The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yedI [H]

Identifier: 119775867

GI number: 119775867

Start: 3268191

End: 3269120

Strand: Reverse

Name: yedI [H]

Synonym: Sama_2735

Alternate gene names: 119775867

Gene position: 3269120-3268191 (Counterclockwise)

Preceding gene: 119775869

Following gene: 119775866

Centisome position: 75.92

GC content: 56.02

Gene sequence:

>930_bases
ATGGCTGGAGCCAGTTTGCTCACCCTACTGGATGATATTGCGACCATTCTGGATGATGTGTCTGTGATGAGTAAGGTTGC
TGCCAAGAAAACCGCCGGGGTGCTGGGGGACGATTTGGCCCTCAACGCCCAACAGGTCACCGGGGTTAATGCCGACCGGG
AGTTACCCGTGGTGTGGGCCGTGGCCAAGGGCTCATTTCTCAATAAGTTAATCCTGGTTCCCCTGGCGCTGCTCATCAGC
GCCTTTGTCCCTTGGCTGGTGACGCCTCTGTTGATGTTCGGTGGCCTGTTTTTGTGTTTCGAAGGCTTTGAAAAGCTGTG
GCATGCCAGAGCCAAGCATGTGCCGGTGGAGGGTGAAGATGCCCACGAGGCATTGGTGCCAAAGGGCATGGACCCCCAAG
AATATGAAAAGCAAAAGGTGAAAGGTGCGATACGCACCGATTTTGTGCTCTCGGCAGAGATCATTGCCATTACCCTGGGC
GTGGTAGCCGAGCAACCCTTTATGACCCAGGTCGCGACCCTGTCCATCATTGCGGTGCTGATGACCATAGGCGTTTATGG
CTTGGTGGCGGGCATAGTCAAACTCGATGATTTGGGACTCTGGCTGTCGCGTAAATCCGCTGCATTGGCCAAGATGGTCG
GTAACCTGCTGCTGGCTGCGGCGCCCAAACTGATGAAACTCTTATCTGTGGTGGGTACGGCCGCCATGTTTATGGTGGGG
GGAGGCATCCTTACCCACGGTATCCATGTGCTTCACGACGGTATCAACGCTGCGGCGGCGCGGGTTGGGGCGATTGAGGC
CATAGGTCCTGTGCTCGAATTCTTTACCCCCAGTGCGCTGAATCTGCTGTTTGGCATAGTCGCGGGGGCTGTGGCCGTGC
TCGTGATGACCTTGATTGCAAAGTTTAAACCCGCAAAGGCGGCGAATTGA

Upstream 100 bases:

>100_bases
TGCCGTTACTCTGACACTTTTGCATCCCGGGGGTGCGTTTTGCCGAAGGGATGGATTAGGATAACCGCAACCGATTTCGG
AGTTTTCACAAGGAGTTGTT

Downstream 100 bases:

>100_bases
TTATTCACCGTTTTTTGTCAAAGTCGCATTGATGACACAGTACTTTGCCGGATGTAAATCGGGCTGTATACACTGAGCCC
CGAGTCATCGCCGGGTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MAGASLLTLLDDIATILDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWAVAKGSFLNKLILVPLALLIS
AFVPWLVTPLLMFGGLFLCFEGFEKLWHARAKHVPVEGEDAHEALVPKGMDPQEYEKQKVKGAIRTDFVLSAEIIAITLG
VVAEQPFMTQVATLSIIAVLMTIGVYGLVAGIVKLDDLGLWLSRKSAALAKMVGNLLLAAAPKLMKLLSVVGTAAMFMVG
GGILTHGIHVLHDGINAAAARVGAIEAIGPVLEFFTPSALNLLFGIVAGAVAVLVMTLIAKFKPAKAAN

Sequences:

>Translated_309_residues
MAGASLLTLLDDIATILDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWAVAKGSFLNKLILVPLALLIS
AFVPWLVTPLLMFGGLFLCFEGFEKLWHARAKHVPVEGEDAHEALVPKGMDPQEYEKQKVKGAIRTDFVLSAEIIAITLG
VVAEQPFMTQVATLSIIAVLMTIGVYGLVAGIVKLDDLGLWLSRKSAALAKMVGNLLLAAAPKLMKLLSVVGTAAMFMVG
GGILTHGIHVLHDGINAAAARVGAIEAIGPVLEFFTPSALNLLFGIVAGAVAVLVMTLIAKFKPAKAAN
>Mature_308_residues
AGASLLTLLDDIATILDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWAVAKGSFLNKLILVPLALLISA
FVPWLVTPLLMFGGLFLCFEGFEKLWHARAKHVPVEGEDAHEALVPKGMDPQEYEKQKVKGAIRTDFVLSAEIIAITLGV
VAEQPFMTQVATLSIIAVLMTIGVYGLVAGIVKLDDLGLWLSRKSAALAKMVGNLLLAAAPKLMKLLSVVGTAAMFMVGG
GILTHGIHVLHDGINAAAARVGAIEAIGPVLEFFTPSALNLLFGIVAGAVAVLVMTLIAKFKPAKAAN

Specific function: Unknown

COG id: COG2354

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788268, Length=307, Percent_Identity=58.957654723127, Blast_Score=343, Evalue=1e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008526 [H]

Pfam domain/function: PF05661 DUF808 [H]

EC number: NA

Molecular weight: Translated: 32375; Mature: 32244

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGASLLTLLDDIATILDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCEEEE
VAKGSFLNKLILVPLALLISAFVPWLVTPLLMFGGLFLCFEGFEKLWHARAKHVPVEGED
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AHEALVPKGMDPQEYEKQKVKGAIRTDFVLSAEIIAITLGVVAEQPFMTQVATLSIIAVL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MTIGVYGLVAGIVKLDDLGLWLSRKSAALAKMVGNLLLAAAPKLMKLLSVVGTAAMFMVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGILTHGIHVLHDGINAAAARVGAIEAIGPVLEFFTPSALNLLFGIVAGAVAVLVMTLIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KFKPAKAAN
HCCCCCCCC
>Mature Secondary Structure 
AGASLLTLLDDIATILDDVSVMSKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCEEEE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HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]