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The map label for this gene is recR

Identifier: 119774449

GI number: 119774449

Start: 1595370

End: 1595969

Strand: Direct

Name: recR

Synonym: Sama_1312

Alternate gene names: 119774449

Gene position: 1595370-1595969 (Clockwise)

Preceding gene: 119774448

Following gene: 119774450

Centisome position: 37.05

GC content: 60.67

Gene sequence:

>600_bases
ATGAAATTCAGTCCGCTGGTGGATGAGCTTATTCAAAGTCTGCGTTGCCTGCCGGGAGTGGGGCCTAAATCGGCCCAGCG
CATGGCCTTTGCGCTGCTGGAAAGCGATCGTAAAGCGGGCATCCGCCTGGCCGATACCCTGTCCCGGGCCATGAGTGACG
TGGGCCACTGCCAAAAGTGCCGTACCTTCACCGAACAGTCTCTGTGCCCGATTTGCTCCAGCAGTAGGCGCGGAGAGGCC
GACACCCTGTGTGTGGTGGAAACCCCGGCGGATGTACTGGCCATCGAGTCCGGTGGCCATTTTCAGGGTCGCTATTTCGT
GCTGCAGGGGCACTTATCTCCCCTTGACGGCATAGGGCCTGAGGAGCTGGGGCTTTCTCTCCTTGAAGGCCAATTGGTCG
GCGGTGGTATCAGTGAGCTGATTTTGGCCACCAACCCTACCGTGGAAGGGGACGCCACGGCACACTACATTGCCGATATT
GCCCGCAGAGCAGGGGTAGCGGTGAGCCGGATTGCCCACGGTGTGCCCGTCGGCGGTGAGCTTGAGTACGTCGACAGCAC
CACCCTCGCGCTGAGCTTTAACGGCCGCTTGCCGCTTTAA

Upstream 100 bases:

>100_bases
CGCCGTGTTGAAGAAAACCAGAAAACCAAGATGGCGGAAGTGACCGGTGGCATGCAACTGCCTCCCGGCATGAAGATGCC
ATTCTGAGGAAACGCTTCCC

Downstream 100 bases:

>100_bases
ACCCGTTAATGATGCAAAACGCCCCGCGTTACCGGGGCGTTTTTGTTGTTTTTTTGCCCGCTCAAATCTCGCTTGCACCC
TTCCCCTTGAAAAGTGTTTC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFALLESDRKAGIRLADTLSRAMSDVGHCQKCRTFTEQSLCPICSSSRRGEA
DTLCVVETPADVLAIESGGHFQGRYFVLQGHLSPLDGIGPEELGLSLLEGQLVGGGISELILATNPTVEGDATAHYIADI
ARRAGVAVSRIAHGVPVGGELEYVDSTTLALSFNGRLPL

Sequences:

>Translated_199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFALLESDRKAGIRLADTLSRAMSDVGHCQKCRTFTEQSLCPICSSSRRGEA
DTLCVVETPADVLAIESGGHFQGRYFVLQGHLSPLDGIGPEELGLSLLEGQLVGGGISELILATNPTVEGDATAHYIADI
ARRAGVAVSRIAHGVPVGGELEYVDSTTLALSFNGRLPL
>Mature_199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFALLESDRKAGIRLADTLSRAMSDVGHCQKCRTFTEQSLCPICSSSRRGEA
DTLCVVETPADVLAIESGGHFQGRYFVLQGHLSPLDGIGPEELGLSLLEGQLVGGGISELILATNPTVEGDATAHYIADI
ARRAGVAVSRIAHGVPVGGELEYVDSTTLALSFNGRLPL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=64.7959183673469, Blast_Score=266, Evalue=9e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_SHEAM (A1S563)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927189.1
- ProteinModelPortal:   A1S563
- SMR:   A1S563
- STRING:   A1S563
- GeneID:   4603564
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1312
- NMPDR:   fig|326297.7.peg.1239
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   A1S563
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21045; Mature: 21045

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFALLESDRKAGIRLADTLSRAMSDVGHCQKC
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RTFTEQSLCPICSSSRRGEADTLCVVETPADVLAIESGGHFQGRYFVLQGHLSPLDGIGP
HHHHHHHCCCHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCCCCH
EELGLSLLEGQLVGGGISELILATNPTVEGDATAHYIADIARRAGVAVSRIAHGVPVGGE
HHHHHHHHCCEECCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCE
LEYVDSTTLALSFNGRLPL
EEEECCEEEEEEECCCCCC
>Mature Secondary Structure
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFALLESDRKAGIRLADTLSRAMSDVGHCQKC
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RTFTEQSLCPICSSSRRGEADTLCVVETPADVLAIESGGHFQGRYFVLQGHLSPLDGIGP
HHHHHHHCCCHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCCCCH
EELGLSLLEGQLVGGGISELILATNPTVEGDATAHYIADIARRAGVAVSRIAHGVPVGGE
HHHHHHHHCCEECCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCE
LEYVDSTTLALSFNGRLPL
EEEECCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA