Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is 119775690
Identifier: 119775690
GI number: 119775690
Start: 3065363
End: 3065725
Strand: Direct
Name: 119775690
Synonym: Sama_2558
Alternate gene names: NA
Gene position: 3065363-3065725 (Clockwise)
Preceding gene: 119775688
Following gene: 119775691
Centisome position: 71.19
GC content: 53.99
Gene sequence:
>363_bases GTGAAGAATCGGCAGTTTTTGTTCAAAATCATTTTGGTGATTGCCCTGTGTATCACCAGTTATCTGGTCTTTTCCAAACC CAGCTATCCCCAGTCCATTCCCCATTTGGACAAAGTGGGGCATTTCGGCACTTTCTTTGGTTTGGCTTGGCTGACCCAAC TGGCATTCAGACCTCGCTGGTACATCATGTTGCTGGCACTGGCCGCCTACGCCGGTTTGATTGAAATCATTCAGTCTCGC CTGCCCTACCGCTCCGCCTCCTGGGGCGATATCGCAGCCGACCTCGCGGGCGTTGCCGCCTTCTTCCTCACTGCATGGCT GTATAGTAAATACCGCCGCGCATCCAGGCTTCAGGGCGCATGA
Upstream 100 bases:
>100_bases AAGTCCGCCGTTGAAGACACAGAGTTTTACAGGCCGATGAGTGACTTTGGCTGGACATTTCCCTATCATGGGCGCCTAAG TCTACCAGCGAAAGTTCCGT
Downstream 100 bases:
>100_bases GCCGAATTGGCATTCTGGGTGCGGGCGCCGTGGGCCAGTTAATTGCCCATCAGCTGGCGTCGGCGGGCACCTTGCCCTTT CTGCTGGACCGGCAGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: VanZ Like Protein
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKNRQFLFKIILVIALCITSYLVFSKPSYPQSIPHLDKVGHFGTFFGLAWLTQLAFRPRWYIMLLALAAYAGLIEIIQSR LPYRSASWGDIAADLAGVAAFFLTAWLYSKYRRASRLQGA
Sequences:
>Translated_120_residues MKNRQFLFKIILVIALCITSYLVFSKPSYPQSIPHLDKVGHFGTFFGLAWLTQLAFRPRWYIMLLALAAYAGLIEIIQSR LPYRSASWGDIAADLAGVAAFFLTAWLYSKYRRASRLQGA >Mature_120_residues MKNRQFLFKIILVIALCITSYLVFSKPSYPQSIPHLDKVGHFGTFFGLAWLTQLAFRPRWYIMLLALAAYAGLIEIIQSR LPYRSASWGDIAADLAGVAAFFLTAWLYSKYRRASRLQGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13651; Mature: 13651
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRQFLFKIILVIALCITSYLVFSKPSYPQSIPHLDKVGHFGTFFGLAWLTQLAFRPRW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH YIMLLALAAYAGLIEIIQSRLPYRSASWGDIAADLAGVAAFFLTAWLYSKYRRASRLQGA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNRQFLFKIILVIALCITSYLVFSKPSYPQSIPHLDKVGHFGTFFGLAWLTQLAFRPRW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH YIMLLALAAYAGLIEIIQSRLPYRSASWGDIAADLAGVAAFFLTAWLYSKYRRASRLQGA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA