Click here to switch to the map view.

The map label for this gene is hupF [H]

Identifier: 119900082

GI number: 119900082

Start: 4154410

End: 4154721

Strand: Direct

Name: hupF [H]

Synonym: azo3793

Alternate gene names: 119900082

Gene position: 4154410-4154721 (Clockwise)

Preceding gene: 119900081

Following gene: 119900083

Centisome position: 94.94

GC content: 69.23

Gene sequence:

>312_bases
ATGTGCGTCGGCATCCCCGTGCAGGTGCTGCGCAGCGAGGAAACGCGCGCGCTGTGCCGTGACCGCGACGGCAGCGACGT
GTGGGTGGATCTGCTGCTGGTGGGCGAGCAGCCACCCGGCACCTGGCTGATGTGCTTTCTCGGCGCGGCGCGCGAGGTGA
TCGACGCCGACACCGCACAACGCACGCTCGCCGCGCTCGCGGCACTCGACACCCTGATGGCCGGCGGCGACGCCGACCTC
GACGCGGCCTTCGCCGATCTGGTGAACCGCGAACCCGAACTGCCCGATTTCCTCAAACCGCAAACCACATGA

Upstream 100 bases:

>100_bases
GCCGACGCCGCGCTGCAGATGCAGCGCTACGAGGCCGGCCGCCCGCCCGAGGACCTCGCCTGCCGCATTGGCGACATCCG
CTTCATGCCGGAGCGCTGAG

Downstream 100 bases:

>100_bases
CCAGCCCCGACGCCCTCGAAAACGCCCTTCAGCGCCTTGCCCAGCGCGACGGATTCCAACGCCTGGAAGCCTCCGATCTG
CCCGCCTTCGCCGCCGCCCC

Product: putative hydrogenase expression/formation protein hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MCVGIPVQVLRSEETRALCRDRDGSDVWVDLLLVGEQPPGTWLMCFLGAAREVIDADTAQRTLAALAALDTLMAGGDADL
DAAFADLVNREPELPDFLKPQTT

Sequences:

>Translated_103_residues
MCVGIPVQVLRSEETRALCRDRDGSDVWVDLLLVGEQPPGTWLMCFLGAAREVIDADTAQRTLAALAALDTLMAGGDADL
DAAFADLVNREPELPDFLKPQTT
>Mature_103_residues
MCVGIPVQVLRSEETRALCRDRDGSDVWVDLLLVGEQPPGTWLMCFLGAAREVIDADTAQRTLAALAALDTLMAGGDADL
DAAFADLVNREPELPDFLKPQTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 11115; Mature: 11115

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVGIPVQVLRSEETRALCRDRDGSDVWVDLLLVGEQPPGTWLMCFLGAAREVIDADTAQ
CCCCCCHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHH
RTLAALAALDTLMAGGDADLDAAFADLVNREPELPDFLKPQTT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCVGIPVQVLRSEETRALCRDRDGSDVWVDLLLVGEQPPGTWLMCFLGAAREVIDADTAQ
CCCCCCHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHH
RTLAALAALDTLMAGGDADLDAAFADLVNREPELPDFLKPQTT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7966281 [H]