The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is 119776093

Identifier: 119776093

GI number: 119776093

Start: 3525771

End: 3526076

Strand: Reverse

Name: 119776093

Synonym: Sama_2961

Alternate gene names: NA

Gene position: 3526076-3525771 (Counterclockwise)

Preceding gene: 119776094

Following gene: 119776085

Centisome position: 81.88

GC content: 50.65

Gene sequence:

>306_bases
TTGGGTTCGAATGAGCTTTTAATTCACTCCGACCCCTTTATCCACATAAGCCGCGAGAGCGGCAGTTACACAGGTAAACG
GCGTATTCGCGGCGGCCGAGCCAGAGTGCGAACTGTGATGTTTATGGCCATGATGTCAGCCATCCAGTGCAACCCTATTT
TCAAACGCTACTACGAACACTTAAAGGCGCAGGGAAAGCTGCCCAAGGTGGCGATAATTGCTTGCATGCGGAAGCTCTTG
GTCACCCTCAATACCATGATGAAAAACGGAACTCGCTGGGGCGAAAAATCACCTGAATTGGCGTAA

Upstream 100 bases:

>100_bases
CCCTGCGGCCGCTTCGAGCGGGATTTGGTGCATTCCTCGGCAAAAGTGTTATGGCTGTCCTGTCTTTCGTCTGTGGGAGC
GTCCAGATATGTCCTGAGTT

Downstream 100 bases:

>100_bases
TAAATATTGACGGAATGCCACAGTCACTTGTTAGGCGATTTATCACAACAGATTACAATACACTCTGACAATCTTACCAT
CATATTTTTCAGCATATACT

Product: hypothetical protein

Products: NA

Alternate protein names: ISCps7 Transposase; ISSwp5 Transposase

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MGSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEHLKAQGKLPKVAIIACMRKLL
VTLNTMMKNGTRWGEKSPELA

Sequences:

>Translated_101_residues
MGSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEHLKAQGKLPKVAIIACMRKLL
VTLNTMMKNGTRWGEKSPELA
>Mature_100_residues
GSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEHLKAQGKLPKVAIIACMRKLLV
TLNTMMKNGTRWGEKSPELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11528; Mature: 11397

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEH
CCCCCEEEECCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LKAQGKLPKVAIIACMRKLLVTLNTMMKNGTRWGEKSPELA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEH
CCCCEEEECCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LKAQGKLPKVAIIACMRKLLVTLNTMMKNGTRWGEKSPELA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA