The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is 119776508

Identifier: 119776508

GI number: 119776508

Start: 4005077

End: 4005964

Strand: Direct

Name: 119776508

Synonym: Sama_3376

Alternate gene names: NA

Gene position: 4005077-4005964 (Clockwise)

Preceding gene: 119776507

Following gene: 119776509

Centisome position: 93.01

GC content: 54.28

Gene sequence:

>888_bases
ATGCAAGTCAATCCCGAAGACAGAATCACCCCGCAGGAAGAAACCTCCCAGCGCAGCAACCGTCTGTCGGCCCTGCTGAT
CCTGGCTCTGATAGCCATTGCCGCCGGCCTATGGATGTATTTTACCCGCGCACCCGAGCCCGCGCCTGTGGTGGACGTGC
CGACAGAAGCCCCCCAGCCAACGCCTCTGCCCGAATCCGCGGTGACTGCAATCGAACCCGAACCCGAGCCGGAGCCTGAG
GCCCAGTTCGAGCCAGAACAAGTGACCAATACACCCGAAGAAGTCATACCTGAAGTCACTGTAGATCCCATTCCTGAGCT
GGCAGAAAGCGATACTTTTGCAACCCAAAAAGCTATCGCATTGGCCGGTAGTCTGCCGGTCGAACCCATCATTGCCCAGC
AAGATCTGGTACGCCACTTCGTGGTCTTTATGGATAACCTGGCCGAAGGCCAGCTGGCACGCAAACAAAGCCCACTCAAG
GGCCCTGAAACAAAATTCACCGTCAGCGAAATCACCGCCAAGACCTATTTAAACCCCGACAGCTACAAGCGCTACGATTT
GTATGCCAATTACATTGCCAATTTAAATGAAGAGAAACTGCTGGAAACTTATGCCCAGATGACACCCATGCTGGAGCAGG
CCTTCGATGAATTGGGTTACGGTAATGTCAGTTTCAAAGAACGCAGCCTCAAGGCCATCGATCAACTGCTGGCAGCACCC
ATCATCGAATCACCCATAGAACTGGTCACCTTCAGCGTCAACTACAAGTTTGCCGATCCCGAGCTGGAAGCCCTGCCACC
GGCACAGAAACTGATGATACGCATGGGCCCGACAAACAGTCGCAAGGTGAAAGCCGCGCTGAAGAAACTGCGGCCATTGT
TGCAATAA

Upstream 100 bases:

>100_bases
CTGCATTAAATATTGTTTTTGTTCAGCCTTGGACTATGGACATCGACCGGCGAACTGGGACAATGGGTGTTTCACGGGTC
AGTCGCAACAAGGAACCAAG

Downstream 100 bases:

>100_bases
AATCCTGTCTTTTAACAACTTGCCCCCGGATACCATGCGGTCTCCGGGGGCTTCTGTTATCAGGGTGTTTTGATATAGAA
TATTCAGTCCAAAATAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MQVNPEDRITPQEETSQRSNRLSALLILALIAIAAGLWMYFTRAPEPAPVVDVPTEAPQPTPLPESAVTAIEPEPEPEPE
AQFEPEQVTNTPEEVIPEVTVDPIPELAESDTFATQKAIALAGSLPVEPIIAQQDLVRHFVVFMDNLAEGQLARKQSPLK
GPETKFTVSEITAKTYLNPDSYKRYDLYANYIANLNEEKLLETYAQMTPMLEQAFDELGYGNVSFKERSLKAIDQLLAAP
IIESPIELVTFSVNYKFADPELEALPPAQKLMIRMGPTNSRKVKAALKKLRPLLQ

Sequences:

>Translated_295_residues
MQVNPEDRITPQEETSQRSNRLSALLILALIAIAAGLWMYFTRAPEPAPVVDVPTEAPQPTPLPESAVTAIEPEPEPEPE
AQFEPEQVTNTPEEVIPEVTVDPIPELAESDTFATQKAIALAGSLPVEPIIAQQDLVRHFVVFMDNLAEGQLARKQSPLK
GPETKFTVSEITAKTYLNPDSYKRYDLYANYIANLNEEKLLETYAQMTPMLEQAFDELGYGNVSFKERSLKAIDQLLAAP
IIESPIELVTFSVNYKFADPELEALPPAQKLMIRMGPTNSRKVKAALKKLRPLLQ
>Mature_295_residues
MQVNPEDRITPQEETSQRSNRLSALLILALIAIAAGLWMYFTRAPEPAPVVDVPTEAPQPTPLPESAVTAIEPEPEPEPE
AQFEPEQVTNTPEEVIPEVTVDPIPELAESDTFATQKAIALAGSLPVEPIIAQQDLVRHFVVFMDNLAEGQLARKQSPLK
GPETKFTVSEITAKTYLNPDSYKRYDLYANYIANLNEEKLLETYAQMTPMLEQAFDELGYGNVSFKERSLKAIDQLLAAP
IIESPIELVTFSVNYKFADPELEALPPAQKLMIRMGPTNSRKVKAALKKLRPLLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32795; Mature: 32795

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVNPEDRITPQEETSQRSNRLSALLILALIAIAAGLWMYFTRAPEPAPVVDVPTEAPQP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
TPLPESAVTAIEPEPEPEPEAQFEPEQVTNTPEEVIPEVTVDPIPELAESDTFATQKAIA
CCCCCHHEECCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCHHHHCCCHHHHHHHHH
LAGSLPVEPIIAQQDLVRHFVVFMDNLAEGQLARKQSPLKGPETKFTVSEITAKTYLNPD
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCC
SYKRYDLYANYIANLNEEKLLETYAQMTPMLEQAFDELGYGNVSFKERSLKAIDQLLAAP
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IIESPIELVTFSVNYKFADPELEALPPAQKLMIRMGPTNSRKVKAALKKLRPLLQ
HHHCCCEEEEEEEEEEECCCCCHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQVNPEDRITPQEETSQRSNRLSALLILALIAIAAGLWMYFTRAPEPAPVVDVPTEAPQP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
TPLPESAVTAIEPEPEPEPEAQFEPEQVTNTPEEVIPEVTVDPIPELAESDTFATQKAIA
CCCCCHHEECCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCHHHHCCCHHHHHHHHH
LAGSLPVEPIIAQQDLVRHFVVFMDNLAEGQLARKQSPLKGPETKFTVSEITAKTYLNPD
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCC
SYKRYDLYANYIANLNEEKLLETYAQMTPMLEQAFDELGYGNVSFKERSLKAIDQLLAAP
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IIESPIELVTFSVNYKFADPELEALPPAQKLMIRMGPTNSRKVKAALKKLRPLLQ
HHHCCCEEEEEEEEEEECCCCCHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA