The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is pld [H]

Identifier: 119776056

GI number: 119776056

Start: 3478408

End: 3480177

Strand: Reverse

Name: pld [H]

Synonym: Sama_2924

Alternate gene names: 119776056

Gene position: 3480177-3478408 (Counterclockwise)

Preceding gene: 119776058

Following gene: 119776055

Centisome position: 80.82

GC content: 58.87

Gene sequence:

>1770_bases
ATGAAACGGTCTTATTCACGTCGTGACTTCCTGGCCATGTCGGCCAAAGGCGTTGGTGCCGCAGTGGTTTCCTATGGCCT
GATGGGCTGCTCCAGCAGCGATGATGATGCCCCATCTGTGCCGGTCAGCTTCGTTCACGGTGTTGCCAGTGGTGACCCGG
CCCATGACGCTGTCATCATCTGGACCCGGGTGACTCCCACCGGCGATGCCGACCTGACTGTCTCCTGGCAGGTGGCCAAA
GATGCCGACTTCAAAGAGCTGGTCACAGACGGCAGCACCATGACCAATAAAGACAGGGATTACACAGTCAAAGTGGATGC
CATGGGCCTTGCCGCCGGCAGCAGCTATTACTTCCGCTTTATGTGCGGCGACAAAACCTCGGCTGTGGGCAAAACCCGCA
CCCTGCCAGAGGGCGCCGTGTCCCAGGTGAAACTGGCGGTAATGAGCTGCGCCAACTTCCCGGCCGGTTACTTTAACGTT
TACGAGCTGGCAGCGGCCCAGGGTTCACTGGATGCGGTTGTGCATCTGGGCGACTATATCTACGAATATCCCCGTGGCGG
TTATGCCAGTGAAAACGCGGCGGCCATCGGCCGTGAGGTATTACCGGCCCATGAACTCCTGAGCCTGGGCGACTACCGTA
CCCGTTACGCTCAGTATCGCGGTGATGCCAGTCTGCAAAAGCTCCACGCCATGGTGCCCTTTATTACAGTGTGGGATGAC
CATGAAGTCTGTAACGATGCCTGGCGTGATGGCGCTGAAAACCACAATGAAGGCGAGGGCGACTTTGAGGCCCGTAAGCA
GGCGGCGCTGCAGGCTTACTTTGAATGGCTGCCTATTCGCCCATGGCGCGAAGGCAACCATGAAGAAATCTTCCGAAGCT
TTGCCTTTGGCGATCTGGTAGATCTGCACATGCTGGATACCCGTTTGCTTGGCCGTGATGAGCAGCTGCAGTTTGAAACC
TACCTTGACCCAGCCACTGGCGCCTTCGATGGCACCAGCTTTATGGCCGATGTCACCAGCACCAGCCGCACCATGCTGGG
CGCACTGCAGCTGCTGTGGCTGCAAAGCAAGTTACTGGCAAACGAAGCCAAATGGCAGGTACTGGGCCAACAGGTGTTGA
TGGGCAAGATGTTGTTGCCCGCGGCCATTGCCACCCAACAGCTGTCTATTCCTCAGTTTGCCGAGCTGGCCGGTCTGGCA
CAGCTCGCCGCCCGCGCTCAGGCGGGCGATCCTACCCTGACCCAAGAAGAGCTGATGTATCTGGCGGCCAACCAGCATAA
GCTGACGCCGGAAGTCATTGCCCTGCTGCAACTGCCATCCATTCCCTACAACCTCGATGCCTGGGACGGTTACGCCTACG
AGCGTGAGGTGATTCTGGGTACGGCCAGGTCGGTGAATGCCAATTTGGTGGTGCTGGCCGGTGATACCCACAACGCCTGG
GCCAACGAGCTCAAAGACGTGAACGGCGCCGCCGTTGGCGTGGAGTTTGCGACCAGCTCAGTGTCGTCGCCGGGGCTGGA
GTACTACCTGCAATTGCCGGCCGAACAAATTCCGGCCACCGAAGCGGCAGTGGTGGGGCTGGTGGACGACCTCAAGTACG
CCAACCTCAAGGACAGGGGCTTTATGGTACTGACCTTCACCCAGGAAGAAGTGCGCAGCGACTGGATTTATGTCTCGTCC
ATTCTGGAGAAAGATTTCACCGAGGCCACGGGCCGTGGCTACAGCGCCCGCACCCTGGCGGGCAGCCATGTGATAGAGGC
TGTGGTGTAA

Upstream 100 bases:

>100_bases
GCAAAACTCTACCAAGGGCGTCATGCTTGTGTAATAGTAATGTTGCAAACTAAGACTCATTGGACCTCATACCTCTCATA
TAACCAAAGGAATAATAATA

Downstream 100 bases:

>100_bases
TCCGCTTCCCGCTAACGGTGCTCGTCGCTAAAAAATCCACCCCAATGGGTGGATTTTTTTATGCTCAGTGGAGGAAATTC
TCCGGCTTGTTATGCTTGCA

Product: alkaline phosphatase

Products: NA

Alternate protein names: PLD [H]

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MKRSYSRRDFLAMSAKGVGAAVVSYGLMGCSSSDDDAPSVPVSFVHGVASGDPAHDAVIIWTRVTPTGDADLTVSWQVAK
DADFKELVTDGSTMTNKDRDYTVKVDAMGLAAGSSYYFRFMCGDKTSAVGKTRTLPEGAVSQVKLAVMSCANFPAGYFNV
YELAAAQGSLDAVVHLGDYIYEYPRGGYASENAAAIGREVLPAHELLSLGDYRTRYAQYRGDASLQKLHAMVPFITVWDD
HEVCNDAWRDGAENHNEGEGDFEARKQAALQAYFEWLPIRPWREGNHEEIFRSFAFGDLVDLHMLDTRLLGRDEQLQFET
YLDPATGAFDGTSFMADVTSTSRTMLGALQLLWLQSKLLANEAKWQVLGQQVLMGKMLLPAAIATQQLSIPQFAELAGLA
QLAARAQAGDPTLTQEELMYLAANQHKLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTARSVNANLVVLAGDTHNAW
ANELKDVNGAAVGVEFATSSVSSPGLEYYLQLPAEQIPATEAAVVGLVDDLKYANLKDRGFMVLTFTQEEVRSDWIYVSS
ILEKDFTEATGRGYSARTLAGSHVIEAVV

Sequences:

>Translated_589_residues
MKRSYSRRDFLAMSAKGVGAAVVSYGLMGCSSSDDDAPSVPVSFVHGVASGDPAHDAVIIWTRVTPTGDADLTVSWQVAK
DADFKELVTDGSTMTNKDRDYTVKVDAMGLAAGSSYYFRFMCGDKTSAVGKTRTLPEGAVSQVKLAVMSCANFPAGYFNV
YELAAAQGSLDAVVHLGDYIYEYPRGGYASENAAAIGREVLPAHELLSLGDYRTRYAQYRGDASLQKLHAMVPFITVWDD
HEVCNDAWRDGAENHNEGEGDFEARKQAALQAYFEWLPIRPWREGNHEEIFRSFAFGDLVDLHMLDTRLLGRDEQLQFET
YLDPATGAFDGTSFMADVTSTSRTMLGALQLLWLQSKLLANEAKWQVLGQQVLMGKMLLPAAIATQQLSIPQFAELAGLA
QLAARAQAGDPTLTQEELMYLAANQHKLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTARSVNANLVVLAGDTHNAW
ANELKDVNGAAVGVEFATSSVSSPGLEYYLQLPAEQIPATEAAVVGLVDDLKYANLKDRGFMVLTFTQEEVRSDWIYVSS
ILEKDFTEATGRGYSARTLAGSHVIEAVV
>Mature_589_residues
MKRSYSRRDFLAMSAKGVGAAVVSYGLMGCSSSDDDAPSVPVSFVHGVASGDPAHDAVIIWTRVTPTGDADLTVSWQVAK
DADFKELVTDGSTMTNKDRDYTVKVDAMGLAAGSSYYFRFMCGDKTSAVGKTRTLPEGAVSQVKLAVMSCANFPAGYFNV
YELAAAQGSLDAVVHLGDYIYEYPRGGYASENAAAIGREVLPAHELLSLGDYRTRYAQYRGDASLQKLHAMVPFITVWDD
HEVCNDAWRDGAENHNEGEGDFEARKQAALQAYFEWLPIRPWREGNHEEIFRSFAFGDLVDLHMLDTRLLGRDEQLQFET
YLDPATGAFDGTSFMADVTSTSRTMLGALQLLWLQSKLLANEAKWQVLGQQVLMGKMLLPAAIATQQLSIPQFAELAGLA
QLAARAQAGDPTLTQEELMYLAANQHKLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTARSVNANLVVLAGDTHNAW
ANELKDVNGAAVGVEFATSSVSSPGLEYYLQLPAEQIPATEAAVVGLVDDLKYANLKDRGFMVLTFTQEEVRSDWIYVSS
ILEKDFTEATGRGYSARTLAGSHVIEAVV

Specific function: Catalyzes the hydrolysis of the ester bond between the phosphatidic acid and alcohol moieties of phospholipids. Can catalyze a transphosphatidylation reaction in the presence of high concentrations of primary alcohols. Has also phosphatase activity toward

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 64323; Mature: 64323

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSYSRRDFLAMSAKGVGAAVVSYGLMGCSSSDDDAPSVPVSFVHGVASGDPAHDAVII
CCCCCCCCHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEE
WTRVTPTGDADLTVSWQVAKDADFKELVTDGSTMTNKDRDYTVKVDAMGLAAGSSYYFRF
EEEECCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEE
MCGDKTSAVGKTRTLPEGAVSQVKLAVMSCANFPAGYFNVYELAAAQGSLDAVVHLGDYI
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
YEYPRGGYASENAAAIGREVLPAHELLSLGDYRTRYAQYRGDASLQKLHAMVPFITVWDD
HHCCCCCCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCEEEEECC
HEVCNDAWRDGAENHNEGEGDFEARKQAALQAYFEWLPIRPWREGNHEEIFRSFAFGDLV
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
DLHMLDTRLLGRDEQLQFETYLDPATGAFDGTSFMADVTSTSRTMLGALQLLWLQSKLLA
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHH
NEAKWQVLGQQVLMGKMLLPAAIATQQLSIPQFAELAGLAQLAARAQAGDPTLTQEELMY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LAANQHKLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTARSVNANLVVLAGDTHNAW
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCHH
ANELKDVNGAAVGVEFATSSVSSPGLEYYLQLPAEQIPATEAAVVGLVDDLKYANLKDRG
HHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHCCCCCCCCCC
FMVLTFTQEEVRSDWIYVSSILEKDFTEATGRGYSARTLAGSHVIEAVV
EEEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCC
>Mature Secondary Structure
MKRSYSRRDFLAMSAKGVGAAVVSYGLMGCSSSDDDAPSVPVSFVHGVASGDPAHDAVII
CCCCCCCCHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEE
WTRVTPTGDADLTVSWQVAKDADFKELVTDGSTMTNKDRDYTVKVDAMGLAAGSSYYFRF
EEEECCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEE
MCGDKTSAVGKTRTLPEGAVSQVKLAVMSCANFPAGYFNVYELAAAQGSLDAVVHLGDYI
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
YEYPRGGYASENAAAIGREVLPAHELLSLGDYRTRYAQYRGDASLQKLHAMVPFITVWDD
HHCCCCCCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCEEEEECC
HEVCNDAWRDGAENHNEGEGDFEARKQAALQAYFEWLPIRPWREGNHEEIFRSFAFGDLV
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
DLHMLDTRLLGRDEQLQFETYLDPATGAFDGTSFMADVTSTSRTMLGALQLLWLQSKLLA
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHH
NEAKWQVLGQQVLMGKMLLPAAIATQQLSIPQFAELAGLAQLAARAQAGDPTLTQEELMY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LAANQHKLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTARSVNANLVVLAGDTHNAW
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCHH
ANELKDVNGAAVGVEFATSSVSSPGLEYYLQLPAEQIPATEAAVVGLVDDLKYANLKDRG
HHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHCCCCCCCCCC
FMVLTFTQEEVRSDWIYVSSILEKDFTEATGRGYSARTLAGSHVIEAVV
EEEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12441393 [H]