The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776461

Identifier: 119776461

GI number: 119776461

Start: 3957046

End: 3957621

Strand: Direct

Name: 119776461

Synonym: Sama_3329

Alternate gene names: NA

Gene position: 3957046-3957621 (Clockwise)

Preceding gene: 119776460

Following gene: 119776465

Centisome position: 91.89

GC content: 55.38

Gene sequence:

>576_bases
ATGAAATCATTCAAGCATTTGTTGCTTGCTACTCTGATGCTGCTCGGTATTGGACAAGCCTTCGCCGCCGAGGATGACGT
CAAATATCAGGATGCACTTGCCACCTTTAAGCAAGCCAGTGAAACCCACAAGTTTTTCAATAATGCCTACGGCTATGCCC
TGTTCCCCACCATAGGCAAGGGGGGTATAGGTATCGGCGCCGCCTACGGCAAGGGCCGGGTTTATCGACAGGGTGCCTAT
GTGGGCGACTCCAGCATGACCCAGGTTTCCATTGGCTTCCAACTGGGGGGCCAGGCCTACAGCGAGATTATTTTCTTTAA
AGATGAAAAGGCCTTTCGCGACTTTACCAGCGGCAGCTTTGAGTTCAGTGGTCAGGCGTCCGCCGTGGCCATCAACGTGG
GTGCCAATGCCCAGGCAGGCACCACGGGTAACTCGGCCGGTGCAGGTCAGGCAGGCGGCGCCCAAAATGCCACCGCAGCC
TATATCAATGGCATGACTGTATTTACCGCAGCCAAGGGTGGATTGATGTTTGAAGCCGCCCTGGCGGGCCAGTCGTTCAC
CTTCGAAGGCAAGTAG

Upstream 100 bases:

>100_bases
AAGCGCCTTTCGGGGCGCTTTTTTACTGAATGCTATTCACTTTTTCTGCTCCATGCCTATGCTGGTGTCAGTCACCCCCT
CACCCGAAAAGGAGAGTTCC

Downstream 100 bases:

>100_bases
CCGGTAAAAATACTCAGAGTAAAAAGGCGACCCTTGGGTCGCCTTTTTCATTAATGCCTGTTGTGCATAACCGCGTCAGT
TATAAGCGCGTTAGTCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKSFKHLLLATLMLLGIGQAFAAEDDVKYQDALATFKQASETHKFFNNAYGYALFPTIGKGGIGIGAAYGKGRVYRQGAY
VGDSSMTQVSIGFQLGGQAYSEIIFFKDEKAFRDFTSGSFEFSGQASAVAINVGANAQAGTTGNSAGAGQAGGAQNATAA
YINGMTVFTAAKGGLMFEAALAGQSFTFEGK

Sequences:

>Translated_191_residues
MKSFKHLLLATLMLLGIGQAFAAEDDVKYQDALATFKQASETHKFFNNAYGYALFPTIGKGGIGIGAAYGKGRVYRQGAY
VGDSSMTQVSIGFQLGGQAYSEIIFFKDEKAFRDFTSGSFEFSGQASAVAINVGANAQAGTTGNSAGAGQAGGAQNATAA
YINGMTVFTAAKGGLMFEAALAGQSFTFEGK
>Mature_191_residues
MKSFKHLLLATLMLLGIGQAFAAEDDVKYQDALATFKQASETHKFFNNAYGYALFPTIGKGGIGIGAAYGKGRVYRQGAY
VGDSSMTQVSIGFQLGGQAYSEIIFFKDEKAFRDFTSGSFEFSGQASAVAINVGANAQAGTTGNSAGAGQAGGAQNATAA
YINGMTVFTAAKGGLMFEAALAGQSFTFEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19806; Mature: 19806

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFKHLLLATLMLLGIGQAFAAEDDVKYQDALATFKQASETHKFFNNAYGYALFPTIGK
CCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
GGIGIGAAYGKGRVYRQGAYVGDSSMTQVSIGFQLGGQAYSEIIFFKDEKAFRDFTSGSF
CCCEEEEECCCCEEEECCCEECCCCCEEEEEEEEECCHHHEEEEEEECCHHHHHCCCCCE
EFSGQASAVAINVGANAQAGTTGNSAGAGQAGGAQNATAAYINGMTVFTAAKGGLMFEAA
EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEEEEE
LAGQSFTFEGK
CCCCEEEECCC
>Mature Secondary Structure
MKSFKHLLLATLMLLGIGQAFAAEDDVKYQDALATFKQASETHKFFNNAYGYALFPTIGK
CCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
GGIGIGAAYGKGRVYRQGAYVGDSSMTQVSIGFQLGGQAYSEIIFFKDEKAFRDFTSGSF
CCCEEEEECCCCEEEECCCEECCCCCEEEEEEEEECCHHHEEEEEEECCHHHHHCCCCCE
EFSGQASAVAINVGANAQAGTTGNSAGAGQAGGAQNATAAYINGMTVFTAAKGGLMFEAA
EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEEEEE
LAGQSFTFEGK
CCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA