Definition | Azoarcus sp. BH72 chromosome, complete genome. |
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Accession | NC_008702 |
Length | 4,376,040 |
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The map label for this gene is yidY [C]
Identifier: 119899982
GI number: 119899982
Start: 4054347
End: 4055573
Strand: Direct
Name: yidY [C]
Synonym: azo3693
Alternate gene names: 119899982
Gene position: 4054347-4055573 (Clockwise)
Preceding gene: 119899981
Following gene: 119899983
Centisome position: 92.65
GC content: 73.11
Gene sequence:
>1227_bases GTGATCGGCCGCCTGCCGCTGCTCTGCGTCGGCCTCGGCCAGCTGGTGAGCTGGGGCCTGTTCTATTACCTGATCGGCTG CTTCGGCGAACGCATCGCCGCCGACCTCGGGTGGTCGCTCGCGCGCGTGCATGCCGGCTTCTCGGCCGCGCTGGTGGTGA TGGGGCTGATCTCGCCGCTGGTGGGGCGCCGCATCCAGGCGCACGGCGGGCGCCCGGTGCTGGTCGCAGGTTCGCTGGCG GGCGCGCTCGGCTGCGCGCTGCTGGGTGTCGCGCACGACGCGTTCGTCTACTACGCGGCCTGGCTGCTGCTCGGGGTGGC GATGCGGTGCACGCTGTACGACGCCGCCTTCGCCGCGCTGGCCCGCATCGGGGGCGCCGCAGCGCGCGGGCCGATGGCGC AGATCACGCTGCTCGGCGGGCTGGCGTCGACGGTGTTCTGGCCGGTCGGCGACGCCCTCGCGGCGCAGTTCGGCTGGCGC GGGGCGATGTACGCCTACGCCGCGATCGCGCTCGCCTCCATTCCGCTGCATTTCGCGCTGCCACGCGGACGGGCGCCGGC AGCGCCGGCCGCCGGCAGCGGCGCGGGCTTTGCCGCCAGCGCGGCCGACGCCCGCCGCGCCGCCCTGTTGTACGCGTTGA TCATCACGATCACCGGCTTTCTTGCGGCGGCAATGTCGGCCCACATGATCACACTGCTCACCGGCCTCGGCGTCGCGGCG CCGGTCGCGGTCGCCATCGGCGCACTGCGCGGCGTGGGGCAGTCGATTGCGCGGCTGGGCGAAATCCTGTCCGGCGGGCG GTTGTCGCCGCCGGCGCTCAACCTGTTCGCCTGCGCGCTGCTGCCGGCCAGCTTCGCTGCCGCCTTTGTCAGCGGACAAT GGCTTGCAGCCGGGGTGGCATTCGCCTTTCTATACGGCGCCGGCAACGGCTTGCTGACGATCACGCGCGGCACGCTGCCG CTGGTGCTGTTCGATCCGGCGACCTACGGCTCGCTGGTGGGCCGGCTGCTGGCCCCCGGTTTCGTGATCTCGGCCGCGGC GCCCTTGCTGTTCGCGCTGCTGATCGAGCACTGGGGCGAGGGCGCCGCGCTGGCGCTGTGCATGCTGCTGGCGCTGCTGA TCACCGCCGCGGCCAGGTCGCGCACGCCGAAGCGCGGATCGCGCGCCTTCAGCCAGTCGTCGAAGCTTTCGTTGCTCGGC GCGGTATGGCGGCCGTCGCGCATGTAG
Upstream 100 bases:
>100_bases GCCCGGCCGGCACGCTCACCGCGGTGGGTTACAAGCTCGGCCACTGGGTCGATACCGTGCTGATGCAGCGCGCGCTCGGC GCCGGCGCGCAGACGCCGCC
Downstream 100 bases:
>100_bases GGGCCGTAGCAATACACCACACCGCCGGGAGCCAGCACGCGCGCAGCGCCGGCGAACAGCGCCGGGGTACTGTCCCACGG CGAGTAATGGATCATGTTGA
Product: hypothetical protein
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Facilitator Superfamily MFS_1 Domain-Containing Protein; Facilitator Superfamily Transporter Transmembrane Protein; Transmembrane Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MIGRLPLLCVGLGQLVSWGLFYYLIGCFGERIAADLGWSLARVHAGFSAALVVMGLISPLVGRRIQAHGGRPVLVAGSLA GALGCALLGVAHDAFVYYAAWLLLGVAMRCTLYDAAFAALARIGGAAARGPMAQITLLGGLASTVFWPVGDALAAQFGWR GAMYAYAAIALASIPLHFALPRGRAPAAPAAGSGAGFAASAADARRAALLYALIITITGFLAAAMSAHMITLLTGLGVAA PVAVAIGALRGVGQSIARLGEILSGGRLSPPALNLFACALLPASFAAAFVSGQWLAAGVAFAFLYGAGNGLLTITRGTLP LVLFDPATYGSLVGRLLAPGFVISAAAPLLFALLIEHWGEGAALALCMLLALLITAAARSRTPKRGSRAFSQSSKLSLLG AVWRPSRM
Sequences:
>Translated_408_residues MIGRLPLLCVGLGQLVSWGLFYYLIGCFGERIAADLGWSLARVHAGFSAALVVMGLISPLVGRRIQAHGGRPVLVAGSLA GALGCALLGVAHDAFVYYAAWLLLGVAMRCTLYDAAFAALARIGGAAARGPMAQITLLGGLASTVFWPVGDALAAQFGWR GAMYAYAAIALASIPLHFALPRGRAPAAPAAGSGAGFAASAADARRAALLYALIITITGFLAAAMSAHMITLLTGLGVAA PVAVAIGALRGVGQSIARLGEILSGGRLSPPALNLFACALLPASFAAAFVSGQWLAAGVAFAFLYGAGNGLLTITRGTLP LVLFDPATYGSLVGRLLAPGFVISAAAPLLFALLIEHWGEGAALALCMLLALLITAAARSRTPKRGSRAFSQSSKLSLLG AVWRPSRM >Mature_408_residues MIGRLPLLCVGLGQLVSWGLFYYLIGCFGERIAADLGWSLARVHAGFSAALVVMGLISPLVGRRIQAHGGRPVLVAGSLA GALGCALLGVAHDAFVYYAAWLLLGVAMRCTLYDAAFAALARIGGAAARGPMAQITLLGGLASTVFWPVGDALAAQFGWR GAMYAYAAIALASIPLHFALPRGRAPAAPAAGSGAGFAASAADARRAALLYALIITITGFLAAAMSAHMITLLTGLGVAA PVAVAIGALRGVGQSIARLGEILSGGRLSPPALNLFACALLPASFAAAFVSGQWLAAGVAFAFLYGAGNGLLTITRGTLP LVLFDPATYGSLVGRLLAPGFVISAAAPLLFALLIEHWGEGAALALCMLLALLITAAARSRTPKRGSRAFSQSSKLSLLG AVWRPSRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41520; Mature: 41520
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRLPLLCVGLGQLVSWGLFYYLIGCFGERIAADLGWSLARVHAGFSAALVVMGLISPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VGRRIQAHGGRPVLVAGSLAGALGCALLGVAHDAFVYYAAWLLLGVAMRCTLYDAAFAAL HCCHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIGGAAARGPMAQITLLGGLASTVFWPVGDALAAQFGWRGAMYAYAAIALASIPLHFAL HHHCCHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHEEC PRGRAPAAPAAGSGAGFAASAADARRAALLYALIITITGFLAAAMSAHMITLLTGLGVAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH PVAVAIGALRGVGQSIARLGEILSGGRLSPPALNLFACALLPASFAAAFVSGQWLAAGVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FAFLYGAGNGLLTITRGTLPLVLFDPATYGSLVGRLLAPGFVISAAAPLLFALLIEHWGE HHHHHHCCCCEEEEECCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC GAALALCMLLALLITAAARSRTPKRGSRAFSQSSKLSLLGAVWRPSRM CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MIGRLPLLCVGLGQLVSWGLFYYLIGCFGERIAADLGWSLARVHAGFSAALVVMGLISPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VGRRIQAHGGRPVLVAGSLAGALGCALLGVAHDAFVYYAAWLLLGVAMRCTLYDAAFAAL HCCHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIGGAAARGPMAQITLLGGLASTVFWPVGDALAAQFGWRGAMYAYAAIALASIPLHFAL HHHCCHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHEEC PRGRAPAAPAAGSGAGFAASAADARRAALLYALIITITGFLAAAMSAHMITLLTGLGVAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH PVAVAIGALRGVGQSIARLGEILSGGRLSPPALNLFACALLPASFAAAFVSGQWLAAGVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FAFLYGAGNGLLTITRGTLPLVLFDPATYGSLVGRLLAPGFVISAAAPLLFALLIEHWGE HHHHHHCCCCEEEEECCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC GAALALCMLLALLITAAARSRTPKRGSRAFSQSSKLSLLGAVWRPSRM CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA