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The map label for this gene is fdhD [H]

Identifier: 119899777

GI number: 119899777

Start: 3829147

End: 3830031

Strand: Direct

Name: fdhD [H]

Synonym: azo3488

Alternate gene names: 119899777

Gene position: 3829147-3830031 (Clockwise)

Preceding gene: 119899763

Following gene: 119899778

Centisome position: 87.5

GC content: 68.7

Gene sequence:

>885_bases
ATGGCCGGGGGCGCCGAAGCCGCTACAATCCGCCGCATTCCCCTACTGCCGCAGACCATGGCCCCACCCTCCTACCGTCC
CGTCCTGAGCCAGGCCAGCCGTCCGCTCACGGTCACCATCCCGGCGGTGAACGAGCACGGCGAAAGCGTGCCCACCGCGA
TCGCCGGCGAGCATCCGCTGACGATCTACGTCGACAAGCGCGAGATCGTCACGCTGATGACGCTGGGCGCCGCGCCCGAG
GCGCTGACCCTGGGCTGGTTGCGCAACCAGCGCCTGGTGCGCACGCTGGAGGACATCGTGGCGGTGCAGGTGGACTGGGA
GGTGAACGCGGTGGCGGTGACCACCCGTCACGGCCTGCAGGACGCCGACGAACGCCTGGGCAGCCGCACCGTGACCACCG
GCTGCGGGCAGGGCACGGTGTTCGGCGGGCTGATGGACGAGATCGACAGCATCCGCCTGCCGGCGACGCGCACGCTGTCA
CAGGCGACGCTGTACGCCCTGATGGACGCGGTGCGCCACCACGAATCCATCTACAAGCAGGCCGGCGCGGTGCATGGCTG
CGCGCTGGCGCAGGCACGGCCGGACGGCTGCGAGATTCTGATGTTCGTCGAGGATGTCGGCCGCCACAACGCGGTCGACG
CGATCGCCGGCCGGATGTGGCTGGACGGCCTCGAAGGCGGCGACAAGATCTTCTACACCACCGGGCGGCTGACCTCCGAG
ATGGTGATCAAGACCGCACAGATGGGCATCCCTTTCCTGGTGTCGCGCTCCGGGCTCACGCAGATGGGCTGGGACATCGC
GCGCCGCATCGGCATCACCATGATCGGCCGCGCCCAAGGCAAGCACTACCTACTGTTTTCCGGCGAGGAGCACTTCACCC
GATGA

Upstream 100 bases:

>100_bases
GGGAGAAATCCTGACGGCGGCGGGTTGCGTTTACAGCATACGTCAGCCCCGGCCGCGCCGACACGTCGGCAAACCCGCCC
CGCCGTTGCGGGCGGCGCGC

Downstream 100 bases:

>100_bases
GCACGCACAACGCGAATACGGCCGCCGGCCAGACCGGCATCACCGGGGTGCTGCTGGCCGGCGGCCAGGGCAGCCGCATG
GGCGGGGTCGACAAGGGTCT

Product: putative formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MAGGAEAATIRRIPLLPQTMAPPSYRPVLSQASRPLTVTIPAVNEHGESVPTAIAGEHPLTIYVDKREIVTLMTLGAAPE
ALTLGWLRNQRLVRTLEDIVAVQVDWEVNAVAVTTRHGLQDADERLGSRTVTTGCGQGTVFGGLMDEIDSIRLPATRTLS
QATLYALMDAVRHHESIYKQAGAVHGCALAQARPDGCEILMFVEDVGRHNAVDAIAGRMWLDGLEGGDKIFYTTGRLTSE
MVIKTAQMGIPFLVSRSGLTQMGWDIARRIGITMIGRAQGKHYLLFSGEEHFTR

Sequences:

>Translated_294_residues
MAGGAEAATIRRIPLLPQTMAPPSYRPVLSQASRPLTVTIPAVNEHGESVPTAIAGEHPLTIYVDKREIVTLMTLGAAPE
ALTLGWLRNQRLVRTLEDIVAVQVDWEVNAVAVTTRHGLQDADERLGSRTVTTGCGQGTVFGGLMDEIDSIRLPATRTLS
QATLYALMDAVRHHESIYKQAGAVHGCALAQARPDGCEILMFVEDVGRHNAVDAIAGRMWLDGLEGGDKIFYTTGRLTSE
MVIKTAQMGIPFLVSRSGLTQMGWDIARRIGITMIGRAQGKHYLLFSGEEHFTR
>Mature_293_residues
AGGAEAATIRRIPLLPQTMAPPSYRPVLSQASRPLTVTIPAVNEHGESVPTAIAGEHPLTIYVDKREIVTLMTLGAAPEA
LTLGWLRNQRLVRTLEDIVAVQVDWEVNAVAVTTRHGLQDADERLGSRTVTTGCGQGTVFGGLMDEIDSIRLPATRTLSQ
ATLYALMDAVRHHESIYKQAGAVHGCALAQARPDGCEILMFVEDVGRHNAVDAIAGRMWLDGLEGGDKIFYTTGRLTSEM
VIKTAQMGIPFLVSRSGLTQMGWDIARRIGITMIGRAQGKHYLLFSGEEHFTR

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=249, Percent_Identity=28.9156626506024, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31939; Mature: 31808

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGAEAATIRRIPLLPQTMAPPSYRPVLSQASRPLTVTIPAVNEHGESVPTAIAGEHPL
CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCE
TIYVDKREIVTLMTLGAAPEALTLGWLRNQRLVRTLEDIVAVQVDWEVNAVAVTTRHGLQ
EEEECCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEECCCCC
DADERLGSRTVTTGCGQGTVFGGLMDEIDSIRLPATRTLSQATLYALMDAVRHHESIYKQ
HHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGAVHGCALAQARPDGCEILMFVEDVGRHNAVDAIAGRMWLDGLEGGDKIFYTTGRLTSE
HCCHHHEEHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
MVIKTAQMGIPFLVSRSGLTQMGWDIARRIGITMIGRAQGKHYLLFSGEEHFTR
HHHHHHHCCCCEEEECCCCHHHHHHHHHHHCEEEEEECCCCEEEEECCCHHCCC
>Mature Secondary Structure 
AGGAEAATIRRIPLLPQTMAPPSYRPVLSQASRPLTVTIPAVNEHGESVPTAIAGEHPL
CCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCEECCCCCE
TIYVDKREIVTLMTLGAAPEALTLGWLRNQRLVRTLEDIVAVQVDWEVNAVAVTTRHGLQ
EEEECCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEECCCCC
DADERLGSRTVTTGCGQGTVFGGLMDEIDSIRLPATRTLSQATLYALMDAVRHHESIYKQ
HHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGAVHGCALAQARPDGCEILMFVEDVGRHNAVDAIAGRMWLDGLEGGDKIFYTTGRLTSE
HCCHHHEEHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
MVIKTAQMGIPFLVSRSGLTQMGWDIARRIGITMIGRAQGKHYLLFSGEEHFTR
HHHHHHHCCCCEEEECCCCHHHHHHHHHHHCEEEEEECCCCEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]