| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is mhqP [H]
Identifier: 119774526
GI number: 119774526
Start: 1680855
End: 1681295
Strand: Direct
Name: mhqP [H]
Synonym: Sama_1389
Alternate gene names: 119774526
Gene position: 1680855-1681295 (Clockwise)
Preceding gene: 119774524
Following gene: 119774527
Centisome position: 39.03
GC content: 57.37
Gene sequence:
>441_bases ATGAACAGCACAATCAAAAAACTTGTACAAACCCAGGACAGCATCGCCCCATTGGCCCTGCGCATACCCGCCGGCATTAT CTTTATGGCCCACGGTGCCCAGAAGCTCTTTGGCTGGTTTGGCGGTTACGGTATCGAAGGTACTGGACAGTGGATGGCCT CCATAGGACTGGAGCCAGGCTGGCTGATGGCAGCCATGGCGGGCGGCGCCGAATTTTTCGGTGGTCTGGCGATTCTGCTG GGGCTGCTGACACGTCCCGCAGCGCTGGTGCTGGCCGTAACCATGGTGGTTGCCATCGTCACAGTGCATCTGGGGAATGG CCTGTTTATGGCCAATAATGGTTACGAATTTGGTCTGGCGCTGCTGGCCATGAGTGTCTCTCTGGTGCTCTCCGGCTCGG GTCGATTCGGTATCGACAGGCTGCTGCAACAAAAAGGCTGA
Upstream 100 bases:
>100_bases CGATTTTTTCTGTGAGTCTATCGCCATAAACTAAAATTCAATCAAGGCTGAGTGGAAGCTTGAGACCAATAACAGTGATT TGAAACATGAGGCACAGACT
Downstream 100 bases:
>100_bases GGAGGGGACATGATAACGCTTCGCCCGGCCAATGAGCGGGGTCAAGCCAGCCACGGCTGGCTTGACAGTTTTCACAGCTT TTCCTTCGCCGAATACTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MNSTIKKLVQTQDSIAPLALRIPAGIIFMAHGAQKLFGWFGGYGIEGTGQWMASIGLEPGWLMAAMAGGAEFFGGLAILL GLLTRPAALVLAVTMVVAIVTVHLGNGLFMANNGYEFGLALLAMSVSLVLSGSGRFGIDRLLQQKG
Sequences:
>Translated_146_residues MNSTIKKLVQTQDSIAPLALRIPAGIIFMAHGAQKLFGWFGGYGIEGTGQWMASIGLEPGWLMAAMAGGAEFFGGLAILL GLLTRPAALVLAVTMVVAIVTVHLGNGLFMANNGYEFGLALLAMSVSLVLSGSGRFGIDRLLQQKG >Mature_146_residues MNSTIKKLVQTQDSIAPLALRIPAGIIFMAHGAQKLFGWFGGYGIEGTGQWMASIGLEPGWLMAAMAGGAEFFGGLAILL GLLTRPAALVLAVTMVVAIVTVHLGNGLFMANNGYEFGLALLAMSVSLVLSGSGRFGIDRLLQQKG
Specific function: Putative oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 15223; Mature: 15223
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTIKKLVQTQDSIAPLALRIPAGIIFMAHGAQKLFGWFGGYGIEGTGQWMASIGLEPG CCHHHHHHHHHCCCCCCEEEECCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHCCCCCH WLMAAMAGGAEFFGGLAILLGLLTRPAALVLAVTMVVAIVTVHLGNGLFMANNGYEFGLA HHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHH LLAMSVSLVLSGSGRFGIDRLLQQKG HHHHHHHHHHCCCCCCCHHHHHHCCC >Mature Secondary Structure MNSTIKKLVQTQDSIAPLALRIPAGIIFMAHGAQKLFGWFGGYGIEGTGQWMASIGLEPG CCHHHHHHHHHCCCCCCEEEECCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHCCCCCH WLMAAMAGGAEFFGGLAILLGLLTRPAALVLAVTMVVAIVTVHLGNGLFMANNGYEFGLA HHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHH LLAMSVSLVLSGSGRFGIDRLLQQKG HHHHHHHHHHCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9341680; 9384377 [H]