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The map label for this gene is macB1 [H]

Identifier: 119775994

GI number: 119775994

Start: 3400256

End: 3401473

Strand: Reverse

Name: macB1 [H]

Synonym: Sama_2862

Alternate gene names: 119775994

Gene position: 3401473-3400256 (Counterclockwise)

Preceding gene: 119775995

Following gene: 119775993

Centisome position: 78.99

GC content: 54.35

Gene sequence:

>1218_bases
ATGACAGCTATCAAACCCATACTCAGTGCCATGCTGCGAAGCCGCAGTGGTCCCTTGTTGTTGCTGGCACAGATAATACT
GTCGGTTGCCATAGTGGCCAACGCCGCATTTATCATCCAGCAGCGCGTGGATCTGATGGCCAGACCTTCAGGTATCACAG
AATCAGAGTCCTTTGAGTTTTCCGTGTTCAATTTTGGTGAGGAGATGGATCTTTTTGCCAGGGATGAGCGGGATTTGGAG
ATCCTGCGTAACCTGCCGGGGATAAAGTCCGCAGCCCCGATCAATATGGTGCCTCTGAGCGGTTCCGGGTGGAGCGATCG
TTTTGTTGATGGCCCGGATCCTAAAAATGCCAAATCGCTACCTCAGTTTGCGTTTTATCTGAGTGATGAAGAGTTGGTCA
ATGCCCTGGGGCTCAGGTTGGTGGAGGGACGCACCTTCCACAAGGGGCAGGTACTCAGTGGGTTTGAAGACAAAAGCATC
CAGCGTGAAGCTATCCTCAGCCAGCCTCTGGCCAAGGCGTTTTGGGGGGAAGAGTCCCCTATTGGTAAGGTCGTTTATCA
GGGGGATGACGAGCCCATTACCGTGGTGGGAGTGGTGGAGCGTCTCCATGGAGCCTGGGTCGATGACAGGAATCTGGAAA
ACAGTGTCATCATGAACATTGATTTCAACGGTCGTTCTCCCAACGCAGGTTATATGATCAGGTCCGAGGCGGCGGATATC
CCGCAGCTCAAGGAAACCATTAAAGCGGCCTTGCTCAAGGACGAGCCGCGCCGGGTTATCCGCGGCTTCAGCACCATAGC
CGAAAACCGGGAACAGAATTATGCCAGCCATGCCATGATGGTCTTTGTGCTTAGTTGTATGATAATCCTGCTGCTGGTGA
TCACGGCACTGGGCCTATCGGGTATGGTGATGTTCAATATCGAGCGCCGTACCCGCCAAATCGGTACCCGCAGGGCGTTG
GGTGCAACCCGCGGCAATATTCTGGGATGGTTTCTCACTGAAAACTATTTGCTGCTTGGCGTTGGGGCATTGGTTGGCTC
GCTGCTGGCCTTTGAACTCAGCCGTCAGTTGATGGACTTCTTCAGCCTGGATGCCCTTGCATGGCAATATCCCGCCGTGA
CCGTGGCGCTGCTGTTTGTGGTGACGACCATAGCGGTGATTATTCCCGCCAGACGCGCGGCGGCGATTTCCCCCTCTATT
GCCACCCGCAGTGTCTAA

Upstream 100 bases:

>100_bases
TATCGCCATTGCGTCGGCCATGTTGGCTGGCATGTATCCTGCCTGGGTAATTTGCAAGACCAAGCCCAGTATTTACCTCA
AGAGCCAATAAGGAGCGGCT

Downstream 100 bases:

>100_bases
TGGTGTAACCCATCGAGGGCTCGCAAATGGCGGGCCCTTACGTTATCGTGTAGTGGCTGAATTAACCAAGATGAATCAAA
TGGATAAGATATTAATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTAIKPILSAMLRSRSGPLLLLAQIILSVAIVANAAFIIQQRVDLMARPSGITESESFEFSVFNFGEEMDLFARDERDLE
ILRNLPGIKSAAPINMVPLSGSGWSDRFVDGPDPKNAKSLPQFAFYLSDEELVNALGLRLVEGRTFHKGQVLSGFEDKSI
QREAILSQPLAKAFWGEESPIGKVVYQGDDEPITVVGVVERLHGAWVDDRNLENSVIMNIDFNGRSPNAGYMIRSEAADI
PQLKETIKAALLKDEPRRVIRGFSTIAENREQNYASHAMMVFVLSCMIILLLVITALGLSGMVMFNIERRTRQIGTRRAL
GATRGNILGWFLTENYLLLGVGALVGSLLAFELSRQLMDFFSLDALAWQYPAVTVALLFVVTTIAVIIPARRAAAISPSI
ATRSV

Sequences:

>Translated_405_residues
MTAIKPILSAMLRSRSGPLLLLAQIILSVAIVANAAFIIQQRVDLMARPSGITESESFEFSVFNFGEEMDLFARDERDLE
ILRNLPGIKSAAPINMVPLSGSGWSDRFVDGPDPKNAKSLPQFAFYLSDEELVNALGLRLVEGRTFHKGQVLSGFEDKSI
QREAILSQPLAKAFWGEESPIGKVVYQGDDEPITVVGVVERLHGAWVDDRNLENSVIMNIDFNGRSPNAGYMIRSEAADI
PQLKETIKAALLKDEPRRVIRGFSTIAENREQNYASHAMMVFVLSCMIILLLVITALGLSGMVMFNIERRTRQIGTRRAL
GATRGNILGWFLTENYLLLGVGALVGSLLAFELSRQLMDFFSLDALAWQYPAVTVALLFVVTTIAVIIPARRAAAISPSI
ATRSV
>Mature_404_residues
TAIKPILSAMLRSRSGPLLLLAQIILSVAIVANAAFIIQQRVDLMARPSGITESESFEFSVFNFGEEMDLFARDERDLEI
LRNLPGIKSAAPINMVPLSGSGWSDRFVDGPDPKNAKSLPQFAFYLSDEELVNALGLRLVEGRTFHKGQVLSGFEDKSIQ
REAILSQPLAKAFWGEESPIGKVVYQGDDEPITVVGVVERLHGAWVDDRNLENSVIMNIDFNGRSPNAGYMIRSEAADIP
QLKETIKAALLKDEPRRVIRGFSTIAENREQNYASHAMMVFVLSCMIILLLVITALGLSGMVMFNIERRTRQIGTRRALG
ATRGNILGWFLTENYLLLGVGALVGSLLAFELSRQLMDFFSLDALAWQYPAVTVALLFVVTTIAVIIPARRAAAISPSIA
TRSV

Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017911
- InterPro:   IPR003593
- InterPro:   IPR003838 [H]

Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 44585; Mature: 44454

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIKPILSAMLRSRSGPLLLLAQIILSVAIVANAAFIIQQRVDLMARPSGITESESFEF
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
SVFNFGEEMDLFARDERDLEILRNLPGIKSAAPINMVPLSGSGWSDRFVDGPDPKNAKSL
EEECCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
PQFAFYLSDEELVNALGLRLVEGRTFHKGQVLSGFEDKSIQREAILSQPLAKAFWGEESP
CHHHEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
IGKVVYQGDDEPITVVGVVERLHGAWVDDRNLENSVIMNIDFNGRSPNAGYMIRSEAADI
CCCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCC
PQLKETIKAALLKDEPRRVIRGFSTIAENREQNYASHAMMVFVLSCMIILLLVITALGLS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GMVMFNIERRTRQIGTRRALGATRGNILGWFLTENYLLLGVGALVGSLLAFELSRQLMDF
CEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCHHEEEHHHHHHHHHHHHHHHHHHHH
FSLDALAWQYPAVTVALLFVVTTIAVIIPARRAAAISPSIATRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHCCCC
>Mature Secondary Structure 
TAIKPILSAMLRSRSGPLLLLAQIILSVAIVANAAFIIQQRVDLMARPSGITESESFEF
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
SVFNFGEEMDLFARDERDLEILRNLPGIKSAAPINMVPLSGSGWSDRFVDGPDPKNAKSL
EEECCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
PQFAFYLSDEELVNALGLRLVEGRTFHKGQVLSGFEDKSIQREAILSQPLAKAFWGEESP
CHHHEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
IGKVVYQGDDEPITVVGVVERLHGAWVDDRNLENSVIMNIDFNGRSPNAGYMIRSEAADI
CCCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCC
PQLKETIKAALLKDEPRRVIRGFSTIAENREQNYASHAMMVFVLSCMIILLLVITALGLS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GMVMFNIERRTRQIGTRRALGATRGNILGWFLTENYLLLGVGALVGSLLAFELSRQLMDF
CEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCHHEEEHHHHHHHHHHHHHHHHHHHH
FSLDALAWQYPAVTVALLFVVTTIAVIIPARRAAAISPSIATRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA