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The map label for this gene is 119776000

Identifier: 119776000

GI number: 119776000

Start: 3406378

End: 3406824

Strand: Reverse

Name: 119776000

Synonym: Sama_2868

Alternate gene names: NA

Gene position: 3406824-3406378 (Counterclockwise)

Preceding gene: 119776001

Following gene: 119775998

Centisome position: 79.12

GC content: 43.4

Gene sequence:

>447_bases
ATGCGCGGTATGGTTTATTTCGCTTTTGTATTACTGGTATTGGCAGGTTGTCAGGCAACAGATAATTCGGCTGACAAACA
AGATTACCTGGATCTCACCAACCAGGAAAATTCAGATAAACCAATATCATATTGGACTGAAAATTATAGCCCCGTTCCAG
CGTTTCCCATCAGTGCAGCCAAGAAGTCGCTCTCTGGTTGTGTCACCTTATCGGTAAACATCAATACCCATGGCAAGATT
GATGGCTATAAAGTTATCCACTCATATCCCGGTGAGGTGTTTGTGCCTTCAGTGCTGGCAGCCCTTAAAAAATGGCGTTG
GGAACCCACAAAAGAAAACCTCGAACGAGTTCCTGCGATACAGATAGTGGGTCTGACTTTGGAAATTAAGGACGCAAAAA
ACAAAGCAGATTTTCGAAAGCAGTGCGAAGCATTTGTTCAATCTTGA

Upstream 100 bases:

>100_bases
TGCTGCGCCTCTAATGAAAGCGTAGGTTGCAACTTTGTTTTTATGTTGTTACTTTTCGGCCTGTTAAGATATTTCATTCA
TATGACAGGGACGTAACACT

Downstream 100 bases:

>100_bases
GTGGATTTTTCAATAGTTGATTGATTAGCCTCAAGTTATCAGGCCTTTGCTTCGCAGCAGCGCTACGATCACCCTTCCCA
CGGCAGGGCTTGATGGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRGMVYFAFVLLVLAGCQATDNSADKQDYLDLTNQENSDKPISYWTENYSPVPAFPISAAKKSLSGCVTLSVNINTHGKI
DGYKVIHSYPGEVFVPSVLAALKKWRWEPTKENLERVPAIQIVGLTLEIKDAKNKADFRKQCEAFVQS

Sequences:

>Translated_148_residues
MRGMVYFAFVLLVLAGCQATDNSADKQDYLDLTNQENSDKPISYWTENYSPVPAFPISAAKKSLSGCVTLSVNINTHGKI
DGYKVIHSYPGEVFVPSVLAALKKWRWEPTKENLERVPAIQIVGLTLEIKDAKNKADFRKQCEAFVQS
>Mature_148_residues
MRGMVYFAFVLLVLAGCQATDNSADKQDYLDLTNQENSDKPISYWTENYSPVPAFPISAAKKSLSGCVTLSVNINTHGKI
DGYKVIHSYPGEVFVPSVLAALKKWRWEPTKENLERVPAIQIVGLTLEIKDAKNKADFRKQCEAFVQS

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16529; Mature: 16529

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGMVYFAFVLLVLAGCQATDNSADKQDYLDLTNQENSDKPISYWTENYSPVPAFPISAA
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHH
KKSLSGCVTLSVNINTHGKIDGYKVIHSYPGEVFVPSVLAALKKWRWEPTKENLERVPAI
HHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCEE
QIVGLTLEIKDAKNKADFRKQCEAFVQS
EEEEEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGMVYFAFVLLVLAGCQATDNSADKQDYLDLTNQENSDKPISYWTENYSPVPAFPISAA
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHH
KKSLSGCVTLSVNINTHGKIDGYKVIHSYPGEVFVPSVLAALKKWRWEPTKENLERVPAI
HHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCEE
QIVGLTLEIKDAKNKADFRKQCEAFVQS
EEEEEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA