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The map label for this gene is hupH [H]

Identifier: 119900084

GI number: 119900084

Start: 4155192

End: 4156064

Strand: Direct

Name: hupH [H]

Synonym: azo3795

Alternate gene names: 119900084

Gene position: 4155192-4156064 (Clockwise)

Preceding gene: 119900083

Following gene: 119900085

Centisome position: 94.95

GC content: 72.16

Gene sequence:

>873_bases
ATGAAAGCCTGGTCCGCCAACGCCTTCCCGATTCCCGTCGTCGCCGCCGGCCCCGGTTCGCAGCCGGAAGAAGACGAAGC
GCTCGACTACCTGCCGCTGCCCAGCGGCATGGACACCTTCGCCCCGCCCCGCCTGCCCGACCACATCGACCCCGCCTCGC
GCGCCACCGCCGTCGCCACGCTGCAGGGCCTGCTCGCCGCGATGCGCGCGTGGACCTTCGGCACGCCCGGCCACCCGGTC
GTCGATCTCGCGCCGCTCGACGGCGCCAGCCTCGCGCTGATCAACGATGCGCTCGGTCAGGGCGAGGTCAGCGCCCGCGT
GCTCGGCGAGACCGAGCTGCGCATCCAGGAAACCGTGTTCGCCGGCATCTGGCGCGTGGTCGAGACCGACCGCGGCGGCC
GTCGCCTCAGCGACCGCATCGAGGCCTGCGCGATGCCGGCCGAGGTCATCACCCGCAGCCTCGAAGCCGCCCAAGCGGCG
ATTGCCGCCCCCACGCCGCCGCAGGGGGTGATGAACGCGCCCGCGGTGCTCAACGAACTGCTGCACGCAGTCGCCACCCG
CCGCCCGGGCGCGGCGGCCCACATCGTCAACCTGACCCTGCTGCCGATGAACCCGGCCGACCTGGCGTGGCTGGTGGAGG
TGCTCGGCGTCGGCCCGACGGTGATCCTGTCGCGCGGCTACGGCAATTGCCGGATCACCGCCACCGCGCTCGCCCGTACC
TGGTGGGTGCAGTACTTCAACAGCGCCGACACGCTGATCCTCAACACCCTCGAAGTGACCGAACTGCCCGACGTCGCGCC
CGCCGCGGCGGACGATTTCGGCGACAGCATCGCGCGGCTCGAGGAATGGATCGCGACCCTGTGCGACGCCTGA

Upstream 100 bases:

>100_bases
CGCCACGCTGGCCGCCGCACCCGCCGGCCGCCGCCCCGGCATCGGCATTCCGGTGCTCGGCGCCGGCCCCTCTTCCTGCC
ACTGACCCGGAACCCTCCGC

Downstream 100 bases:

>100_bases
GTCGCGCGCTATTCTTAAAGATATAAACGGAGCAGCGCCACGCCATGTTCGAAGGCAGCTACCTGGGCAACGACGCCCGC
CTCGACCCCGCCGCGCGGCT

Product: hydrogenase-1 operon protein hupH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKAWSANAFPIPVVAAGPGSQPEEDEALDYLPLPSGMDTFAPPRLPDHIDPASRATAVATLQGLLAAMRAWTFGTPGHPV
VDLAPLDGASLALINDALGQGEVSARVLGETELRIQETVFAGIWRVVETDRGGRRLSDRIEACAMPAEVITRSLEAAQAA
IAAPTPPQGVMNAPAVLNELLHAVATRRPGAAAHIVNLTLLPMNPADLAWLVEVLGVGPTVILSRGYGNCRITATALART
WWVQYFNSADTLILNTLEVTELPDVAPAAADDFGDSIARLEEWIATLCDA

Sequences:

>Translated_290_residues
MKAWSANAFPIPVVAAGPGSQPEEDEALDYLPLPSGMDTFAPPRLPDHIDPASRATAVATLQGLLAAMRAWTFGTPGHPV
VDLAPLDGASLALINDALGQGEVSARVLGETELRIQETVFAGIWRVVETDRGGRRLSDRIEACAMPAEVITRSLEAAQAA
IAAPTPPQGVMNAPAVLNELLHAVATRRPGAAAHIVNLTLLPMNPADLAWLVEVLGVGPTVILSRGYGNCRITATALART
WWVQYFNSADTLILNTLEVTELPDVAPAAADDFGDSIARLEEWIATLCDA
>Mature_290_residues
MKAWSANAFPIPVVAAGPGSQPEEDEALDYLPLPSGMDTFAPPRLPDHIDPASRATAVATLQGLLAAMRAWTFGTPGHPV
VDLAPLDGASLALINDALGQGEVSARVLGETELRIQETVFAGIWRVVETDRGGRRLSDRIEACAMPAEVITRSLEAAQAA
IAAPTPPQGVMNAPAVLNELLHAVATRRPGAAAHIVNLTLLPMNPADLAWLVEVLGVGPTVILSRGYGNCRITATALART
WWVQYFNSADTLILNTLEVTELPDVAPAAADDFGDSIARLEEWIATLCDA

Specific function: Not Known. Could Enhance The Incorporation Of Nickel To The Hydrogenase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupH/hyaF family [H]

Homologues:

Organism=Escherichia coli, GI1787211, Length=277, Percent_Identity=32.8519855595668, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006894 [H]

Pfam domain/function: PF04809 HupH_C [H]

EC number: NA

Molecular weight: Translated: 30632; Mature: 30632

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAWSANAFPIPVVAAGPGSQPEEDEALDYLPLPSGMDTFAPPRLPDHIDPASRATAVAT
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LQGLLAAMRAWTFGTPGHPVVDLAPLDGASLALINDALGQGEVSARVLGETELRIQETVF
HHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEHHHHCCCCCCEEEEECCCHHHHHHHHH
AGIWRVVETDRGGRRLSDRIEACAMPAEVITRSLEAAQAAIAAPTPPQGVMNAPAVLNEL
HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LHAVATRRPGAAAHIVNLTLLPMNPADLAWLVEVLGVGPTVILSRGYGNCRITATALART
HHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHH
WWVQYFNSADTLILNTLEVTELPDVAPAAADDFGDSIARLEEWIATLCDA
HHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAWSANAFPIPVVAAGPGSQPEEDEALDYLPLPSGMDTFAPPRLPDHIDPASRATAVAT
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LQGLLAAMRAWTFGTPGHPVVDLAPLDGASLALINDALGQGEVSARVLGETELRIQETVF
HHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEHHHHCCCCCCEEEEECCCHHHHHHHHH
AGIWRVVETDRGGRRLSDRIEACAMPAEVITRSLEAAQAAIAAPTPPQGVMNAPAVLNEL
HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LHAVATRRPGAAAHIVNLTLLPMNPADLAWLVEVLGVGPTVILSRGYGNCRITATALART
HHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHH
WWVQYFNSADTLILNTLEVTELPDVAPAAADDFGDSIARLEEWIATLCDA
HHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]