Click here to switch to the map view.

The map label for this gene is ybiT [H]

Identifier: 119900068

GI number: 119900068

Start: 4140608

End: 4142233

Strand: Direct

Name: ybiT [H]

Synonym: azo3779

Alternate gene names: 119900068

Gene position: 4140608-4142233 (Clockwise)

Preceding gene: 119900067

Following gene: 119900069

Centisome position: 94.62

GC content: 63.16

Gene sequence:

>1626_bases
GTGCTCGTCGCAGCCAACATTACCCAACAGTTCGGGGCCAAGCCCCTGTTCGAGAACGTCTCCGTCAAGTTCGGCGACGG
CAACCGCTATGGCCTGATCGGCGCCAACGGCGCCGGCAAATCGACCTTCATGAAGATCCTGTGCGGGATCCTCGAATCGT
CCGCCGGCAACGTGTCCAAGGATCCGCACGAGCGCATGGCCTACTTGCGCCAGGACCAGTTCGCGTATGAAGAGATGCGC
GTGCTCGACGTGGTGATGATGGGCCACGAGGAACTGTGGGCGGCGATCAAGGAACGCGACGCGATCTACGCCAATCCTGA
AGCCACCGAAGACGACTACATGCACGCGGCCGAACTCGAAGGCAAGGTCGGCGAATACGACGGCTACACCGCCGAGGCGC
GCGCGGGCGAACTGCTGCTGGGCGTGGGCATCGGCAGCGAGTTGCACGACGGCCCGATGAAGAACGTCGCCCCCGGCTGG
AAGCTGCGGGTGCTGCTGTGCCAGGCGCTGTTCGCGAATCCGGACATCCTGCTGCTCGACGAGCCGACCAACAACCTCGA
CATCAACACCATCCGCTGGCTGGAGGACGTGCTCAACAACCGCGACTGCACGATGGTGATCATCTCCCACGACCGCCACT
TCCTGAACCAGGTCTGCACCCACATGGCCGACCTGGACTACGGCACCATCACCATCTACCCGGGCAACTACGACGACTAC
ATGGAAGCGTCGACGATGGCGCGCGAACGCCAGTCCGCCGCCAACGCCCGCGCCAAGGAAAAGATCTCCGAGCTGCAGGA
GTTCGTGCGCCGCTTCTCGGCCAACAAGTCCAAGGCCAAGCAGGCCACCAGCCGCCTGAAGCTGATCGACAAGCTCAAGC
CCGAGGACGTGAAGCCCTCCAGCCGCCAGTATCCGTGGATCCGCTTCGACTACGACGAGAAGGACAAGCTGCACCGCCTC
GCGTGCGAGGTCGACACCATCAGCTTCGCCTACGAGGGCATGGAAAAGCCGCTGATCAACAAGTTCTCGATCGCGATCGA
AGCGGGCGAGAAGGTGGCGATCATCGGTGAGAACGGCGTCGGCAAGACCACGCTGCTGAAGCTGCTGGTGGGCGAGCTGA
CGCCGCAGAAGGGCGCGGTGAAGTGGGCGGAAAAGGCCAAGACCGGCTACTACGCGCAGGACCACTCGGCCGACTTTGCC
GAGGATGTCAGCCTGACCGAATGGATCGCCGACTACTCGCGCATCACCGCAGCCGCCACCGGCGAGGACAACGAAACCCT
GCTGCGCGGCACGCTGGGCCGGCTGCTGTTCTCCGGCGACGACGTCAAGAAATCGGTCAAGGTGATTTCCGGCGGCGAAC
AGGGCCGCATGCTGTTCGGCAAGCTGATGCTGTCGCGCCCCAACGTGCTGCTGATGGACGAGCCGACCAACCACCTCGAC
ATGGAATCGATCGAGTCGCTCAACACCGGACTCGACAAGTTCAGCGGCACCCTGATCTTCGTGTCGCACGACCGCGAGTT
CGTGTCCTCGCTTGCCACCCGCATCATCGAGATCAAGCTCGACGGCCGGATCGTCGACTACCGCGGCACCTACGAGGAAT
ACCTCGCCAGCCAGGGTCTGGAATAA

Upstream 100 bases:

>100_bases
GAAGTGGCTGTAGCCCACCCTGCGGCAATCCGCGGGGACACCCCGCCGGGCATTGCGCTATAATGCAAGCCATTGTTTTG
TCTGAAAAACAGGATTTCCA

Downstream 100 bases:

>100_bases
ACCCCCGGCGGGGCTGCGTCCAGCGCCCCGCCCCCTCTTCCCCCGGACGCGCGCGCTGCGCGTCCGTCTTCGCGGGCCGT
TCATCGGCCCCATACCCCGC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MLVAANITQQFGAKPLFENVSVKFGDGNRYGLIGANGAGKSTFMKILCGILESSAGNVSKDPHERMAYLRQDQFAYEEMR
VLDVVMMGHEELWAAIKERDAIYANPEATEDDYMHAAELEGKVGEYDGYTAEARAGELLLGVGIGSELHDGPMKNVAPGW
KLRVLLCQALFANPDILLLDEPTNNLDINTIRWLEDVLNNRDCTMVIISHDRHFLNQVCTHMADLDYGTITIYPGNYDDY
MEASTMARERQSAANARAKEKISELQEFVRRFSANKSKAKQATSRLKLIDKLKPEDVKPSSRQYPWIRFDYDEKDKLHRL
ACEVDTISFAYEGMEKPLINKFSIAIEAGEKVAIIGENGVGKTTLLKLLVGELTPQKGAVKWAEKAKTGYYAQDHSADFA
EDVSLTEWIADYSRITAAATGEDNETLLRGTLGRLLFSGDDVKKSVKVISGGEQGRMLFGKLMLSRPNVLLMDEPTNHLD
MESIESLNTGLDKFSGTLIFVSHDREFVSSLATRIIEIKLDGRIVDYRGTYEEYLASQGLE

Sequences:

>Translated_541_residues
MLVAANITQQFGAKPLFENVSVKFGDGNRYGLIGANGAGKSTFMKILCGILESSAGNVSKDPHERMAYLRQDQFAYEEMR
VLDVVMMGHEELWAAIKERDAIYANPEATEDDYMHAAELEGKVGEYDGYTAEARAGELLLGVGIGSELHDGPMKNVAPGW
KLRVLLCQALFANPDILLLDEPTNNLDINTIRWLEDVLNNRDCTMVIISHDRHFLNQVCTHMADLDYGTITIYPGNYDDY
MEASTMARERQSAANARAKEKISELQEFVRRFSANKSKAKQATSRLKLIDKLKPEDVKPSSRQYPWIRFDYDEKDKLHRL
ACEVDTISFAYEGMEKPLINKFSIAIEAGEKVAIIGENGVGKTTLLKLLVGELTPQKGAVKWAEKAKTGYYAQDHSADFA
EDVSLTEWIADYSRITAAATGEDNETLLRGTLGRLLFSGDDVKKSVKVISGGEQGRMLFGKLMLSRPNVLLMDEPTNHLD
MESIESLNTGLDKFSGTLIFVSHDREFVSSLATRIIEIKLDGRIVDYRGTYEEYLASQGLE
>Mature_541_residues
MLVAANITQQFGAKPLFENVSVKFGDGNRYGLIGANGAGKSTFMKILCGILESSAGNVSKDPHERMAYLRQDQFAYEEMR
VLDVVMMGHEELWAAIKERDAIYANPEATEDDYMHAAELEGKVGEYDGYTAEARAGELLLGVGIGSELHDGPMKNVAPGW
KLRVLLCQALFANPDILLLDEPTNNLDINTIRWLEDVLNNRDCTMVIISHDRHFLNQVCTHMADLDYGTITIYPGNYDDY
MEASTMARERQSAANARAKEKISELQEFVRRFSANKSKAKQATSRLKLIDKLKPEDVKPSSRQYPWIRFDYDEKDKLHRL
ACEVDTISFAYEGMEKPLINKFSIAIEAGEKVAIIGENGVGKTTLLKLLVGELTPQKGAVKWAEKAKTGYYAQDHSADFA
EDVSLTEWIADYSRITAAATGEDNETLLRGTLGRLLFSGDDVKKSVKVISGGEQGRMLFGKLMLSRPNVLLMDEPTNHLD
MESIESLNTGLDKFSGTLIFVSHDREFVSSLATRIIEIKLDGRIVDYRGTYEEYLASQGLE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=537, Percent_Identity=31.6573556797021, Blast_Score=275, Evalue=6e-74,
Organism=Homo sapiens, GI10947137, Length=512, Percent_Identity=29.8828125, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI27881506, Length=512, Percent_Identity=29.8828125, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI69354671, Length=549, Percent_Identity=28.9617486338798, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI10947135, Length=550, Percent_Identity=28.9090909090909, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI30795238, Length=239, Percent_Identity=26.7782426778243, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI27881501, Length=239, Percent_Identity=26.7782426778243, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1787041, Length=541, Percent_Identity=64.8798521256932, Blast_Score=723, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=537, Percent_Identity=31.6573556797021, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1787182, Length=536, Percent_Identity=31.7164179104478, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI2367384, Length=523, Percent_Identity=30.5927342256214, Blast_Score=241, Evalue=7e-65,
Organism=Escherichia coli, GI1788165, Length=187, Percent_Identity=26.7379679144385, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1790525, Length=504, Percent_Identity=21.8253968253968, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1787029, Length=248, Percent_Identity=24.5967741935484, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI145693107, Length=559, Percent_Identity=22.5402504472272, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=24.5535714285714, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788225, Length=228, Percent_Identity=27.6315789473684, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787758, Length=193, Percent_Identity=25.3886010362694, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=27.4418604651163, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787370, Length=212, Percent_Identity=25.4716981132075, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1788761, Length=192, Percent_Identity=24.4791666666667, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=27.4678111587983, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=22.8971962616822, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789991, Length=228, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787164, Length=196, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=539, Percent_Identity=31.9109461966605, Blast_Score=255, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI17555318, Length=545, Percent_Identity=28.9908256880734, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=27.2058823529412, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI115533592, Length=197, Percent_Identity=26.9035532994924, Blast_Score=66, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=534, Percent_Identity=32.0224719101124, Blast_Score=272, Evalue=9e-74,
Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=30.7129798903108, Blast_Score=243, Evalue=4e-65,
Organism=Saccharomyces cerevisiae, GI6324314, Length=435, Percent_Identity=27.3563218390805, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6325030, Length=394, Percent_Identity=27.1573604060914, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6323278, Length=435, Percent_Identity=25.9770114942529, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24666836, Length=506, Percent_Identity=29.8418972332016, Blast_Score=255, Evalue=6e-68,
Organism=Drosophila melanogaster, GI24641342, Length=547, Percent_Identity=29.4332723948812, Blast_Score=237, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24642252, Length=542, Percent_Identity=29.3357933579336, Blast_Score=234, Evalue=9e-62,
Organism=Drosophila melanogaster, GI18859989, Length=542, Percent_Identity=29.3357933579336, Blast_Score=234, Evalue=9e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60420; Mature: 60420

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAANITQQFGAKPLFENVSVKFGDGNRYGLIGANGAGKSTFMKILCGILESSAGNVSK
CEEECCCHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
DPHERMAYLRQDQFAYEEMRVLDVVMMGHEELWAAIKERDAIYANPEATEDDYMHAAELE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHC
GKVGEYDGYTAEARAGELLLGVGIGSELHDGPMKNVAPGWKLRVLLCQALFANPDILLLD
CCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDINTIRWLEDVLNNRDCTMVIISHDRHFLNQVCTHMADLDYGTITIYPGNYDDY
CCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHH
MEASTMARERQSAANARAKEKISELQEFVRRFSANKSKAKQATSRLKLIDKLKPEDVKPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
SRQYPWIRFDYDEKDKLHRLACEVDTISFAYEGMEKPLINKFSIAIEAGEKVAIIGENGV
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCC
GKTTLLKLLVGELTPQKGAVKWAEKAKTGYYAQDHSADFAEDVSLTEWIADYSRITAAAT
CHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHHEEEEC
GEDNETLLRGTLGRLLFSGDDVKKSVKVISGGEQGRMLFGKLMLSRPNVLLMDEPTNHLD
CCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC
MESIESLNTGLDKFSGTLIFVSHDREFVSSLATRIIEIKLDGRIVDYRGTYEEYLASQGL
HHHHHHHHHCHHHHCCEEEEEECCHHHHHHHHHHEEEEEECCEEEECCCCHHHHHHHCCC
E
C
>Mature Secondary Structure
MLVAANITQQFGAKPLFENVSVKFGDGNRYGLIGANGAGKSTFMKILCGILESSAGNVSK
CEEECCCHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
DPHERMAYLRQDQFAYEEMRVLDVVMMGHEELWAAIKERDAIYANPEATEDDYMHAAELE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHC
GKVGEYDGYTAEARAGELLLGVGIGSELHDGPMKNVAPGWKLRVLLCQALFANPDILLLD
CCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDINTIRWLEDVLNNRDCTMVIISHDRHFLNQVCTHMADLDYGTITIYPGNYDDY
CCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHH
MEASTMARERQSAANARAKEKISELQEFVRRFSANKSKAKQATSRLKLIDKLKPEDVKPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
SRQYPWIRFDYDEKDKLHRLACEVDTISFAYEGMEKPLINKFSIAIEAGEKVAIIGENGV
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCC
GKTTLLKLLVGELTPQKGAVKWAEKAKTGYYAQDHSADFAEDVSLTEWIADYSRITAAAT
CHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHHEEEEC
GEDNETLLRGTLGRLLFSGDDVKKSVKVISGGEQGRMLFGKLMLSRPNVLLMDEPTNHLD
CCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC
MESIESLNTGLDKFSGTLIFVSHDREFVSSLATRIIEIKLDGRIVDYRGTYEEYLASQGL
HHHHHHHHHCHHHHCCEEEEEECCHHHHHHHHHHEEEEEECCEEEECCCCHHHHHHHCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]