Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
---|---|
Accession | NC_008703 |
Length | 302,089 |
Click here to switch to the map view.
The map label for this gene is 119854980
Identifier: 119854980
GI number: 119854980
Start: 96602
End: 97426
Strand: Direct
Name: 119854980
Synonym: Mkms_5587
Alternate gene names: NA
Gene position: 96602-97426 (Clockwise)
Preceding gene: 119854976
Following gene: 119854981
Centisome position: 31.98
GC content: 67.15
Gene sequence:
>825_bases GTGGTCTGTCAATCGCAGCCGGTCAGCGTTAGCGCGTTCTTCACTGGCATCGGGCCAGGATGTGCCTCGTGTTGTTCCGA AACCGTGATAACCGCTGGATACACTGGCGCGGTGGAGGACGGCGGTGTAGACGACGGGATTGCCCGTGCGGGCGCCGCTG TCGCAGCTCGCCGACGTGAATTGGGGATTTCCCAGCGTGAGCTGGCACGCCAGAGAGTCATCACAGCCCCGGCGCTGATC CACTTTGAGAAAGGCCGGTCCTGGCCCAGGGAGCGCACCAGACACACCCTGGAGGAACTTTTGCAGTGGCCGGCGGGAAC GATAGCGCGCATCCGAGCCGGAGGCACGGCTGATGAAGTGGCCGCCCCGCCGCCGGATGGGTCCGAGAACGCTGCGCTGG TGGTGGATGCGCTCAAGTTGGCCTTGGCCCGCTTCGCCACTGCGATCGACGATCTGCCCCCGGCTTCGTCACCGGACTTC GCCAACCGCGCGTCGACGATCCTGGCCGACCTGCGCAAGTTAGAGGCACTTGCCGCGCGGGCGATGCGCCACAGCCAGGG CTCGCCGGCTGAGGTGGTCAAGTCGCTGGGGCTGATTCGCGGCCGCTATGACGACCTCATGCTCAAGACCGCAGCCCATC CGGACGCCTCGTCGGGCCAGCGGCTCTACGCGGCACGACGCCGAGCGAACTTGAGCGCCGGTGAGGCGGCCGCGGTGGGC GGTCTCTCAGCAGAACTGGTGGAAACTGCCGAAGCGGGCAAGCCGCTGGATCCCCCAAGCGCGGCACGGGTGGAAGCGTT GATCGCCGAACTCGTCGGCCCGTGA
Upstream 100 bases:
>100_bases CGTCGCTCCTCCCAATGCGTCATCGAATGACCGCAACTTTAGCACCAAGCTTTTGCGCTGCAATACTTAGCGATAAATTC CAGCGCTGAAGTTTTGCGCC
Downstream 100 bases:
>100_bases CGCCACCCAGTCAAGATTCGGGCAGGCGGGTTTCGGCGCGGCCATGAAAATGACTGCATGAGAACACCTTCGGTGACTGT GTCGACGATGGTCGCAGCTG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MVCQSQPVSVSAFFTGIGPGCASCCSETVITAGYTGAVEDGGVDDGIARAGAAVAARRRELGISQRELARQRVITAPALI HFEKGRSWPRERTRHTLEELLQWPAGTIARIRAGGTADEVAAPPPDGSENAALVVDALKLALARFATAIDDLPPASSPDF ANRASTILADLRKLEALAARAMRHSQGSPAEVVKSLGLIRGRYDDLMLKTAAHPDASSGQRLYAARRRANLSAGEAAAVG GLSAELVETAEAGKPLDPPSAARVEALIAELVGP
Sequences:
>Translated_274_residues MVCQSQPVSVSAFFTGIGPGCASCCSETVITAGYTGAVEDGGVDDGIARAGAAVAARRRELGISQRELARQRVITAPALI HFEKGRSWPRERTRHTLEELLQWPAGTIARIRAGGTADEVAAPPPDGSENAALVVDALKLALARFATAIDDLPPASSPDF ANRASTILADLRKLEALAARAMRHSQGSPAEVVKSLGLIRGRYDDLMLKTAAHPDASSGQRLYAARRRANLSAGEAAAVG GLSAELVETAEAGKPLDPPSAARVEALIAELVGP >Mature_274_residues MVCQSQPVSVSAFFTGIGPGCASCCSETVITAGYTGAVEDGGVDDGIARAGAAVAARRRELGISQRELARQRVITAPALI HFEKGRSWPRERTRHTLEELLQWPAGTIARIRAGGTADEVAAPPPDGSENAALVVDALKLALARFATAIDDLPPASSPDF ANRASTILADLRKLEALAARAMRHSQGSPAEVVKSLGLIRGRYDDLMLKTAAHPDASSGQRLYAARRRANLSAGEAAAVG GLSAELVETAEAGKPLDPPSAARVEALIAELVGP
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28490; Mature: 28490
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCQSQPVSVSAFFTGIGPGCASCCSETVITAGYTGAVEDGGVDDGIARAGAAVAARRRE CCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LGISQRELARQRVITAPALIHFEKGRSWPRERTRHTLEELLQWPAGTIARIRAGGTADEV HCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC AAPPPDGSENAALVVDALKLALARFATAIDDLPPASSPDFANRASTILADLRKLEALAAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AMRHSQGSPAEVVKSLGLIRGRYDDLMLKTAAHPDASSGQRLYAARRRANLSAGEAAAVG HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHC GLSAELVETAEAGKPLDPPSAARVEALIAELVGP CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MVCQSQPVSVSAFFTGIGPGCASCCSETVITAGYTGAVEDGGVDDGIARAGAAVAARRRE CCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LGISQRELARQRVITAPALIHFEKGRSWPRERTRHTLEELLQWPAGTIARIRAGGTADEV HCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC AAPPPDGSENAALVVDALKLALARFATAIDDLPPASSPDFANRASTILADLRKLEALAAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AMRHSQGSPAEVVKSLGLIRGRYDDLMLKTAAHPDASSGQRLYAARRRANLSAGEAAAVG HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHC GLSAELVETAEAGKPLDPPSAARVEALIAELVGP CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA