Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is 119854988
Identifier: 119854988
GI number: 119854988
Start: 106741
End: 107493
Strand: Direct
Name: 119854988
Synonym: Mkms_5595
Alternate gene names: NA
Gene position: 106741-107493 (Clockwise)
Preceding gene: 119854986
Following gene: 119854989
Centisome position: 35.33
GC content: 65.6
Gene sequence:
>753_bases ATGTCACGGATCGACCGTAGCTTTCCGCTGCGGGTAGCGCCGATCCAGGGCGAGGCGCTTGACTCCTGGCTCGACGCGAT CGCCCACCGGCACCACGTGCCACGCCGAGCTGTCATCGAGCGATGCGCCATCGCACCCATTTCGTTCTACGGGGCCTGGA TACGCCTACTCACCCCCGCCGATATCGACGGAATCGCTCAGGCAACCGGCTACGGCCGCCATGTTGTCAATGCGTTGGCG TTGCCGCGCAGCGGAAGTGGTGTGGGCCCGCTCAGCGGTGGACGAACGCTGCTGTCCTCGACTTGGGACTGGCGCACCTC CTCACGTTGGTGCCCACAGTGCCTGACCGACACCGGAGGGCGCTGGCTGCTCGCATGGCGACTCAACTGGACCTTCGCCT GTCCTACCCACAAATGCCTGCTGCAGGACGGTTGCCCGAACTGCGCTGCGCCGCAACGCTACCGCCCACCCACCTACATG ATCCCCGAGTTGGACCGATGTGCTCAACCGATCCTCGACCTCGTCGGGCAGCGGCGGCTTTGCGGCGCCGACCTGACCCG CGTTCAGCCAGCCGATCACCCCCTGAGCCTCTCGATGGCGCGGACCCAGCGGCTCATCAACGCGCTGCTCGCGGGAAGAC CAAGGCGGCTCCGCGTGTACGGCGCACATCAACCGAGACCACACGAGATGCTCATGGACGTGAAAACCCTTGCTCGTACG TCTTCACACTTCTCGGCGGCGCCGCGGACTTAA
Upstream 100 bases:
>100_bases CGCTAGCAGTACATTGAGGTGTGAGTGAGGCGCGAGGGGCAACCGGTCAATACCGGCTCAGCCAGTCCTCGCGTCCTCGA GTCGACGTGCCACCCCCTCG
Downstream 100 bases:
>100_bases CGCTGCGCTCCGACAACGCTGTTGCCGCCAGCCCAGACCGCAGCAGCAAAGGACGAACCACGGCCCGACCCACGATGCCC TCCGCCGTGCACACCGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSRIDRSFPLRVAPIQGEALDSWLDAIAHRHHVPRRAVIERCAIAPISFYGAWIRLLTPADIDGIAQATGYGRHVVNALA LPRSGSGVGPLSGGRTLLSSTWDWRTSSRWCPQCLTDTGGRWLLAWRLNWTFACPTHKCLLQDGCPNCAAPQRYRPPTYM IPELDRCAQPILDLVGQRRLCGADLTRVQPADHPLSLSMARTQRLINALLAGRPRRLRVYGAHQPRPHEMLMDVKTLART SSHFSAAPRT
Sequences:
>Translated_250_residues MSRIDRSFPLRVAPIQGEALDSWLDAIAHRHHVPRRAVIERCAIAPISFYGAWIRLLTPADIDGIAQATGYGRHVVNALA LPRSGSGVGPLSGGRTLLSSTWDWRTSSRWCPQCLTDTGGRWLLAWRLNWTFACPTHKCLLQDGCPNCAAPQRYRPPTYM IPELDRCAQPILDLVGQRRLCGADLTRVQPADHPLSLSMARTQRLINALLAGRPRRLRVYGAHQPRPHEMLMDVKTLART SSHFSAAPRT >Mature_249_residues SRIDRSFPLRVAPIQGEALDSWLDAIAHRHHVPRRAVIERCAIAPISFYGAWIRLLTPADIDGIAQATGYGRHVVNALAL PRSGSGVGPLSGGRTLLSSTWDWRTSSRWCPQCLTDTGGRWLLAWRLNWTFACPTHKCLLQDGCPNCAAPQRYRPPTYMI PELDRCAQPILDLVGQRRLCGADLTRVQPADHPLSLSMARTQRLINALLAGRPRRLRVYGAHQPRPHEMLMDVKTLARTS SHFSAAPRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27893; Mature: 27761
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIDRSFPLRVAPIQGEALDSWLDAIAHRHHVPRRAVIERCAIAPISFYGAWIRLLTPA CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCC DIDGIAQATGYGRHVVNALALPRSGSGVGPLSGGRTLLSSTWDWRTSSRWCPQCLTDTGG CCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCCCC RWLLAWRLNWTFACPTHKCLLQDGCPNCAAPQRYRPPTYMIPELDRCAQPILDLVGQRRL CEEEEEEECEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC CGADLTRVQPADHPLSLSMARTQRLINALLAGRPRRLRVYGAHQPRPHEMLMDVKTLART CCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH SSHFSAAPRT HHHCCCCCCC >Mature Secondary Structure SRIDRSFPLRVAPIQGEALDSWLDAIAHRHHVPRRAVIERCAIAPISFYGAWIRLLTPA CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCC DIDGIAQATGYGRHVVNALALPRSGSGVGPLSGGRTLLSSTWDWRTSSRWCPQCLTDTGG CCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCCCC RWLLAWRLNWTFACPTHKCLLQDGCPNCAAPQRYRPPTYMIPELDRCAQPILDLVGQRRL CEEEEEEECEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC CGADLTRVQPADHPLSLSMARTQRLINALLAGRPRRLRVYGAHQPRPHEMLMDVKTLART CCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH SSHFSAAPRT HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA