| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is pgi
Identifier: 119774049
GI number: 119774049
Start: 1101444
End: 1103081
Strand: Reverse
Name: pgi
Synonym: Sama_0912
Alternate gene names: 119774049
Gene position: 1103081-1101444 (Counterclockwise)
Preceding gene: 119774050
Following gene: 119774048
Centisome position: 25.62
GC content: 52.44
Gene sequence:
>1638_bases ATGAGTCGAGTGACCAATACTCCTGAATGGCAGAAACTGAAAGAATATTCCAACAAACTGCCTCATATGCGTGAACTTTT TGCGACTGACAGCGCACGTTTCGACAAAATGTCGCTGAAAGCCTGTGGTCTGTTTCTGGATTACTCCAAAAACCGCGTAA CAGAAGTCGTGCTGGGTGCCTTGTTCGATTTGGCAAAGCAAGCTCAGCTAGAAGCCCGCATCAACGCCATGTTCGCCGGT GATATTATCAACACCACTGAAAAGCGTGCCGTACTGCACACCGCACTGCGTGCGCCAAATGATGCTGTAGTTGAAGTGGA TGGTGTCAATGTGGTGCCGGAAGTCCATGCTACTCTGGATAAAATTGAATCCTTCGTTGCCTCAATTACCTCTGGCGAAT GGCGCGGTTACACGGGTAAAGCTATCACCGATATTGTCAGCATAGGTATTGGCGGCTCATTCCTCGGGCCCAAAATTGTC ACCCAGGCGCTGCGTCCATACTGGACAGGCAAGCTGAACTGTCACTTTGTTGCCAACGTGGATGCCACCTCGCTGGTTGA AAAGCTCAAGCTGGTCGACCCGGAAACAACTCTGTTCCTGATGTCATCCAAGTCGTTTGGCACTCAGGAAACCCTCACCA ATACCCTGAGTGCCCGCGACTGGTTCCTGCAAAGCGGTGCTTCTCAGGCTGATGTAGCCAAACACTTTGCCGCTGTGACC TCCAACGTGGCCAAGGCGACTGATTTCGGTATCGATGAAGCCAATGTCTTCCCAATGTGGGACTGGGTTGGTGGTCGCTA CTCACTCTGGTCTGCCATTGGTCTGCCTATTGCACTGATGGTTGGCATGGATAACTACCGGGCGCTGCTCGCCGGTGCCC GCAGTATGGACGAACACTTCACCTCGGCGCCGCTGGCTGAGAACATGCCGGTGATTATGGGTCTGCTGTCGGTGTGGTAT GGCAACTTTTTCAATGCCCAGTCACACGTAGTGCTCACCTATGACCACTACCTGCGAGGTTTGCCCGCTTACTTCCAGCA GCTTGACATGGAAAGTAACGGCAAGTCTGCCATGATGGATGGCGAAACCGTGGATTTCAGCACTGGCCCGGTTATCTGGG GCGGTGAAGGTACCAATGGTCAGCATGCCTATCACCAGTTGTTACATCAGGGCACTGCACTCATTCCTGCCGACTTCATT ATGCCGCTACAAAGTCATAATCCGCTGGGTGAACATCATGTGCAGCTTGCATCCAATTGCTTCGGACAAACCCAGGCTTT GATGCAGGGGCGCACCTACGAAGAAGCCTTGGCTGAACTTGCAGCAAGCAATCTCAGTGATGATGAGAAGAGTCTTATCG CCCGTCATAAGGTTATGGAGGGTAACAAGCCGAGCAACACCCTGCTGATGGACAAACTGACACCTTCCACATTGGGTGCA CTGATAGCGCTGTACGAGCACAGAACCTTTGTTCAGGGTGTGATTTGGGATATTAACTCTTTCGACCAGTGGGGCGTGGA GCTGGGAAAAACGCTGGGCAATGACGTGCTGGCGCGCCTGACCGCCGATGAGGATGCCAGCGCACTGGACTCCTCCAGTA ACGCGCTCATTAATTTGTTCCGCAAAGGACAAATTTAG
Upstream 100 bases:
>100_bases GAAAAGCTGGCCGAAGGGATCCGTAACTTCGCCATCGATCAAGGCAAACTGGAAGAGATGCTCAAGGCTAAACTGGCCTG ATAACGCGGGGAAGCAACGA
Downstream 100 bases:
>100_bases TCAGATGTTTTCTCTTTAATAATCAAAGGCCGATAATTTATCGGCCTTTTTATTTAAATTCAGTCGGTTATTTAATCTTC TACGAAGATCATCCAAGTTT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MSRVTNTPEWQKLKEYSNKLPHMRELFATDSARFDKMSLKACGLFLDYSKNRVTEVVLGALFDLAKQAQLEARINAMFAG DIINTTEKRAVLHTALRAPNDAVVEVDGVNVVPEVHATLDKIESFVASITSGEWRGYTGKAITDIVSIGIGGSFLGPKIV TQALRPYWTGKLNCHFVANVDATSLVEKLKLVDPETTLFLMSSKSFGTQETLTNTLSARDWFLQSGASQADVAKHFAAVT SNVAKATDFGIDEANVFPMWDWVGGRYSLWSAIGLPIALMVGMDNYRALLAGARSMDEHFTSAPLAENMPVIMGLLSVWY GNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSAMMDGETVDFSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFI MPLQSHNPLGEHHVQLASNCFGQTQALMQGRTYEEALAELAASNLSDDEKSLIARHKVMEGNKPSNTLLMDKLTPSTLGA LIALYEHRTFVQGVIWDINSFDQWGVELGKTLGNDVLARLTADEDASALDSSSNALINLFRKGQI
Sequences:
>Translated_545_residues MSRVTNTPEWQKLKEYSNKLPHMRELFATDSARFDKMSLKACGLFLDYSKNRVTEVVLGALFDLAKQAQLEARINAMFAG DIINTTEKRAVLHTALRAPNDAVVEVDGVNVVPEVHATLDKIESFVASITSGEWRGYTGKAITDIVSIGIGGSFLGPKIV TQALRPYWTGKLNCHFVANVDATSLVEKLKLVDPETTLFLMSSKSFGTQETLTNTLSARDWFLQSGASQADVAKHFAAVT SNVAKATDFGIDEANVFPMWDWVGGRYSLWSAIGLPIALMVGMDNYRALLAGARSMDEHFTSAPLAENMPVIMGLLSVWY GNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSAMMDGETVDFSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFI MPLQSHNPLGEHHVQLASNCFGQTQALMQGRTYEEALAELAASNLSDDEKSLIARHKVMEGNKPSNTLLMDKLTPSTLGA LIALYEHRTFVQGVIWDINSFDQWGVELGKTLGNDVLARLTADEDASALDSSSNALINLFRKGQI >Mature_544_residues SRVTNTPEWQKLKEYSNKLPHMRELFATDSARFDKMSLKACGLFLDYSKNRVTEVVLGALFDLAKQAQLEARINAMFAGD IINTTEKRAVLHTALRAPNDAVVEVDGVNVVPEVHATLDKIESFVASITSGEWRGYTGKAITDIVSIGIGGSFLGPKIVT QALRPYWTGKLNCHFVANVDATSLVEKLKLVDPETTLFLMSSKSFGTQETLTNTLSARDWFLQSGASQADVAKHFAAVTS NVAKATDFGIDEANVFPMWDWVGGRYSLWSAIGLPIALMVGMDNYRALLAGARSMDEHFTSAPLAENMPVIMGLLSVWYG NFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSAMMDGETVDFSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFIM PLQSHNPLGEHHVQLASNCFGQTQALMQGRTYEEALAELAASNLSDDEKSLIARHKVMEGNKPSNTLLMDKLTPSTLGAL IALYEHRTFVQGVIWDINSFDQWGVELGKTLGNDVLARLTADEDASALDSSSNALINLFRKGQI
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Homo sapiens, GI18201905, Length=552, Percent_Identity=50, Blast_Score=577, Evalue=1e-164, Organism=Homo sapiens, GI296080693, Length=552, Percent_Identity=46.7391304347826, Blast_Score=520, Evalue=1e-147, Organism=Escherichia coli, GI1790457, Length=540, Percent_Identity=52.7777777777778, Blast_Score=595, Evalue=1e-171, Organism=Caenorhabditis elegans, GI71996708, Length=539, Percent_Identity=51.39146567718, Blast_Score=555, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71996703, Length=539, Percent_Identity=51.39146567718, Blast_Score=554, Evalue=1e-158, Organism=Saccharomyces cerevisiae, GI6319673, Length=549, Percent_Identity=49.7267759562842, Blast_Score=546, Evalue=1e-156, Organism=Drosophila melanogaster, GI24651916, Length=542, Percent_Identity=53.1365313653137, Blast_Score=575, Evalue=1e-164, Organism=Drosophila melanogaster, GI24651914, Length=542, Percent_Identity=53.1365313653137, Blast_Score=575, Evalue=1e-164, Organism=Drosophila melanogaster, GI17737445, Length=542, Percent_Identity=53.1365313653137, Blast_Score=575, Evalue=1e-164,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_SHEAM (A1S413)
Other databases:
- EMBL: CP000507 - RefSeq: YP_926789.1 - ProteinModelPortal: A1S413 - SMR: A1S413 - STRING: A1S413 - GeneID: 4603164 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0912 - NMPDR: fig|326297.7.peg.859 - eggNOG: COG0166 - HOGENOM: HBG352954 - OMA: GPKIVSQ - PhylomeDB: A1S413 - ProtClustDB: PRK00179 - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 - Gene3D: G3DSA:1.10.1390.10 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 59792; Mature: 59660
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 351-351 ACT_SITE 382-382 ACT_SITE 510-510
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVTNTPEWQKLKEYSNKLPHMRELFATDSARFDKMSLKACGLFLDYSKNRVTEVVLGA CCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHH LFDLAKQAQLEARINAMFAGDIINTTEKRAVLHTALRAPNDAVVEVDGVNVVPEVHATLD HHHHHHHHHHHHHHHHEEECCHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH KIESFVASITSGEWRGYTGKAITDIVSIGIGGSFLGPKIVTQALRPYWTGKLNCHFVANV HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCHHCCCCEEEEEEECC DATSLVEKLKLVDPETTLFLMSSKSFGTQETLTNTLSARDWFLQSGASQADVAKHFAAVT CHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SNVAKATDFGIDEANVFPMWDWVGGRYSLWSAIGLPIALMVGMDNYRALLAGARSMDEHF HHHHHHHHCCCCCCCCEEEHHCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH TSAPLAENMPVIMGLLSVWYGNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSAMMD CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHCCCCCCCCEEEC GETVDFSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFIMPLQSHNPLGEHHVQLASNC CCEEECCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH FGQTQALMQGRTYEEALAELAASNLSDDEKSLIARHKVMEGNKPSNTLLMDKLTPSTLGA HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH LIALYEHRTFVQGVIWDINSFDQWGVELGKTLGNDVLARLTADEDASALDSSSNALINLF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHH RKGQI HCCCC >Mature Secondary Structure SRVTNTPEWQKLKEYSNKLPHMRELFATDSARFDKMSLKACGLFLDYSKNRVTEVVLGA CCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHH LFDLAKQAQLEARINAMFAGDIINTTEKRAVLHTALRAPNDAVVEVDGVNVVPEVHATLD HHHHHHHHHHHHHHHHEEECCHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH KIESFVASITSGEWRGYTGKAITDIVSIGIGGSFLGPKIVTQALRPYWTGKLNCHFVANV HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCHHCCCCEEEEEEECC DATSLVEKLKLVDPETTLFLMSSKSFGTQETLTNTLSARDWFLQSGASQADVAKHFAAVT CHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SNVAKATDFGIDEANVFPMWDWVGGRYSLWSAIGLPIALMVGMDNYRALLAGARSMDEHF HHHHHHHHCCCCCCCCEEEHHCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH TSAPLAENMPVIMGLLSVWYGNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSAMMD CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHCCCCCCCCEEEC GETVDFSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFIMPLQSHNPLGEHHVQLASNC CCEEECCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH FGQTQALMQGRTYEEALAELAASNLSDDEKSLIARHKVMEGNKPSNTLLMDKLTPSTLGA HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH LIALYEHRTFVQGVIWDINSFDQWGVELGKTLGNDVLARLTADEDASALDSSSNALINLF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHH RKGQI HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA