The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773803

Identifier: 119773803

GI number: 119773803

Start: 820102

End: 820605

Strand: Reverse

Name: 119773803

Synonym: Sama_0665

Alternate gene names: NA

Gene position: 820605-820102 (Counterclockwise)

Preceding gene: 119773809

Following gene: 119773799

Centisome position: 19.06

GC content: 50.4

Gene sequence:

>504_bases
ATGGACGTGTTTTTGCTGTTGCTGGCTCTGGCTTTGTCAGTAGGCTGGTTTGTTTACAGTAAGTATCAATCGGATCACTG
GCATCAACGAAACAGGGAATGCAGACACAAAAAGCGCGCTGTTGTGCCCCACGAGTTGGAGATACCCAAGGATTATGGTG
TCTATGAATCACTCGAAGAGGTTGAGCATCAGGCCAGAATCAATGGCGCGCGACCACAGGGGCTGCATCCATTTCATTGT
GTCAGTGTGGTTGCAGGCCTGAATGACTGTAACGCCAGACAGGCCATTGATGGGCACAGATTTCTATCCGGTGAAGCACC
TGCTATCCCGCTGAAAGGTTGTAACGCAGAAACTTGCCATTGCCATTATCAGCACTTTGAAGACCGCCGGGTACCACACT
CAGATCGTCGGGCCAGGTATGGGCTGACCGAAGAGCTGTATGGACATTTCGGTGAAAAAAACAAACGTCAACTCCCCAAA
GGGCGACGCATTACCGATGTTTAG

Upstream 100 bases:

>100_bases
TTACTCAATGCCTTACAATATTGCACTGCAAGCAAACCGCGAATTATCTCAAACTAAACTAAACTGAAACTTAATTGTTT
ACCGACAGAGGGCGAGCATC

Downstream 100 bases:

>100_bases
CAGACAATATCCGGACGGGTTTCACGGAATATTGGCAGTTCGCGTACCTCTTCAAACCACAGTGTCAGAGCGGGAGCAAG
GTTACGCCATTCCAGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MDVFLLLLALALSVGWFVYSKYQSDHWHQRNRECRHKKRAVVPHELEIPKDYGVYESLEEVEHQARINGARPQGLHPFHC
VSVVAGLNDCNARQAIDGHRFLSGEAPAIPLKGCNAETCHCHYQHFEDRRVPHSDRRARYGLTEELYGHFGEKNKRQLPK
GRRITDV

Sequences:

>Translated_167_residues
MDVFLLLLALALSVGWFVYSKYQSDHWHQRNRECRHKKRAVVPHELEIPKDYGVYESLEEVEHQARINGARPQGLHPFHC
VSVVAGLNDCNARQAIDGHRFLSGEAPAIPLKGCNAETCHCHYQHFEDRRVPHSDRRARYGLTEELYGHFGEKNKRQLPK
GRRITDV
>Mature_167_residues
MDVFLLLLALALSVGWFVYSKYQSDHWHQRNRECRHKKRAVVPHELEIPKDYGVYESLEEVEHQARINGARPQGLHPFHC
VSVVAGLNDCNARQAIDGHRFLSGEAPAIPLKGCNAETCHCHYQHFEDRRVPHSDRRARYGLTEELYGHFGEKNKRQLPK
GRRITDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19334; Mature: 19334

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVFLLLLALALSVGWFVYSKYQSDHWHQRNRECRHKKRAVVPHELEIPKDYGVYESLEE
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
VEHQARINGARPQGLHPFHCVSVVAGLNDCNARQAIDGHRFLSGEAPAIPLKGCNAETCH
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCCHHH
CHYQHFEDRRVPHSDRRARYGLTEELYGHFGEKNKRQLPKGRRITDV
HHHHHHHHCCCCCCCCHHHCCCHHHHHHHCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MDVFLLLLALALSVGWFVYSKYQSDHWHQRNRECRHKKRAVVPHELEIPKDYGVYESLEE
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
VEHQARINGARPQGLHPFHCVSVVAGLNDCNARQAIDGHRFLSGEAPAIPLKGCNAETCH
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCCCCHHH
CHYQHFEDRRVPHSDRRARYGLTEELYGHFGEKNKRQLPKGRRITDV
HHHHHHHHCCCCCCCCHHHCCCHHHHHHHCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA