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The map label for this gene is ybbN [H]

Identifier: 119774451

GI number: 119774451

Start: 1598135

End: 1599010

Strand: Direct

Name: ybbN [H]

Synonym: Sama_1314

Alternate gene names: 119774451

Gene position: 1598135-1599010 (Clockwise)

Preceding gene: 119774450

Following gene: 119774452

Centisome position: 37.11

GC content: 57.08

Gene sequence:

>876_bases
ATGACTCAAGGGATACCTCAACAGGAAAGTGCTGCCATGGCTGGCGTGGCGCTGACCCGGGACAATATCCAGTCCGTGCT
GGAACAATCGCTCGAAGCGCCCATCGTCTTGAGTTTTTTCGCGCCGTCACACCCAGACAGCGTGGCGATGAATACTCGCC
TGGCGCAGGTGATAAAGGGTCGCGGTGTGCTGGCGACAGTGAACTGTGAAACAGAGATGGAAATCGCATCCTATTTTCGC
ATTCAGGCGTTGCCAACTGTGCTGGTGATAAGCCAGGGCCAACCGGTCGACGGTTTTGCCGGCGATAAAACCGATGCAGA
GCTTGATGCCATGCTGTCTCAGCACCTGCCTCAGGCCTGGAAGCAAGTATTGCTGCAGGCGAAGCAAACACTGGCCGATG
GACAAGGTGCGGATGCCTTGGCGCTTCTTAAGAGCATCGAAATGGATGCTGCAGCCATAGGCGCCGAGTGGACGCTGCTG
ATGGCAGAGGCGGAAATTGCACAGGGCGAGCTCAGTAGCGCTGAGCTGCGTTTGGCCGCTGTGGGTCTTGCCGATCAGGA
CGCCCATTACCACAGCCTCAAGGCAAAACTCGCGCTGGCCAGAGAGGCGGCGGATACCCCAGAGGTTAGGGAGCTGCAAA
GCCGGTTCGCCAATGAATCCGACAATCAGGCGCTGCGGATTGAGCTTGCCAGGGCGTTGGCACAGGCCAAGCGTGAAGAA
GAAGCGCTGGAGCTGCTCTTTGACGTGCTTCAACGGGATCTCGGCGCTGAAGGCGGTGAAGTAAAACAAGCGTTTATGGG
TATTTTAACGGCCATGGGGCAGGGCAGCAGTATCGCCAATGGCTTCAGACGCAAACTTTACAGCCTGCTTTACTGA

Upstream 100 bases:

>100_bases
AACCAGATGCTGCTTAAATCGGTTGGCTAAACTGATTGCGGGGGCGAATGCCCCCGTTTGTCTTTTTGATAATGGCTTTT
TACATTCAGGGGAAGCACCT

Downstream 100 bases:

>100_bases
ATAAAAGCCTGCGCCGATTTAGGCACTTTTTTATGCCAACTGAGGCTAAAGTCGAAAGAGCAGGCCTTCTAAAGCGCGGG
TTTATGTGCGAAGATCGCCG

Product: putative thioredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTQGIPQQESAAMAGVALTRDNIQSVLEQSLEAPIVLSFFAPSHPDSVAMNTRLAQVIKGRGVLATVNCETEMEIASYFR
IQALPTVLVISQGQPVDGFAGDKTDAELDAMLSQHLPQAWKQVLLQAKQTLADGQGADALALLKSIEMDAAAIGAEWTLL
MAEAEIAQGELSSAELRLAAVGLADQDAHYHSLKAKLALAREAADTPEVRELQSRFANESDNQALRIELARALAQAKREE
EALELLFDVLQRDLGAEGGEVKQAFMGILTAMGQGSSIANGFRRKLYSLLY

Sequences:

>Translated_291_residues
MTQGIPQQESAAMAGVALTRDNIQSVLEQSLEAPIVLSFFAPSHPDSVAMNTRLAQVIKGRGVLATVNCETEMEIASYFR
IQALPTVLVISQGQPVDGFAGDKTDAELDAMLSQHLPQAWKQVLLQAKQTLADGQGADALALLKSIEMDAAAIGAEWTLL
MAEAEIAQGELSSAELRLAAVGLADQDAHYHSLKAKLALAREAADTPEVRELQSRFANESDNQALRIELARALAQAKREE
EALELLFDVLQRDLGAEGGEVKQAFMGILTAMGQGSSIANGFRRKLYSLLY
>Mature_290_residues
TQGIPQQESAAMAGVALTRDNIQSVLEQSLEAPIVLSFFAPSHPDSVAMNTRLAQVIKGRGVLATVNCETEMEIASYFRI
QALPTVLVISQGQPVDGFAGDKTDAELDAMLSQHLPQAWKQVLLQAKQTLADGQGADALALLKSIEMDAAAIGAEWTLLM
AEAEIAQGELSSAELRLAAVGLADQDAHYHSLKAKLALAREAADTPEVRELQSRFANESDNQALRIELARALAQAKREEE
ALELLFDVLQRDLGAEGGEVKQAFMGILTAMGQGSSIANGFRRKLYSLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=282, Percent_Identity=38.2978723404255, Blast_Score=179, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31302; Mature: 31171

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQGIPQQESAAMAGVALTRDNIQSVLEQSLEAPIVLSFFAPSHPDSVAMNTRLAQVIKG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
RGVLATVNCETEMEIASYFRIQALPTVLVISQGQPVDGFAGDKTDAELDAMLSQHLPQAW
CCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KQVLLQAKQTLADGQGADALALLKSIEMDAAAIGAEWTLLMAEAEIAQGELSSAELRLAA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHEEEEE
VGLADQDAHYHSLKAKLALAREAADTPEVRELQSRFANESDNQALRIELARALAQAKREE
ECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
EALELLFDVLQRDLGAEGGEVKQAFMGILTAMGQGSSIANGFRRKLYSLLY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQGIPQQESAAMAGVALTRDNIQSVLEQSLEAPIVLSFFAPSHPDSVAMNTRLAQVIKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
RGVLATVNCETEMEIASYFRIQALPTVLVISQGQPVDGFAGDKTDAELDAMLSQHLPQAW
CCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KQVLLQAKQTLADGQGADALALLKSIEMDAAAIGAEWTLLMAEAEIAQGELSSAELRLAA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHEEEEE
VGLADQDAHYHSLKAKLALAREAADTPEVRELQSRFANESDNQALRIELARALAQAKREE
ECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
EALELLFDVLQRDLGAEGGEVKQAFMGILTAMGQGSSIANGFRRKLYSLLY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]