| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is arsB [H]
Identifier: 119774615
GI number: 119774615
Start: 1789277
End: 1790353
Strand: Direct
Name: arsB [H]
Synonym: Sama_1478
Alternate gene names: 119774615
Gene position: 1789277-1790353 (Clockwise)
Preceding gene: 119774614
Following gene: 119774623
Centisome position: 41.55
GC content: 51.44
Gene sequence:
>1077_bases ATGACGACCAATCGTTGTATTGATGTGCCTGTCAGCCAAAAGATGAGCTTTCTTGATCGCAATCTCACCCTGTGGATTTT TGTTGCCATGGCGCTAGGGGTAGCACTCGGTTACCTGTTTCCCGGTATCGCCCAGCTCAATGAGTCGATGTCAGTGGGCT CTACCAACGTGCCGCTGGCGATTGGCCTCATCCTGATGATGTATCCACCCTTGGCCAAGGTGAACTACGCCACCATGGGC ACCATGGCAAGGGATCGCCGTGCCATTACCCTGTCGCTGCTGATGAACTGGTTGATTGGTCCGATACTGATGTTTGCCAT CGCCCTGCTGTTTTTACGGGACTACCCGGGGTATATGGTCGGCCTGACCCTGATTGGCCTTGCCCGTTGCATCGCCATGG TACTGGTATGGAATGATCTTGCCGGCGGCAGCAAGGAGTATGGCGCAGGACTGGTAGCCTTAAACAGCGCGTTTCAAATT CTGACCTATAGCTTTATGGCGTGGCTGTTTATTACTGTCCTGCCGCCTCTGTTTGGACTGCAGGGGGTTGCTGTGGATAT CACTATGCTGGATATTGCCAAAAGCGTGCTCATTTATCTCGGTATTCCCTTTGTCGCGGGTTTCTTAAGCCGTAAATACC TGATTAGGGCCAAGGGCGAGCAGTGGTACACAGAACGCTTTATCCCGGCTATCTCGCCCATTACGCTGATAGCGCTATTG GCAACCATAGTGCTGATGTTCAGCCTCAAGGGGGAAATGATAGTGCAGCTGCCAATGGATGTGCTGCGGGTCGCCCTTCC TTTGGTGCTTTACTTTGTGCTGATGTTTTTCTCAAGCTTTTATATTGGTAAAAAGCTTGGGCTTCCCTACGATAAAAACG CCTCTATCGCGTTTACTGCCACGGGAAATAACTTTGAGTTGGCTATAGCCGTTTCAATTGCGGTATTTGGCTTGAATTCA GATCAGGCGTTTGCCGGTGTGATAGGTCCGCTGGTGGAGGTGCCTGTGCTTATCCTGCTGGTTAACGTGGCACTTCGCTT CAAGCAAGGTTACACCAGGTCCTTAAGTGCGTCCTGA
Upstream 100 bases:
>100_bases TTGGCCATATAAAGGTAAGCATTTTGGTGGTGGCCCCGATTTCAACTGGTTTACCATGTTATTGATATTATGAATTATCT GAATTCTATGGAGTCTTTCG
Downstream 100 bases:
>100_bases CGTCTATAGGGCTCAAGCCCAGGTTCTCAACGTCTGAGATGCAGTGACCAATATAATGTAATGGCGGAGTACCCGGGATT TGGGTACTCCGCCAGATCGT
Product: arsenite efflux pump ACR3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTTNRCIDVPVSQKMSFLDRNLTLWIFVAMALGVALGYLFPGIAQLNESMSVGSTNVPLAIGLILMMYPPLAKVNYATMG TMARDRRAITLSLLMNWLIGPILMFAIALLFLRDYPGYMVGLTLIGLARCIAMVLVWNDLAGGSKEYGAGLVALNSAFQI LTYSFMAWLFITVLPPLFGLQGVAVDITMLDIAKSVLIYLGIPFVAGFLSRKYLIRAKGEQWYTERFIPAISPITLIALL ATIVLMFSLKGEMIVQLPMDVLRVALPLVLYFVLMFFSSFYIGKKLGLPYDKNASIAFTATGNNFELAIAVSIAVFGLNS DQAFAGVIGPLVEVPVLILLVNVALRFKQGYTRSLSAS
Sequences:
>Translated_358_residues MTTNRCIDVPVSQKMSFLDRNLTLWIFVAMALGVALGYLFPGIAQLNESMSVGSTNVPLAIGLILMMYPPLAKVNYATMG TMARDRRAITLSLLMNWLIGPILMFAIALLFLRDYPGYMVGLTLIGLARCIAMVLVWNDLAGGSKEYGAGLVALNSAFQI LTYSFMAWLFITVLPPLFGLQGVAVDITMLDIAKSVLIYLGIPFVAGFLSRKYLIRAKGEQWYTERFIPAISPITLIALL ATIVLMFSLKGEMIVQLPMDVLRVALPLVLYFVLMFFSSFYIGKKLGLPYDKNASIAFTATGNNFELAIAVSIAVFGLNS DQAFAGVIGPLVEVPVLILLVNVALRFKQGYTRSLSAS >Mature_357_residues TTNRCIDVPVSQKMSFLDRNLTLWIFVAMALGVALGYLFPGIAQLNESMSVGSTNVPLAIGLILMMYPPLAKVNYATMGT MARDRRAITLSLLMNWLIGPILMFAIALLFLRDYPGYMVGLTLIGLARCIAMVLVWNDLAGGSKEYGAGLVALNSAFQIL TYSFMAWLFITVLPPLFGLQGVAVDITMLDIAKSVLIYLGIPFVAGFLSRKYLIRAKGEQWYTERFIPAISPITLIALLA TIVLMFSLKGEMIVQLPMDVLRVALPLVLYFVLMFFSSFYIGKKLGLPYDKNASIAFTATGNNFELAIAVSIAVFGLNSD QAFAGVIGPLVEVPVLILLVNVALRFKQGYTRSLSAS
Specific function: Seems to confer resistance to arsenite by allowing cells to extrude this compound. Could be part of an arsenite extrusion pump [H]
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=327, Percent_Identity=32.1100917431193, Blast_Score=155, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 39160; Mature: 39029
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNRCIDVPVSQKMSFLDRNLTLWIFVAMALGVALGYLFPGIAQLNESMSVGSTNVPLA CCCCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHH IGLILMMYPPLAKVNYATMGTMARDRRAITLSLLMNWLIGPILMFAIALLFLRDYPGYMV HHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH GLTLIGLARCIAMVLVWNDLAGGSKEYGAGLVALNSAFQILTYSFMAWLFITVLPPLFGL HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGVAVDITMLDIAKSVLIYLGIPFVAGFLSRKYLIRAKGEQWYTERFIPAISPITLIALL CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCHHHHHHHH ATIVLMFSLKGEMIVQLPMDVLRVALPLVLYFVLMFFSSFYIGKKLGLPYDKNASIAFTA HHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE TGNNFELAIAVSIAVFGLNSDQAFAGVIGPLVEVPVLILLVNVALRFKQGYTRSLSAS ECCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTNRCIDVPVSQKMSFLDRNLTLWIFVAMALGVALGYLFPGIAQLNESMSVGSTNVPLA CCCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHH IGLILMMYPPLAKVNYATMGTMARDRRAITLSLLMNWLIGPILMFAIALLFLRDYPGYMV HHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH GLTLIGLARCIAMVLVWNDLAGGSKEYGAGLVALNSAFQILTYSFMAWLFITVLPPLFGL HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGVAVDITMLDIAKSVLIYLGIPFVAGFLSRKYLIRAKGEQWYTERFIPAISPITLIALL CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCHHHHHHHH ATIVLMFSLKGEMIVQLPMDVLRVALPLVLYFVLMFFSSFYIGKKLGLPYDKNASIAFTA HHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE TGNNFELAIAVSIAVFGLNSDQAFAGVIGPLVEVPVLILLVNVALRFKQGYTRSLSAS ECCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704261; 8969508; 9384377; 7489895; 9537360 [H]