The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774441

Identifier: 119774441

GI number: 119774441

Start: 1588539

End: 1588982

Strand: Direct

Name: 119774441

Synonym: Sama_1304

Alternate gene names: NA

Gene position: 1588539-1588982 (Clockwise)

Preceding gene: 119774438

Following gene: 119774442

Centisome position: 36.89

GC content: 53.38

Gene sequence:

>444_bases
ATGAACAGCATCAAGAAAACCGCCGCCGCAGTTGCACTGGGAAGCGTTGTTGTGGGCGCAGCGTTTGCCGCCGAAGCGCA
GGCCAACCCTTTTGGCTTCAATGAAATGCAAGCTGGTTACCAACTGGTGGGTGACGAAGGTAAATGTGGTGAAGGCAAGT
GTGGTGAAGGCAAGAAGGCCAAAGAGGGTAAGTGCGGCGAGGGTAAATGCGGTGAGGGCATGAAGGCCAAAGAAGGTAAG
TGCGGTGAAGGTAAGTGTGGCGAGGGCATGAAAAAAGGCCATGAGACTGCCGAAAAAGCCAAAGAAGGTAAGTGCGGCGA
AGGCAAATGTGGCGAAGGCATGAAAAAAGGCCAGGAAACTGCCGAAAAAGCCAAAGAAGGTAAGTGTGGTGAAGCCAAGG
GCACTGAAAAAGCCAAAGAAGGCAAGTGCGGCGGCGCTCACTGA

Upstream 100 bases:

>100_bases
AAAATTGAAATAAAAACAGGCCGCCATGGGTCTGGTAAATCAGACTGGCAGCAAAAGGCGGCCGTCATAACTCACTGAAA
CACACAGAAGGAAGAAGACT

Downstream 100 bases:

>100_bases
TATCAGGCTGCCACGCGGGAAATGACCCGCGTGGCATTTTATTCGCAGGCAGAGGTGAACACATGGCAGTATCCTCGCTG
GCCGGACTGGGGCTAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNSIKKTAAAVALGSVVVGAAFAAEAQANPFGFNEMQAGYQLVGDEGKCGEGKCGEGKKAKEGKCGEGKCGEGMKAKEGK
CGEGKCGEGMKKGHETAEKAKEGKCGEGKCGEGMKKGQETAEKAKEGKCGEAKGTEKAKEGKCGGAH

Sequences:

>Translated_147_residues
MNSIKKTAAAVALGSVVVGAAFAAEAQANPFGFNEMQAGYQLVGDEGKCGEGKCGEGKKAKEGKCGEGKCGEGMKAKEGK
CGEGKCGEGMKKGHETAEKAKEGKCGEGKCGEGMKKGQETAEKAKEGKCGEAKGTEKAKEGKCGGAH
>Mature_147_residues
MNSIKKTAAAVALGSVVVGAAFAAEAQANPFGFNEMQAGYQLVGDEGKCGEGKCGEGKKAKEGKCGEGKCGEGMKAKEGK
CGEGKCGEGMKKGHETAEKAKEGKCGEGKCGEGMKKGQETAEKAKEGKCGEAKGTEKAKEGKCGGAH

Specific function: Unknown

COG id: COG3767

COG function: function code S; Uncharacterized low-complexity protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14799; Mature: 14799

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIKKTAAAVALGSVVVGAAFAAEAQANPFGFNEMQAGYQLVGDEGKCGEGKCGEGKKA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCCCC
KEGKCGEGKCGEGMKAKEGKCGEGKCGEGMKKGHETAEKAKEGKCGEGKCGEGMKKGQET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AEKAKEGKCGEAKGTEKAKEGKCGGAH
HHHHHCCCCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MNSIKKTAAAVALGSVVVGAAFAAEAQANPFGFNEMQAGYQLVGDEGKCGEGKCGEGKKA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCCCC
KEGKCGEGKCGEGMKAKEGKCGEGKCGEGMKKGHETAEKAKEGKCGEGKCGEGMKKGQET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AEKAKEGKCGEAKGTEKAKEGKCGGAH
HHHHHCCCCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA