The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775818

Identifier: 119775818

GI number: 119775818

Start: 3215152

End: 3215679

Strand: Reverse

Name: 119775818

Synonym: Sama_2686

Alternate gene names: NA

Gene position: 3215679-3215152 (Counterclockwise)

Preceding gene: 119775820

Following gene: 119775812

Centisome position: 74.68

GC content: 59.66

Gene sequence:

>528_bases
ATGACACAAAAAATTCTCTCGCTGGCATTGGGTGCCCTGTTGATGTCTGGCTGCGGCTGGTTTGGGGGGGATGAAAAGGC
GGCGATGGAGCAGGCCTGGCTTGCGCGTAATGCCGACATTCAGCAAGCGATTGAGCAAATTCGTGCCGAGGGGCTGGATG
CTGTGGTGGTAAGCGCCGAAGCCGGGTCGGTGGCGGCCTGTGTGGCCAATAAACTTGCCGAAGACCCGCTGGGCGAGTTG
GTAAACGTGGAAGGGGCGCTGGTGGAGTCGGCCAAGGTGGCTGAGTTGCTCGCCAATGTGCAGTCGATGATGGAACAGGA
ATTTGATCTGCAAAATGCAGCTGCCCTCCTGCAGCAGGGCTCCGATGTGGCAGCCTATGCCAAGGCGCTGATTGAGCAGG
AAGGGCTGGAAGGCGCTTCCCAAACATTGGCGCGCATGGCGAGCCAGGCTCAGGCTTTTGCCGGACAGGATCTGGGGCAA
CACTTCAAGACCCTGATTGGCAGCTGCGAGACGACTGCCGGGACCTGA

Upstream 100 bases:

>100_bases
GTTCATCCCCGTTTAAGGCGATTCTGGAACACTGTGGCAACACGGGGCAGCGCAGTTATTCATGCCTTGTTTATGGATAG
TTGATTTAAAGGAAAAGGCA

Downstream 100 bases:

>100_bases
CAGCTTCAAGCAGGAGACTGCAAGACGCTGTCTGACGGCTTTGGATTAACTCACGCTGGCGGGAATTCTGTCCGCCAGTG
CTCGGGTATTCAAACTGACT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTQKILSLALGALLMSGCGWFGGDEKAAMEQAWLARNADIQQAIEQIRAEGLDAVVVSAEAGSVAACVANKLAEDPLGEL
VNVEGALVESAKVAELLANVQSMMEQEFDLQNAAALLQQGSDVAAYAKALIEQEGLEGASQTLARMASQAQAFAGQDLGQ
HFKTLIGSCETTAGT

Sequences:

>Translated_175_residues
MTQKILSLALGALLMSGCGWFGGDEKAAMEQAWLARNADIQQAIEQIRAEGLDAVVVSAEAGSVAACVANKLAEDPLGEL
VNVEGALVESAKVAELLANVQSMMEQEFDLQNAAALLQQGSDVAAYAKALIEQEGLEGASQTLARMASQAQAFAGQDLGQ
HFKTLIGSCETTAGT
>Mature_174_residues
TQKILSLALGALLMSGCGWFGGDEKAAMEQAWLARNADIQQAIEQIRAEGLDAVVVSAEAGSVAACVANKLAEDPLGELV
NVEGALVESAKVAELLANVQSMMEQEFDLQNAAALLQQGSDVAAYAKALIEQEGLEGASQTLARMASQAQAFAGQDLGQH
FKTLIGSCETTAGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18156; Mature: 18024

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKILSLALGALLMSGCGWFGGDEKAAMEQAWLARNADIQQAIEQIRAEGLDAVVVSAE
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECC
AGSVAACVANKLAEDPLGELVNVEGALVESAKVAELLANVQSMMEQEFDLQNAAALLQQG
CCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDVAAYAKALIEQEGLEGASQTLARMASQAQAFAGQDLGQHFKTLIGSCETTAGT
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQKILSLALGALLMSGCGWFGGDEKAAMEQAWLARNADIQQAIEQIRAEGLDAVVVSAE
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECC
AGSVAACVANKLAEDPLGELVNVEGALVESAKVAELLANVQSMMEQEFDLQNAAALLQQG
CCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDVAAYAKALIEQEGLEGASQTLARMASQAQAFAGQDLGQHFKTLIGSCETTAGT
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA