| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775893
Identifier: 119775893
GI number: 119775893
Start: 3302497
End: 3302814
Strand: Reverse
Name: 119775893
Synonym: Sama_2761
Alternate gene names: NA
Gene position: 3302814-3302497 (Counterclockwise)
Preceding gene: 119775894
Following gene: 119775891
Centisome position: 76.7
GC content: 53.46
Gene sequence:
>318_bases ATGCAATATATCCAACAGCTGTTAATGCCTTACCAACAACACGCGCTCAGCGCCTGGGACAGATTACGCCTGGGTTACAG TCTCTGTGTACATGAGGGTGTCGAGGTTAAGGCCTTTCGAGGTGGTCAGCCTGAGGCTTATTGGCTGCAAGTGCCCGAAG GTTACGTGCATTGCGGCACTATTCATTCGGTGGGGACGGCTTGGCAGTGGGACATCATGCCGGATGGCAATCTGGAGCTG CTAAAGTTGGAAGCCGTGCCTGAAAGCCAGTTGGGATTTCTATTGGTGCAGGCTGCGCACTTCGACCACTGCTATTAG
Upstream 100 bases:
>100_bases GGCTGGTTGTATGCCAAGGCATTGCCTCAAGCCCGGGCAATGGAATATGCGCTTAATCATGGCAAAATAACCCCTAACGA TTTGGACACCATCTGACACT
Downstream 100 bases:
>100_bases TCTACCTCTGCGGCAAACTGACGATTGCTACAGGCAAAGGCCTGTCGGTGTGAGGTACCTTGAGGTGAGCCAGAGACAAA AAAACCGCCTTTCGGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MQYIQQLLMPYQQHALSAWDRLRLGYSLCVHEGVEVKAFRGGQPEAYWLQVPEGYVHCGTIHSVGTAWQWDIMPDGNLEL LKLEAVPESQLGFLLVQAAHFDHCY
Sequences:
>Translated_105_residues MQYIQQLLMPYQQHALSAWDRLRLGYSLCVHEGVEVKAFRGGQPEAYWLQVPEGYVHCGTIHSVGTAWQWDIMPDGNLEL LKLEAVPESQLGFLLVQAAHFDHCY >Mature_105_residues MQYIQQLLMPYQQHALSAWDRLRLGYSLCVHEGVEVKAFRGGQPEAYWLQVPEGYVHCGTIHSVGTAWQWDIMPDGNLEL LKLEAVPESQLGFLLVQAAHFDHCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12029; Mature: 12029
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYIQQLLMPYQQHALSAWDRLRLGYSLCVHEGVEVKAFRGGQPEAYWLQVPEGYVHCGT CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCEEEEECCCCEEEECC IHSVGTAWQWDIMPDGNLELLKLEAVPESQLGFLLVQAAHFDHCY CCCCCCEEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MQYIQQLLMPYQQHALSAWDRLRLGYSLCVHEGVEVKAFRGGQPEAYWLQVPEGYVHCGT CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCEEEEECCCCEEEECC IHSVGTAWQWDIMPDGNLELLKLEAVPESQLGFLLVQAAHFDHCY CCCCCCEEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA