| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is htpG
Identifier: 119774450
GI number: 119774450
Start: 1596151
End: 1598064
Strand: Direct
Name: htpG
Synonym: Sama_1313
Alternate gene names: 119774450
Gene position: 1596151-1598064 (Clockwise)
Preceding gene: 119774449
Following gene: 119774451
Centisome position: 37.07
GC content: 54.91
Gene sequence:
>1914_bases ATGTCGCATCAAGAAACCCATGGTTTTCAAACAGAAGTCAAACAGCTTTTGCATTTGATGATCCACTCTTTGTACTCCAA CAAAGAAATCTTTTTGCGTGAACTGGTCTCCAATGCCGCCGACGCCGCTGACAAGCTGCGTTACCTGGCGCTGACCAACG ACAGCCTGTATGAGGGTGACGGTGAGCTGCGGGTACGTGTGAGTGCCGATAAAGACAAGGGCACAGTGACCATAGAAGAC AATGGCATTGGTATGACCCGCGATGGCGTTATCGAACACCTGGGCACCATCGCCAAATCGGGTACTGCCGAGTTCTTTAA AAACCTCTCCGGCGACAGCGCCAAAGACTCGCAGCTGATTGGTCAGTTCGGTGTGGGTTTCTATTCGGCCTTTATCGTCG CCAAGCGCGTTGAGGTGTTTACCCGCGCCGCCGGTCATAGCGCCGACGAAGGGGTGAAGTGGGAGTCGGAAGGTGAAGGT AACTTCAGCGTCGAAACCATCACCAAAGCTGAGCGCGGCACCAAAATCGTGCTGCACCTGCGTGATGAAGAAAAGGAATT TGCCGATGACTGGCGCCTGCGTTCCATCATCACCAAGTACTCAGATCATATCTCCATCCCGGTAGAGATGTATCAGGAAG GCACCCCTGAGCGTGACGGTCCCGATGGCGAGAAGATTCCTGCCACCGAAGGTCAGTGGAAGGCTATGAACAAGGCCACC GCCCTGTGGACCCGCAGCAAGTCAGACGTGAGCGACGAAGAGTACAAAGAATTCTACAAGCACATTTCCCACGACTTTGC TGATCCTCTGGATTGGAGCCACAACAAGGTTGAAGGTAATCAGGAATATACCAGCCTGCTGTATATCCCGGCCAAGGCCC CCTGGGACCTGTGGAACCGTGACCGCAAGCATGGGCTGAAGCTGTTTGTGCAGCGGGTGTTCATCATGGATGACGCTGAG CAGTTTATGCCATCTTACCTGCGTTTCGTGCAGGGCTTGATTGACTCCAACGACTTGCCGCTGAACGTGAGCCGCGAAAT CCTGCAGGACAATAAAGTCACGCGCAATCTGCGTCAGGCATTGACCAAGCGTGTGCTGTCGATGCTGGAAAAGCTGGCCA AAGACGATGCCGACAAGTATCAGCAGTTCTGGGCAGAGTTTGGTACCGTGCTCAAAGAAGGTCCGGCGGAAGATTTTGCC AACCGTGAGCGTATTGCCGGTTTGCTGCGTTTTGCCTCAACCCACACGGGTGATGCGACGCCGTCAGTGTCGCTGGATGA TTACATCGGCCGCATGAAGGAAGGTCAGGAAAAGATTTACTACATAGTGGCCGACAGCCACGAGGCCGCGGCCAACAGCC CACACCTGGAGCTGTTGAAGAAGAAGGGCATCGAAGTGCTGCTGCTGTCTGAGCGCATCGACGAGTGGCTGATTAACCAC CTGCACGACTATAAAGAAAAGGCTCTGCACTCTGTGACCCGCGGCGATCTGGATCTCGGCGCCCTAGAAGACGAGGCCGA GAAGGCCGCGCAGGAGAAATTGGCCCAGGAGTCTGAGCCCTTGGTAGAGCGATTCAAGTCTGCTCTGGGTGATAAAGTCA GCGACGTGAAAATCACGACCCGTCTGACCGATACGCCCGCCTGTGTGGTGACAGGGGAAGGCGAAATGTCGAGCCAGATG ATCAAGCTGATGCAGGCCGCTGGTCAACCAGTACCTGAATCCAAGCCAACGCTTGAACTTAACCCAACACACCCGCTGGT GGCCCGTTTGGATAAGGAGCAGGATGAAACAGCCTTCGCCGAGTGGGCTGAAATGCTGCTCGCACAGGCGACCCTGTCTG AGCGTGGCAGCCTGGCAGACCCATCTGCCTTCATCAAGCTGGTGAACCAGATGCTGCTTAAATCGGTTGGCTAA
Upstream 100 bases:
>100_bases TCCCCTTGAAAAGTGTTTCATCGCCCCCATTTCTGTTCTATCCGGGCAGTATGCCCCAATACCTGAATGTTTTTGTAACA CTGAAAAAAAGGGAACTGAG
Downstream 100 bases:
>100_bases ACTGATTGCGGGGGCGAATGCCCCCGTTTGTCTTTTTGATAATGGCTTTTTACATTCAGGGGAAGCACCTATGACTCAAG GGATACCTCAACAGGAAAGT
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MSHQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDSLYEGDGELRVRVSADKDKGTVTIED NGIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDSAKDSQLIGQFGVGFYSAFIVAKRVEVFTRAAGHSADEGVKWESEGEG NFSVETITKAERGTKIVLHLRDEEKEFADDWRLRSIITKYSDHISIPVEMYQEGTPERDGPDGEKIPATEGQWKAMNKAT ALWTRSKSDVSDEEYKEFYKHISHDFADPLDWSHNKVEGNQEYTSLLYIPAKAPWDLWNRDRKHGLKLFVQRVFIMDDAE QFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTRNLRQALTKRVLSMLEKLAKDDADKYQQFWAEFGTVLKEGPAEDFA NRERIAGLLRFASTHTGDATPSVSLDDYIGRMKEGQEKIYYIVADSHEAAANSPHLELLKKKGIEVLLLSERIDEWLINH LHDYKEKALHSVTRGDLDLGALEDEAEKAAQEKLAQESEPLVERFKSALGDKVSDVKITTRLTDTPACVVTGEGEMSSQM IKLMQAAGQPVPESKPTLELNPTHPLVARLDKEQDETAFAEWAEMLLAQATLSERGSLADPSAFIKLVNQMLLKSVG
Sequences:
>Translated_637_residues MSHQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDSLYEGDGELRVRVSADKDKGTVTIED NGIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDSAKDSQLIGQFGVGFYSAFIVAKRVEVFTRAAGHSADEGVKWESEGEG NFSVETITKAERGTKIVLHLRDEEKEFADDWRLRSIITKYSDHISIPVEMYQEGTPERDGPDGEKIPATEGQWKAMNKAT ALWTRSKSDVSDEEYKEFYKHISHDFADPLDWSHNKVEGNQEYTSLLYIPAKAPWDLWNRDRKHGLKLFVQRVFIMDDAE QFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTRNLRQALTKRVLSMLEKLAKDDADKYQQFWAEFGTVLKEGPAEDFA NRERIAGLLRFASTHTGDATPSVSLDDYIGRMKEGQEKIYYIVADSHEAAANSPHLELLKKKGIEVLLLSERIDEWLINH LHDYKEKALHSVTRGDLDLGALEDEAEKAAQEKLAQESEPLVERFKSALGDKVSDVKITTRLTDTPACVVTGEGEMSSQM IKLMQAAGQPVPESKPTLELNPTHPLVARLDKEQDETAFAEWAEMLLAQATLSERGSLADPSAFIKLVNQMLLKSVG >Mature_636_residues SHQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDSLYEGDGELRVRVSADKDKGTVTIEDN GIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDSAKDSQLIGQFGVGFYSAFIVAKRVEVFTRAAGHSADEGVKWESEGEGN FSVETITKAERGTKIVLHLRDEEKEFADDWRLRSIITKYSDHISIPVEMYQEGTPERDGPDGEKIPATEGQWKAMNKATA LWTRSKSDVSDEEYKEFYKHISHDFADPLDWSHNKVEGNQEYTSLLYIPAKAPWDLWNRDRKHGLKLFVQRVFIMDDAEQ FMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTRNLRQALTKRVLSMLEKLAKDDADKYQQFWAEFGTVLKEGPAEDFAN RERIAGLLRFASTHTGDATPSVSLDDYIGRMKEGQEKIYYIVADSHEAAANSPHLELLKKKGIEVLLLSERIDEWLINHL HDYKEKALHSVTRGDLDLGALEDEAEKAAQEKLAQESEPLVERFKSALGDKVSDVKITTRLTDTPACVVTGEGEMSSQMI KLMQAAGQPVPESKPTLELNPTHPLVARLDKEQDETAFAEWAEMLLAQATLSERGSLADPSAFIKLVNQMLLKSVG
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI20149594, Length=689, Percent_Identity=36.8650217706821, Blast_Score=426, Evalue=1e-119, Organism=Homo sapiens, GI4507677, Length=686, Percent_Identity=37.3177842565598, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI155722983, Length=645, Percent_Identity=35.0387596899225, Blast_Score=386, Evalue=1e-107, Organism=Homo sapiens, GI154146191, Length=413, Percent_Identity=36.8038740920097, Blast_Score=273, Evalue=5e-73, Organism=Homo sapiens, GI153792590, Length=413, Percent_Identity=36.8038740920097, Blast_Score=270, Evalue=3e-72, Organism=Escherichia coli, GI1786679, Length=633, Percent_Identity=67.7725118483412, Blast_Score=882, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=672, Percent_Identity=37.6488095238095, Blast_Score=440, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17542208, Length=682, Percent_Identity=37.683284457478, Blast_Score=410, Evalue=1e-114, Organism=Caenorhabditis elegans, GI115535205, Length=659, Percent_Identity=32.9286798179059, Blast_Score=323, Evalue=1e-88, Organism=Caenorhabditis elegans, GI115535167, Length=439, Percent_Identity=35.7630979498861, Blast_Score=267, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6323840, Length=680, Percent_Identity=37.2058823529412, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6325016, Length=684, Percent_Identity=36.8421052631579, Blast_Score=444, Evalue=1e-125, Organism=Drosophila melanogaster, GI17647529, Length=687, Percent_Identity=37.7001455604076, Blast_Score=462, Evalue=1e-130, Organism=Drosophila melanogaster, GI21357739, Length=682, Percent_Identity=38.2697947214076, Blast_Score=424, Evalue=1e-119, Organism=Drosophila melanogaster, GI24586016, Length=652, Percent_Identity=35.2760736196319, Blast_Score=381, Evalue=1e-105,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_SHEAM (A1S564)
Other databases:
- EMBL: CP000507 - RefSeq: YP_927190.1 - ProteinModelPortal: A1S564 - SMR: A1S564 - STRING: A1S564 - GeneID: 4603565 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_1313 - NMPDR: fig|326297.7.peg.1240 - eggNOG: COG0326 - HOGENOM: HBG631012 - OMA: AIYYITA - PhylomeDB: A1S564 - ProtClustDB: PRK05218 - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 71637; Mature: 71506
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDSLYEGD CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC GELRVRVSADKDKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDSAKDSQLI CCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHH GQFGVGFYSAFIVAKRVEVFTRAAGHSADEGVKWESEGEGNFSVETITKAERGTKIVLHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCEEEEEE RDEEKEFADDWRLRSIITKYSDHISIPVEMYQEGTPERDGPDGEKIPATEGQWKAMNKAT CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALWTRSKSDVSDEEYKEFYKHISHDFADPLDWSHNKVEGNQEYTSLLYIPAKAPWDLWNR HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH DRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTRNLRQA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHH LTKRVLSMLEKLAKDDADKYQQFWAEFGTVLKEGPAEDFANRERIAGLLRFASTHTGDAT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC PSVSLDDYIGRMKEGQEKIYYIVADSHEAAANSPHLELLKKKGIEVLLLSERIDEWLINH CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHH LHDYKEKALHSVTRGDLDLGALEDEAEKAAQEKLAQESEPLVERFKSALGDKVSDVKITT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEE RLTDTPACVVTGEGEMSSQMIKLMQAAGQPVPESKPTLELNPTHPLVARLDKEQDETAFA EECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHCCCCHHHHHH EWAEMLLAQATLSERGSLADPSAFIKLVNQMLLKSVG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDSLYEGD CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC GELRVRVSADKDKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDSAKDSQLI CCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHH GQFGVGFYSAFIVAKRVEVFTRAAGHSADEGVKWESEGEGNFSVETITKAERGTKIVLHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCEEEEEE RDEEKEFADDWRLRSIITKYSDHISIPVEMYQEGTPERDGPDGEKIPATEGQWKAMNKAT CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALWTRSKSDVSDEEYKEFYKHISHDFADPLDWSHNKVEGNQEYTSLLYIPAKAPWDLWNR HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH DRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTRNLRQA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHH LTKRVLSMLEKLAKDDADKYQQFWAEFGTVLKEGPAEDFANRERIAGLLRFASTHTGDAT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC PSVSLDDYIGRMKEGQEKIYYIVADSHEAAANSPHLELLKKKGIEVLLLSERIDEWLINH CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHH LHDYKEKALHSVTRGDLDLGALEDEAEKAAQEKLAQESEPLVERFKSALGDKVSDVKITT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEE RLTDTPACVVTGEGEMSSQMIKLMQAAGQPVPESKPTLELNPTHPLVARLDKEQDETAFA EECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHCCCCHHHHHH EWAEMLLAQATLSERGSLADPSAFIKLVNQMLLKSVG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA