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The map label for this gene is ybjZ [C]

Identifier: 119775995

GI number: 119775995

Start: 3401483

End: 3402790

Strand: Reverse

Name: ybjZ [C]

Synonym: Sama_2863

Alternate gene names: 119775995

Gene position: 3402790-3401483 (Counterclockwise)

Preceding gene: 119775996

Following gene: 119775994

Centisome position: 79.02

GC content: 52.37

Gene sequence:

>1308_bases
ATGTTCAGTCACTATTTGGATCTCGCCTGGCGCTCGATTCGTAAAACACCCATGATGTCGCTGCTGATGGTGTTTGCCAT
CTCCATTGGTATTGGCATCACCATCATGACCCTCAACGTCCATCAGGTGATGAGTACCAATCCTGCCGGTGAACGCAGCG
ATAACTTGCTTGGCGTTCAACTCTGGAGTCAGGGACAGGATACCTGGCGGGACTACAGTGCCATTCTCACTTATCAGGAT
GTGATGCAACTCAGACATGGCACCTTGCCAGTGCGCCAGGCGGCCATGTTCCGTACCGGTAAGGCTGTCACCACGGACAA
TCCGGATATTGAGGCCGAAATGCAGTCTATTCGGGTGACCGACAGCGACTTTTTCGCCTTGTTTTCTGTGCCCTTTCTGT
ATGGCAGCGTGTGGGATAAGGAGGTGGATGAAGTGCCTGAGTATCTGGTGGTGATTGGCAAAGAGCTTAACGACAAGCTA
TTTGATGGTCGCAACAGTGTGGGTGAAACACTTTACCTGAACACCAAGCCCTATCGCATCGTTGGGGTCACGGATGATTG
GTCACCCAAGCCCAGATATTACGATCTCACCACCGGCAGCATGCAGGAAGCAGAGTTGCTGTTTGTGCCTTTCTCGTTGA
CACCGATAGAAGAGTTTGAGGTATGGGGTAATACCAACGGCTGGAAATTTGAAACCATGCTGACTTACCAGGACAGGATG
GCATCAGAAAAAGCCTGGTTGCAGTTCTGGGTAGAGGTGGATGGTGCCGAGCAGAGAAAGGCCTATCAGGAGTATCTGGA
TGCCCATGTCGACACCCAACAGCAACTGGGGCGTTTTACCGATAACACCAGAGATGCTTGGGCCCGTACCTTGGATGTGG
CCGAATTGCTGGATTTCCACCATGTGGTGCCCGAAGACAACAAGATCCTCATTGGTCTTAGCCTGTTGTTTTTGTTGGTG
TGTCTGGTCAATATCCTCGGCCTGATGCTGAGCAAATTTCTTAAACGGGCCCCAGAAATCGGGGTACGCCGCGCCATCGG
TGCCAGCAAGCGGCAAATCTTCGCCCAGCATCTGGTGGAGGTGGGTTGTATTGGAGCCATCGGCGGCGTCTTTGGCCTCT
TGTGGGCCTGGGTAGCTCTGCAATATCTGGCCAAGCGCTTTTTCCTCGAAGAAGCCATGTCCAATCTGGATGCCAGTATC
TGGATCATCGCCCCCTCTATCGCCATTGCGTCGGCCATGTTGGCTGGCATGTATCCTGCCTGGGTAATTTGCAAGACCAA
GCCCAGTATTTACCTCAAGAGCCAATAA

Upstream 100 bases:

>100_bases
TGAGCTGGCCCGCCGCGCTGAGCGCAACATCCAGATAGTCGATGGCCAGGTGTGTGATTTCCTCACCAGCCGCGCCGTGG
TTAACGGATAAGGGGGCGCC

Downstream 100 bases:

>100_bases
GGAGCGGCTATGACAGCTATCAAACCCATACTCAGTGCCATGCTGCGAAGCCGCAGTGGTCCCTTGTTGTTGCTGGCACA
GATAATACTGTCGGTTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Permease Protein; ABC-Type Transport System ATPase And Permease

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MFSHYLDLAWRSIRKTPMMSLLMVFAISIGIGITIMTLNVHQVMSTNPAGERSDNLLGVQLWSQGQDTWRDYSAILTYQD
VMQLRHGTLPVRQAAMFRTGKAVTTDNPDIEAEMQSIRVTDSDFFALFSVPFLYGSVWDKEVDEVPEYLVVIGKELNDKL
FDGRNSVGETLYLNTKPYRIVGVTDDWSPKPRYYDLTTGSMQEAELLFVPFSLTPIEEFEVWGNTNGWKFETMLTYQDRM
ASEKAWLQFWVEVDGAEQRKAYQEYLDAHVDTQQQLGRFTDNTRDAWARTLDVAELLDFHHVVPEDNKILIGLSLLFLLV
CLVNILGLMLSKFLKRAPEIGVRRAIGASKRQIFAQHLVEVGCIGAIGGVFGLLWAWVALQYLAKRFFLEEAMSNLDASI
WIIAPSIAIASAMLAGMYPAWVICKTKPSIYLKSQ

Sequences:

>Translated_435_residues
MFSHYLDLAWRSIRKTPMMSLLMVFAISIGIGITIMTLNVHQVMSTNPAGERSDNLLGVQLWSQGQDTWRDYSAILTYQD
VMQLRHGTLPVRQAAMFRTGKAVTTDNPDIEAEMQSIRVTDSDFFALFSVPFLYGSVWDKEVDEVPEYLVVIGKELNDKL
FDGRNSVGETLYLNTKPYRIVGVTDDWSPKPRYYDLTTGSMQEAELLFVPFSLTPIEEFEVWGNTNGWKFETMLTYQDRM
ASEKAWLQFWVEVDGAEQRKAYQEYLDAHVDTQQQLGRFTDNTRDAWARTLDVAELLDFHHVVPEDNKILIGLSLLFLLV
CLVNILGLMLSKFLKRAPEIGVRRAIGASKRQIFAQHLVEVGCIGAIGGVFGLLWAWVALQYLAKRFFLEEAMSNLDASI
WIIAPSIAIASAMLAGMYPAWVICKTKPSIYLKSQ
>Mature_435_residues
MFSHYLDLAWRSIRKTPMMSLLMVFAISIGIGITIMTLNVHQVMSTNPAGERSDNLLGVQLWSQGQDTWRDYSAILTYQD
VMQLRHGTLPVRQAAMFRTGKAVTTDNPDIEAEMQSIRVTDSDFFALFSVPFLYGSVWDKEVDEVPEYLVVIGKELNDKL
FDGRNSVGETLYLNTKPYRIVGVTDDWSPKPRYYDLTTGSMQEAELLFVPFSLTPIEEFEVWGNTNGWKFETMLTYQDRM
ASEKAWLQFWVEVDGAEQRKAYQEYLDAHVDTQQQLGRFTDNTRDAWARTLDVAELLDFHHVVPEDNKILIGLSLLFLLV
CLVNILGLMLSKFLKRAPEIGVRRAIGASKRQIFAQHLVEVGCIGAIGGVFGLLWAWVALQYLAKRFFLEEAMSNLDASI
WIIAPSIAIASAMLAGMYPAWVICKTKPSIYLKSQ

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49431; Mature: 49431

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSHYLDLAWRSIRKTPMMSLLMVFAISIGIGITIMTLNVHQVMSTNPAGERSDNLLGVQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCCCCEEEEE
LWSQGQDTWRDYSAILTYQDVMQLRHGTLPVRQAAMFRTGKAVTTDNPDIEAEMQSIRVT
EECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHEEEC
DSDFFALFSVPFLYGSVWDKEVDEVPEYLVVIGKELNDKLFDGRNSVGETLYLNTKPYRI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCEEE
VGVTDDWSPKPRYYDLTTGSMQEAELLFVPFSLTPIEEFEVWGNTNGWKFETMLTYQDRM
EEECCCCCCCCCEEECCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCEEEEEEEEEHHHH
ASEKAWLQFWVEVDGAEQRKAYQEYLDAHVDTQQQLGRFTDNTRDAWARTLDVAELLDFH
CCHHHHEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HVVPEDNKILIGLSLLFLLVCLVNILGLMLSKFLKRAPEIGVRRAIGASKRQIFAQHLVE
HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHH
VGCIGAIGGVFGLLWAWVALQYLAKRFFLEEAMSNLDASIWIIAPSIAIASAMLAGMYPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCE
WVICKTKPSIYLKSQ
EEEEECCCCEEEECC
>Mature Secondary Structure
MFSHYLDLAWRSIRKTPMMSLLMVFAISIGIGITIMTLNVHQVMSTNPAGERSDNLLGVQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCCCCEEEEE
LWSQGQDTWRDYSAILTYQDVMQLRHGTLPVRQAAMFRTGKAVTTDNPDIEAEMQSIRVT
EECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHEEEC
DSDFFALFSVPFLYGSVWDKEVDEVPEYLVVIGKELNDKLFDGRNSVGETLYLNTKPYRI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCEEE
VGVTDDWSPKPRYYDLTTGSMQEAELLFVPFSLTPIEEFEVWGNTNGWKFETMLTYQDRM
EEECCCCCCCCCEEECCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCEEEEEEEEEHHHH
ASEKAWLQFWVEVDGAEQRKAYQEYLDAHVDTQQQLGRFTDNTRDAWARTLDVAELLDFH
CCHHHHEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HVVPEDNKILIGLSLLFLLVCLVNILGLMLSKFLKRAPEIGVRRAIGASKRQIFAQHLVE
HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHH
VGCIGAIGGVFGLLWAWVALQYLAKRFFLEEAMSNLDASIWIIAPSIAIASAMLAGMYPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCE
WVICKTKPSIYLKSQ
EEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA