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The map label for this gene is dcrH3

Identifier: 119900047

GI number: 119900047

Start: 4116808

End: 4117332

Strand: Direct

Name: dcrH3

Synonym: azo3758

Alternate gene names: NA

Gene position: 4116808-4117332 (Clockwise)

Preceding gene: 119900040

Following gene: 119900049

Centisome position: 94.08

GC content: 63.05

Gene sequence:

>525_bases
GTGAAACATGACCGCGCTATAATCATGGGCTTCCGTCAGCCCACCAGCCTACCCCTGGAGAACACCGTGCCCATCACTTG
GACGAGCGACCTCGACACCGGGATCGCCGTGATCGACCAGCAGCACATGCGCATCGTCGACTACATCAACCAGATGGAAC
ACGCGCAACAGAAGCAGGACCGCGGCCTGGTCGGCCGCGTGCTGGACGAGCTGGTCGATTACACCCTGTCGCATTTCGCC
TTCGAGGAAAGCCTGCAGGAAGAAGCCGGCTACCCCTACCTGAAGCCGCACCGCAAGGTGCACGAACTCTTCGTGCGCCG
GGTCAACGAATACCGCGAGCGTTTTTCCAGGGGCGAGGAGATCGCCGAGGAAATCCACACGCTGCTCAGCGCCTGGCTGA
TCAACCACATCAAGCGCGACGACGCCGACTACGTGGGTGCGGTGCGGCCGCGCATGGTTGCGCTGGTCAGCGACCAGCGC
AAGGAAGGCTGGCTGGCACGCTCGCTGGGCCGCTTCTTCCGCTGA

Upstream 100 bases:

>100_bases
GGCGCATTCTCGTGAGGGTGCCTGCCGGGGTCAAGGCAAGGGCGCGCGGCCCCTCGCCCGCATTCTGTCTCTATGCGCGC
ATGAATATTTCAAAAGCATC

Downstream 100 bases:

>100_bases
ACAGGCGGGCGCCGGCCGTGTGCGATGTACGACAAACGGCCGACGCGGACTTCACCCGAGGCGGGCGAAGAAGCGCCCGA
GCAGCGACGAGCTGCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKHDRAIIMGFRQPTSLPLENTVPITWTSDLDTGIAVIDQQHMRIVDYINQMEHAQQKQDRGLVGRVLDELVDYTLSHFA
FEESLQEEAGYPYLKPHRKVHELFVRRVNEYRERFSRGEEIAEEIHTLLSAWLINHIKRDDADYVGAVRPRMVALVSDQR
KEGWLARSLGRFFR

Sequences:

>Translated_174_residues
MKHDRAIIMGFRQPTSLPLENTVPITWTSDLDTGIAVIDQQHMRIVDYINQMEHAQQKQDRGLVGRVLDELVDYTLSHFA
FEESLQEEAGYPYLKPHRKVHELFVRRVNEYRERFSRGEEIAEEIHTLLSAWLINHIKRDDADYVGAVRPRMVALVSDQR
KEGWLARSLGRFFR
>Mature_174_residues
MKHDRAIIMGFRQPTSLPLENTVPITWTSDLDTGIAVIDQQHMRIVDYINQMEHAQQKQDRGLVGRVLDELVDYTLSHFA
FEESLQEEAGYPYLKPHRKVHELFVRRVNEYRERFSRGEEIAEEIHTLLSAWLINHIKRDDADYVGAVRPRMVALVSDQR
KEGWLARSLGRFFR

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 20474; Mature: 20474

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHDRAIIMGFRQPTSLPLENTVPITWTSDLDTGIAVIDQQHMRIVDYINQMEHAQQKQD
CCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLVGRVLDELVDYTLSHFAFEESLQEEAGYPYLKPHRKVHELFVRRVNEYRERFSRGEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IAEEIHTLLSAWLINHIKRDDADYVGAVRPRMVALVSDQRKEGWLARSLGRFFR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHDRAIIMGFRQPTSLPLENTVPITWTSDLDTGIAVIDQQHMRIVDYINQMEHAQQKQD
CCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLVGRVLDELVDYTLSHFAFEESLQEEAGYPYLKPHRKVHELFVRRVNEYRERFSRGEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IAEEIHTLLSAWLINHIKRDDADYVGAVRPRMVALVSDQRKEGWLARSLGRFFR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA