCEEEEECCCCHHHHHCCCCCCCC HGDDWSACQAVGHAAWFLHVQGVLVPAAGGVGLVITAYEQRTRPGQLQVTRSEHLTPARY CCCCHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHH RELRQL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]