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The map label for this gene is ybaB [C]

Identifier: 119774448

GI number: 119774448

Start: 1595027

End: 1595356

Strand: Direct

Name: ybaB [C]

Synonym: Sama_1311

Alternate gene names: 119774448

Gene position: 1595027-1595356 (Clockwise)

Preceding gene: 119774447

Following gene: 119774449

Centisome position: 37.04

GC content: 51.82

Gene sequence:

>330_bases
ATGTTTGGAAAAGGCGGAATGGGCAACCTGATGAAGCAAGCCCAGATGATGCAGGAAAAAATGGCCAAGATGCAGGAAGA
AATTGCCCGCATGGAAGTCACAGGTGAGTCCGGTGCCGGCTTGGTGAAAGTGACCATGACAGGTACTCACAATGTACGCA
AAGTAGAAATCGACCCAAGTCTGCTGGAAGACGATAAAGAGCTGCTGGAAGACTTGGTAGCCGCAGCCTGTAACGATGCA
GCCCGCCGTGTTGAAGAAAACCAGAAAACCAAGATGGCGGAAGTGACCGGTGGCATGCAACTGCCTCCCGGCATGAAGAT
GCCATTCTGA

Upstream 100 bases:

>100_bases
ATGCCTCAGATTTCAGTAAGATTAGCCAACTTCATTTTCACCGTTCACAAATTCATTTTGCCCGCATGGCTGCGGGCCTC
AACCGAAAGAGATTAAGCGT

Downstream 100 bases:

>100_bases
GGAAACGCTTCCCATGAAATTCAGTCCGCTGGTGGATGAGCTTATTCAAAGTCTGCGTTGCCTGCCGGGAGTGGGGCCTA
AATCGGCCCAGCGCATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MFGKGGMGNLMKQAQMMQEKMAKMQEEIARMEVTGESGAGLVKVTMTGTHNVRKVEIDPSLLEDDKELLEDLVAAACNDA
ARRVEENQKTKMAEVTGGMQLPPGMKMPF

Sequences:

>Translated_109_residues
MFGKGGMGNLMKQAQMMQEKMAKMQEEIARMEVTGESGAGLVKVTMTGTHNVRKVEIDPSLLEDDKELLEDLVAAACNDA
ARRVEENQKTKMAEVTGGMQLPPGMKMPF
>Mature_109_residues
MFGKGGMGNLMKQAQMMQEKMAKMQEEIARMEVTGESGAGLVKVTMTGTHNVRKVEIDPSLLEDDKELLEDLVAAACNDA
ARRVEENQKTKMAEVTGGMQLPPGMKMPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=109, Percent_Identity=82.5688073394495, Blast_Score=186, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1311_SHEAM (A1S562)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927188.1
- ProteinModelPortal:   A1S562
- SMR:   A1S562
- STRING:   A1S562
- GeneID:   4603563
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1311
- NMPDR:   fig|326297.7.peg.1238
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- PhylomeDB:   A1S562
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11947; Mature: 11947

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
11.9 %Met     (Translated Protein)
12.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
11.9 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKGGMGNLMKQAQMMQEKMAKMQEEIARMEVTGESGAGLVKVTMTGTHNVRKVEIDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECHH
LLEDDKELLEDLVAAACNDAARRVEENQKTKMAEVTGGMQLPPGMKMPF
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGKGGMGNLMKQAQMMQEKMAKMQEEIARMEVTGESGAGLVKVTMTGTHNVRKVEIDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECHH
LLEDDKELLEDLVAAACNDAARRVEENQKTKMAEVTGGMQLPPGMKMPF
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA