The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is ordL [H]

Identifier: 119776042

GI number: 119776042

Start: 3459837

End: 3461318

Strand: Reverse

Name: ordL [H]

Synonym: Sama_2910

Alternate gene names: 119776042

Gene position: 3461318-3459837 (Counterclockwise)

Preceding gene: 119776043

Following gene: 119776040

Centisome position: 80.38

GC content: 61.67

Gene sequence:

>1482_bases
GTGATTTCTTCTGTGGGTGGGCTCGATGAGAGCCTGTGGTATCTGACCCTTGGGGAACCCATGCTGCCCCGCGCTTCGCT
GGAAAATGATATCGAGGCGGATGTTTGCATTCTGGGCGCCGGGTACTCAGGCCTGTGGACGGCCCTGTTTCTCAAACAGA
AACAGCCTTCGCTGAAGGTGGTTGTGCTTGAAGCTGCCATGGCTGGAGAGGGGGCGTCCGGGCGCAACGGCGGTTGGCTG
ATGGGCAGCTTTGGCGGCGATTTGGGTTATCTGGCACAGCTGGATGGCGAGGCCCGGCGCCGGGCAAAAGCGCGCATTAC
CGGCACGGTTGCCCGGGCGGCCAATACCTTCAGCGAGCTGGGTATCCAATGCGACTTCCATCATGGCGGTAACCTGTATC
AGGCGGCGCGCTACCCCCAGCAGCTTAAGCGATTGCAAGCCGAGCTGGCGCATTTTCGTGAAGCCGGTTTTGACGAAGAA
GACTATCGCCTGCTGTCGGCCGCAGACGCCAGCCACGCCCTTAATCTGCCGGGGACACAAGCGGCGCTCTACACCCCTCA
CTGTGCCCGGGTGCATCCGCTGAAGCTGGCCCGGGGCCTTGCCCGGGCCGCCGAACGTGCCGGCGTGGTTATCTATGAGC
ACAGCCCTGTGCAGCTGGCTGAAAAAAGCAGGTTCACCCCCTCTGAAAGCGGCCTGAAAACCCAGAAAAACACCGTCTTT
ACCCCAAAGGGCTCGGTCAGGGCCGCTGTGGTGGTGGCCGCGCTCGAAGGCTACCAGCGGCTCCTGGGGCTTGATAACAG
AACCAGCCTGCCGGTGTTCAGTGTGCTCTGCGCCACCGAACCCCTGAGCGAACAGCAATGGGCCACTATCGGTCTTGAAA
ACCGCGAAACCTTTGCCGATGCCTCACGGCTTATCACCTACGGCCAGCGCAGCGCAGACAATCGCTTGGTATTTGGTGCA
CGCGGTGGCTATGGCTTTGGCGGCGCAGTGAAAACCCAATTTGGCTTTACGCCCCGCACGTTGGGTGAATCGCCAAGAGG
CGATATCTTTGACCTGAGAAGTCAGCTGTTGCAGGCGTTTTTCCCCGCCCTTGAGGGCACGCAAATCACCCATGGCTGGG
GCGGCTGTTTGTCGCTCTCGCGGGCGTTTAGGCCCCATGCACTCTTCGATGAAGCTGCGGGGCTTGCTTTTGTGGGCGGC
TATGGCGGCGAAGGCGTGGGCGCCAGCATGCTCTTTGGCGAAACCCTGGCCGAGCTGATTGCCCGGCCAGAGGGTGAGCT
CGCTGGTATGCCATGGGCGTACCGGGGCGCCGTGAGTGAGCATCTGCGCCGCTGGGAGTCGGAGCCACTTCCCTGGCTGG
GTTACAGCGCAAGCGGGCTGCTTTACCGGTTTGAAGAGCGCCTGCTCTGCCGCAAGCCTCAGCCAGGGTATACGCCTGTG
GTCAGTCGGCTTGCCGATGCCCTGGAAATCCTGATGAGTTAG

Upstream 100 bases:

>100_bases
GACCCATCAGCAGCGCCTGGATGGACACCCATGTGGACGAGGTCAAGAGCCTGCTGGGCGTAGACGATGCCGACGGGCAG
GCCACGGCCGGGAATGGGGC

Downstream 100 bases:

>100_bases
TCAATCATTGAGCCTCGGTGGGGACTGGGCTGACCACACCCAACTGGCTCAGCTGCAGCGCCGCCATGGTGGCTTCTATT
GCAGCCCTGTGCCTGGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MISSVGGLDESLWYLTLGEPMLPRASLENDIEADVCILGAGYSGLWTALFLKQKQPSLKVVVLEAAMAGEGASGRNGGWL
MGSFGGDLGYLAQLDGEARRRAKARITGTVARAANTFSELGIQCDFHHGGNLYQAARYPQQLKRLQAELAHFREAGFDEE
DYRLLSAADASHALNLPGTQAALYTPHCARVHPLKLARGLARAAERAGVVIYEHSPVQLAEKSRFTPSESGLKTQKNTVF
TPKGSVRAAVVVAALEGYQRLLGLDNRTSLPVFSVLCATEPLSEQQWATIGLENRETFADASRLITYGQRSADNRLVFGA
RGGYGFGGAVKTQFGFTPRTLGESPRGDIFDLRSQLLQAFFPALEGTQITHGWGGCLSLSRAFRPHALFDEAAGLAFVGG
YGGEGVGASMLFGETLAELIARPEGELAGMPWAYRGAVSEHLRRWESEPLPWLGYSASGLLYRFEERLLCRKPQPGYTPV
VSRLADALEILMS

Sequences:

>Translated_493_residues
MISSVGGLDESLWYLTLGEPMLPRASLENDIEADVCILGAGYSGLWTALFLKQKQPSLKVVVLEAAMAGEGASGRNGGWL
MGSFGGDLGYLAQLDGEARRRAKARITGTVARAANTFSELGIQCDFHHGGNLYQAARYPQQLKRLQAELAHFREAGFDEE
DYRLLSAADASHALNLPGTQAALYTPHCARVHPLKLARGLARAAERAGVVIYEHSPVQLAEKSRFTPSESGLKTQKNTVF
TPKGSVRAAVVVAALEGYQRLLGLDNRTSLPVFSVLCATEPLSEQQWATIGLENRETFADASRLITYGQRSADNRLVFGA
RGGYGFGGAVKTQFGFTPRTLGESPRGDIFDLRSQLLQAFFPALEGTQITHGWGGCLSLSRAFRPHALFDEAAGLAFVGG
YGGEGVGASMLFGETLAELIARPEGELAGMPWAYRGAVSEHLRRWESEPLPWLGYSASGLLYRFEERLLCRKPQPGYTPV
VSRLADALEILMS
>Mature_493_residues
MISSVGGLDESLWYLTLGEPMLPRASLENDIEADVCILGAGYSGLWTALFLKQKQPSLKVVVLEAAMAGEGASGRNGGWL
MGSFGGDLGYLAQLDGEARRRAKARITGTVARAANTFSELGIQCDFHHGGNLYQAARYPQQLKRLQAELAHFREAGFDEE
DYRLLSAADASHALNLPGTQAALYTPHCARVHPLKLARGLARAAERAGVVIYEHSPVQLAEKSRFTPSESGLKTQKNTVF
TPKGSVRAAVVVAALEGYQRLLGLDNRTSLPVFSVLCATEPLSEQQWATIGLENRETFADASRLITYGQRSADNRLVFGA
RGGYGFGGAVKTQFGFTPRTLGESPRGDIFDLRSQLLQAFFPALEGTQITHGWGGCLSLSRAFRPHALFDEAAGLAFVGG
YGGEGVGASMLFGETLAELIARPEGELAGMPWAYRGAVSEHLRRWESEPLPWLGYSASGLLYRFEERLLCRKPQPGYTPV
VSRLADALEILMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787559, Length=416, Percent_Identity=29.0865384615385, Blast_Score=118, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 53374; Mature: 53374

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSVGGLDESLWYLTLGEPMLPRASLENDIEADVCILGAGYSGLWTALFLKQKQPSLKV
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEE
VVLEAAMAGEGASGRNGGWLMGSFGGDLGYLAQLDGEARRRAKARITGTVARAANTFSEL
EEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
GIQCDFHHGGNLYQAARYPQQLKRLQAELAHFREAGFDEEDYRLLSAADASHALNLPGTQ
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
AALYTPHCARVHPLKLARGLARAAERAGVVIYEHSPVQLAEKSRFTPSESGLKTQKNTVF
EEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEE
TPKGSVRAAVVVAALEGYQRLLGLDNRTSLPVFSVLCATEPLSEQQWATIGLENRETFAD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHH
ASRLITYGQRSADNRLVFGARGGYGFGGAVKTQFGFTPRTLGESPRGDIFDLRSQLLQAF
HHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH
FPALEGTQITHGWGGCLSLSRAFRPHALFDEAAGLAFVGGYGGEGVGASMLFGETLAELI
HHHCCCCEEECCCHHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHH
ARPEGELAGMPWAYRGAVSEHLRRWESEPLPWLGYSASGLLYRFEERLLCRKPQPGYTPV
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHH
VSRLADALEILMS
HHHHHHHHHHHCC
>Mature Secondary Structure
MISSVGGLDESLWYLTLGEPMLPRASLENDIEADVCILGAGYSGLWTALFLKQKQPSLKV
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEE
VVLEAAMAGEGASGRNGGWLMGSFGGDLGYLAQLDGEARRRAKARITGTVARAANTFSEL
EEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
GIQCDFHHGGNLYQAARYPQQLKRLQAELAHFREAGFDEEDYRLLSAADASHALNLPGTQ
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
AALYTPHCARVHPLKLARGLARAAERAGVVIYEHSPVQLAEKSRFTPSESGLKTQKNTVF
EEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEE
TPKGSVRAAVVVAALEGYQRLLGLDNRTSLPVFSVLCATEPLSEQQWATIGLENRETFAD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHH
ASRLITYGQRSADNRLVFGARGGYGFGGAVKTQFGFTPRTLGESPRGDIFDLRSQLLQAF
HHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH
FPALEGTQITHGWGGCLSLSRAFRPHALFDEAAGLAFVGGYGGEGVGASMLFGETLAELI
HHHCCCCEEECCCHHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHH
ARPEGELAGMPWAYRGAVSEHLRRWESEPLPWLGYSASGLLYRFEERLLCRKPQPGYTPV
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHH
VSRLADALEILMS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]