| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is prpC [H]
Identifier: 119897293
GI number: 119897293
Start: 1076945
End: 1077721
Strand: Direct
Name: prpC [H]
Synonym: azo1002
Alternate gene names: 119897293
Gene position: 1076945-1077721 (Clockwise)
Preceding gene: 119897292
Following gene: 119897294
Centisome position: 24.61
GC content: 66.28
Gene sequence:
>777_bases ATGCCGCTGATTGCCGAAACCTGCGTCGCCCGCCACACCGGGGACAGGAAGGAGCAGCAGGACCGCGTCGCCCTGTTTGC CCATCCCACCGAAACCGGGACCCTGCTGGCCGTGCTCGCCGACGGCATGGGCGGCCATTCCGGCGGGGCAATGGCGGCCG AGCAGGTCACGATCAAGGCCAAGCAGAACTTCGAGGCTTTTCAGCCCGCGCATGAAACCGGCCGCCACTTGCTCCAGAGC ATCGTCGATGAGGCGCATGTCGTCATCAAGCTGACCCGCTTCACCAGCGAGCAGGATCCGCACAGCACCGCGGTGGTCTT CCTGATGCAGCCGGGTAAGGCGGCGTGGGCTCACTGCGGCGATTCGCGCCTGTACCACTTCCGCGGACGCGAACCCTGCT TTCGCACGCAGGATCACTCGCTGGTGGGCGAGATGCTGCGCAAGGGCCGGCTCGACGAAGCCGGCGCGCTCAATCACCCG CAACGCAACGTGCTGCTGTCCTGCCTGGGCAGCGAGCGCGAACCGCGTGTCGAGTACGGGGAGACGGACACGCTGATGGC AGGCGACAGCTTCCTGCTGTGTTCCGACGGGCTGTGGTCCTATTTTTCCGACGACGAACTCGGCCTGGTGGTGGACAACC ACCGCCCGCGCGAAGCCGCGCAACTGCTGATCGACCTTGCGCGCAGCCGCGCCGGCGGTTATGGCGACAATATTTCGCTC GCGCTGATCAAGCTCTCCGATCCCAAGTCCAGCCCCCGCCCCGCGTTCATCGGCTGA
Upstream 100 bases:
>100_bases CACAAACGGCATCCGGCGGCGGCTTTTCCGTGACCGGCGGCGGGGCGGGAGGGTGGGGTCATTGTTATGATGCGACTCAT AACCAATGATCTAGCCCTCC
Downstream 100 bases:
>100_bases GCCCGGCCGGCGCGGAATCAGGGAAATCCCCCATCCGTCTCATGGTTGTACGCAACCGCGTTCCCGGTAATATCCGGCGC AATGCGCGCCGCATCGTCGG
Product: putative phosphoprotein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPLIAETCVARHTGDRKEQQDRVALFAHPTETGTLLAVLADGMGGHSGGAMAAEQVTIKAKQNFEAFQPAHETGRHLLQS IVDEAHVVIKLTRFTSEQDPHSTAVVFLMQPGKAAWAHCGDSRLYHFRGREPCFRTQDHSLVGEMLRKGRLDEAGALNHP QRNVLLSCLGSEREPRVEYGETDTLMAGDSFLLCSDGLWSYFSDDELGLVVDNHRPREAAQLLIDLARSRAGGYGDNISL ALIKLSDPKSSPRPAFIG
Sequences:
>Translated_258_residues MPLIAETCVARHTGDRKEQQDRVALFAHPTETGTLLAVLADGMGGHSGGAMAAEQVTIKAKQNFEAFQPAHETGRHLLQS IVDEAHVVIKLTRFTSEQDPHSTAVVFLMQPGKAAWAHCGDSRLYHFRGREPCFRTQDHSLVGEMLRKGRLDEAGALNHP QRNVLLSCLGSEREPRVEYGETDTLMAGDSFLLCSDGLWSYFSDDELGLVVDNHRPREAAQLLIDLARSRAGGYGDNISL ALIKLSDPKSSPRPAFIG >Mature_257_residues PLIAETCVARHTGDRKEQQDRVALFAHPTETGTLLAVLADGMGGHSGGAMAAEQVTIKAKQNFEAFQPAHETGRHLLQSI VDEAHVVIKLTRFTSEQDPHSTAVVFLMQPGKAAWAHCGDSRLYHFRGREPCFRTQDHSLVGEMLRKGRLDEAGALNHPQ RNVLLSCLGSEREPRVEYGETDTLMAGDSFLLCSDGLWSYFSDDELGLVVDNHRPREAAQLLIDLARSRAGGYGDNISLA LIKLSDPKSSPRPAFIG
Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 28283; Mature: 28152
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIAETCVARHTGDRKEQQDRVALFAHPTETGTLLAVLADGMGGHSGGAMAAEQVTIKA CCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEHEEEEEE KQNFEAFQPAHETGRHLLQSIVDEAHVVIKLTRFTSEQDPHSTAVVFLMQPGKAAWAHCG CCCCHHHCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHCCC DSRLYHFRGREPCFRTQDHSLVGEMLRKGRLDEAGALNHPQRNVLLSCLGSEREPRVEYG CCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC ETDTLMAGDSFLLCSDGLWSYFSDDELGLVVDNHRPREAAQLLIDLARSRAGGYGDNISL CCCEEEECCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEE ALIKLSDPKSSPRPAFIG EEEEECCCCCCCCCCCCC >Mature Secondary Structure PLIAETCVARHTGDRKEQQDRVALFAHPTETGTLLAVLADGMGGHSGGAMAAEQVTIKA CCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEHEEEEEE KQNFEAFQPAHETGRHLLQSIVDEAHVVIKLTRFTSEQDPHSTAVVFLMQPGKAAWAHCG CCCCHHHCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHCCC DSRLYHFRGREPCFRTQDHSLVGEMLRKGRLDEAGALNHPQRNVLLSCLGSEREPRVEYG CCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC ETDTLMAGDSFLLCSDGLWSYFSDDELGLVVDNHRPREAAQLLIDLARSRAGGYGDNISL CCCEEEECCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEE ALIKLSDPKSSPRPAFIG EEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]