| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is deaD [H]
Identifier: 119773652
GI number: 119773652
Start: 628459
End: 630372
Strand: Reverse
Name: deaD [H]
Synonym: Sama_0512
Alternate gene names: 119773652
Gene position: 630372-628459 (Counterclockwise)
Preceding gene: 119773653
Following gene: 119773650
Centisome position: 14.64
GC content: 57.78
Gene sequence:
>1914_bases ATGTCATCCAATGAAAAGACTTTCCGCGAACTCGGTCTGACTGAGTCTGTTTTGCGTGCCCTCGACGAGCTGGGTTATGA AACCCCTACGCCCATCCAGGCCGCCAGTATCCAACCTCTGATGTCCGGCCAGGACATCCTGGGTCAGGCACAAACAGGTA CGGGTAAAACCGGTGCCTTTGCACTGCCACTGCTTTGCAGCGTCGATGCCAACCTCAATGCACCACAAATTCTGGTGCTG GCCCCTACCCGCGAACTCGCGGTACAGGTCGCCGAAGCCTTCACCAGCTATGCCAAACACATGAAGGGTTTCCACGTACT GCCTATCTACGGTGGCCAGAGCATGTATCAGCAGCTCCAGGCCCTGCGCCGTGGTCCACAGGTAGTTGTGGGCACACCAG GCCGTGTTATGGACCACATGCGTCGTGGCACCCTGAAGCTCGACACCTTGAAGGCTCTGGTACTCGACGAAGCCGATGAA ATGCTGAAAATGGGCTTCATCGACGATATCGAGTGGATCCTCGAGCACACTCCAGAGAGCCGCCAGCTGGCCCTGTTCTC GGCCACCATGCCTGAGCAGATCAAGCGCGTTGCCAACAAGCACCTGCGCAATCCAGTGAACATCAGCATCGCCGCCAGCC ACACCACAGTGGAATCCATCGAGCAACGTTTTGTGCAGGTGTCCCAGCACAATAAACTCGAGGCACTGGTACGGGTACTG GAAGTGGAAAACACTGAAGGTATCATCATCTTCGTGCGTACCCGTAACTCCTGTATGGAACTGGCCGAAAAGCTGGAAGC CCGTGGCTATGCCGCATCGCCACTGCACGGCGATATGAACCAGCAGGCCCGTGAGCGCGCCGTTGATCAACTGAAATCCG GCAAGCTGGATATTCTGATCGCCACCGATGTGGCCGCCCGTGGTCTGGACGTTGAGCGTATCGGCCACGTAGTAAACTAC GATATTCCTTACGATACAGAAGCTTACGTGCACCGTATCGGCCGTACCGGCCGCGCGGGTCGTACCGGTATGGCAATTCT GTTTGTGACCAGCCGTGAAATGCGCATGCTTCGCACCATCGAGCGCGCCACCAACAGCCGTATCTCTCCAATGAAGATCC CAAGCCCAGAGTCTGTGGCCGAGCGTCGTCTGTCTCGCTTGGGTGAGCAGGTTGCCGACATCCTCGCCAACGAGCATCTG GACTTTATGAAAGGCGCCGTGGCTCAGCTGTGTCAGCAGCTGGAAGTGGATACCGAGCAACTGGCCGCGGCCCTGTTGCA TCAGGTGCAGTTGGAGCGTCCATTGCAGCTGCCTGCCATGCACGAGCGTCAGCGTGACAACTTCGACGAGCGCACCGGCC GTGGCCAGAACGATCGCGCCGAACGTGGTGACCGTAACGAGCGTCGCCGTGACTCACGTCCTCTGCCAGGCAATTTCGGC AGTGCCGATACCCTCAAGGACAACCCGGACATCAGCATGAAGCGTTATCTCATCGATGTGGGTCGTGACCATAACGTGGG TGTGGGTAACATCGTGGGCGCCATCGCCAACGAAGCCAACATCGACAGCCGCTACATCGGCCAGATCCAGCTGTACGATG CAGTAACCACTGTTGACCTGCCAGACGGCATGCCAAAAGAAGTACTGCAGCACCTGAAAAAAGTGCGCGTATGTGGCAAG CCACTGAACATCCGTGAAGTAAGCACCGATGGCAGCGATGAAATCCCGGTAAGCAACGGGCCAATCCCCAAGCGCACACG TAAGCCATCCGGCGATCGTCCTGAGCGCGGAGAGCGTAAGTTCAACGATCGTGGCGGTGACCGTGGTGACCGCGGTGGCG ACCGCAAATTTAGCGAGCGCAAGAGCTTCGACAAGAAGCCAGCTGGCAAGCCACGCCGTCCAAAGGAAGACTGA
Upstream 100 bases:
>100_bases GGCGTTTTCGGATTCGGAACGGGAAATCGACACGGGGTTGGTTTTCTGGTCTGTCTAGTGAATCATCAAGCGCAATCACG CGCACCCTAAGGCGTTATCC
Downstream 100 bases:
>100_bases TCCCTGTTAAGAAAAGCCACCCCTGAGGTGGCTTTTTTATTTCAGCAAAACAACTTAGGGCGTCACAACATTAAACCAGA AGTTGAAATTATCCAGCATA
Product: ATP-dependent RNA helicase DeaD
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD [H]
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MSSNEKTFRELGLTESVLRALDELGYETPTPIQAASIQPLMSGQDILGQAQTGTGKTGAFALPLLCSVDANLNAPQILVL APTRELAVQVAEAFTSYAKHMKGFHVLPIYGGQSMYQQLQALRRGPQVVVGTPGRVMDHMRRGTLKLDTLKALVLDEADE MLKMGFIDDIEWILEHTPESRQLALFSATMPEQIKRVANKHLRNPVNISIAASHTTVESIEQRFVQVSQHNKLEALVRVL EVENTEGIIIFVRTRNSCMELAEKLEARGYAASPLHGDMNQQARERAVDQLKSGKLDILIATDVAARGLDVERIGHVVNY DIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATNSRISPMKIPSPESVAERRLSRLGEQVADILANEHL DFMKGAVAQLCQQLEVDTEQLAAALLHQVQLERPLQLPAMHERQRDNFDERTGRGQNDRAERGDRNERRRDSRPLPGNFG SADTLKDNPDISMKRYLIDVGRDHNVGVGNIVGAIANEANIDSRYIGQIQLYDAVTTVDLPDGMPKEVLQHLKKVRVCGK PLNIREVSTDGSDEIPVSNGPIPKRTRKPSGDRPERGERKFNDRGGDRGDRGGDRKFSERKSFDKKPAGKPRRPKED
Sequences:
>Translated_637_residues MSSNEKTFRELGLTESVLRALDELGYETPTPIQAASIQPLMSGQDILGQAQTGTGKTGAFALPLLCSVDANLNAPQILVL APTRELAVQVAEAFTSYAKHMKGFHVLPIYGGQSMYQQLQALRRGPQVVVGTPGRVMDHMRRGTLKLDTLKALVLDEADE MLKMGFIDDIEWILEHTPESRQLALFSATMPEQIKRVANKHLRNPVNISIAASHTTVESIEQRFVQVSQHNKLEALVRVL EVENTEGIIIFVRTRNSCMELAEKLEARGYAASPLHGDMNQQARERAVDQLKSGKLDILIATDVAARGLDVERIGHVVNY DIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATNSRISPMKIPSPESVAERRLSRLGEQVADILANEHL DFMKGAVAQLCQQLEVDTEQLAAALLHQVQLERPLQLPAMHERQRDNFDERTGRGQNDRAERGDRNERRRDSRPLPGNFG SADTLKDNPDISMKRYLIDVGRDHNVGVGNIVGAIANEANIDSRYIGQIQLYDAVTTVDLPDGMPKEVLQHLKKVRVCGK PLNIREVSTDGSDEIPVSNGPIPKRTRKPSGDRPERGERKFNDRGGDRGDRGGDRKFSERKSFDKKPAGKPRRPKED >Mature_636_residues SSNEKTFRELGLTESVLRALDELGYETPTPIQAASIQPLMSGQDILGQAQTGTGKTGAFALPLLCSVDANLNAPQILVLA PTRELAVQVAEAFTSYAKHMKGFHVLPIYGGQSMYQQLQALRRGPQVVVGTPGRVMDHMRRGTLKLDTLKALVLDEADEM LKMGFIDDIEWILEHTPESRQLALFSATMPEQIKRVANKHLRNPVNISIAASHTTVESIEQRFVQVSQHNKLEALVRVLE VENTEGIIIFVRTRNSCMELAEKLEARGYAASPLHGDMNQQARERAVDQLKSGKLDILIATDVAARGLDVERIGHVVNYD IPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATNSRISPMKIPSPESVAERRLSRLGEQVADILANEHLD FMKGAVAQLCQQLEVDTEQLAAALLHQVQLERPLQLPAMHERQRDNFDERTGRGQNDRAERGDRNERRRDSRPLPGNFGS ADTLKDNPDISMKRYLIDVGRDHNVGVGNIVGAIANEANIDSRYIGQIQLYDAVTTVDLPDGMPKEVLQHLKKVRVCGKP LNIREVSTDGSDEIPVSNGPIPKRTRKPSGDRPERGERKFNDRGGDRGDRGGDRKFSERKSFDKKPAGKPRRPKED
Specific function: Has a helix-destabilizing activity. Plays a key role in optimal cell growth at low temperature and is required for normal cell division [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=376, Percent_Identity=38.8297872340425, Blast_Score=280, Evalue=3e-75, Organism=Homo sapiens, GI20149629, Length=367, Percent_Identity=40.0544959128065, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI41327771, Length=407, Percent_Identity=37.3464373464373, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI4503529, Length=377, Percent_Identity=40.3183023872679, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI83700235, Length=376, Percent_Identity=40.6914893617021, Blast_Score=261, Evalue=2e-69, Organism=Homo sapiens, GI164664518, Length=374, Percent_Identity=35.0267379679144, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI301171467, Length=380, Percent_Identity=38.1578947368421, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI301171475, Length=380, Percent_Identity=38.1578947368421, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI87196351, Length=380, Percent_Identity=38.1578947368421, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI169881239, Length=380, Percent_Identity=38.1578947368421, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI13514809, Length=380, Percent_Identity=38.1578947368421, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI222352149, Length=362, Percent_Identity=37.5690607734807, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=37.5661375661376, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI50659095, Length=387, Percent_Identity=36.4341085271318, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI4758138, Length=375, Percent_Identity=37.3333333333333, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=35.9173126614987, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=36.1344537815126, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=36, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI148613856, Length=377, Percent_Identity=36.604774535809, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI38201710, Length=377, Percent_Identity=36.604774535809, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI216548263, Length=360, Percent_Identity=36.9444444444444, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI13518015, Length=360, Percent_Identity=36.9444444444444, Blast_Score=236, Evalue=7e-62, Organism=Homo sapiens, GI262231852, Length=360, Percent_Identity=36.9444444444444, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI262118318, Length=360, Percent_Identity=36.9444444444444, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI45446747, Length=375, Percent_Identity=34.6666666666667, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI45446743, Length=375, Percent_Identity=34.6666666666667, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=34.2776203966006, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI41327776, Length=367, Percent_Identity=36.2397820163488, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI41327773, Length=367, Percent_Identity=34.8773841961853, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=33.4277620396601, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=33.4277620396601, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI55749865, Length=364, Percent_Identity=34.0659340659341, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI51094101, Length=393, Percent_Identity=31.5521628498728, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI164419743, Length=393, Percent_Identity=31.5521628498728, Blast_Score=214, Evalue=3e-55, Organism=Homo sapiens, GI256223453, Length=384, Percent_Identity=32.03125, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI188035877, Length=375, Percent_Identity=33.0666666666667, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI41327779, Length=363, Percent_Identity=33.8842975206612, Blast_Score=202, Evalue=1e-51, Organism=Homo sapiens, GI6005743, Length=382, Percent_Identity=33.7696335078534, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI8922886, Length=382, Percent_Identity=33.5078534031414, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI38327634, Length=368, Percent_Identity=33.4239130434783, Blast_Score=196, Evalue=8e-50, Organism=Homo sapiens, GI13514831, Length=373, Percent_Identity=32.4396782841823, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI62241022, Length=364, Percent_Identity=33.7912087912088, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI38569505, Length=385, Percent_Identity=30.9090909090909, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI38569503, Length=385, Percent_Identity=30.9090909090909, Blast_Score=186, Evalue=8e-47, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=33.810888252149, Blast_Score=182, Evalue=9e-46, Organism=Homo sapiens, GI164419732, Length=379, Percent_Identity=33.245382585752, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI9506931, Length=393, Percent_Identity=31.2977099236641, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI17505907, Length=418, Percent_Identity=30.3827751196172, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI256773275, Length=405, Percent_Identity=31.358024691358, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI4826686, Length=346, Percent_Identity=28.3236994219653, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI9966805, Length=380, Percent_Identity=29.2105263157895, Blast_Score=140, Evalue=5e-33, Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=28.0871670702179, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=36.405529953917, Blast_Score=120, Evalue=5e-27, Organism=Escherichia coli, GI87082221, Length=569, Percent_Identity=52.1968365553603, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=43.236074270557, Blast_Score=296, Evalue=3e-81, Organism=Escherichia coli, GI1787605, Length=363, Percent_Identity=41.0468319559229, Blast_Score=288, Evalue=6e-79, Organism=Escherichia coli, GI1790214, Length=385, Percent_Identity=37.4025974025974, Blast_Score=248, Evalue=1e-66, Organism=Escherichia coli, GI1788930, Length=395, Percent_Identity=37.7215189873418, Blast_Score=216, Evalue=5e-57, Organism=Escherichia coli, GI48994977, Length=355, Percent_Identity=22.5352112676056, Blast_Score=72, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71987143, Length=377, Percent_Identity=39.7877984084881, Blast_Score=290, Evalue=2e-78, Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=38.2513661202186, Blast_Score=275, Evalue=4e-74, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=37.9781420765027, Blast_Score=274, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17555296, Length=374, Percent_Identity=38.5026737967914, Blast_Score=271, Evalue=6e-73, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=37.7308707124011, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17510307, Length=375, Percent_Identity=37.3333333333333, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17510309, Length=375, Percent_Identity=37.3333333333333, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71995514, Length=375, Percent_Identity=37.3333333333333, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=38.655462184874, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=37.2340425531915, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17510559, Length=447, Percent_Identity=33.1096196868009, Blast_Score=243, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=38.4823848238482, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI17552114, Length=382, Percent_Identity=34.5549738219895, Blast_Score=241, Evalue=8e-64, Organism=Caenorhabditis elegans, GI115532548, Length=386, Percent_Identity=35.7512953367876, Blast_Score=232, Evalue=6e-61, Organism=Caenorhabditis elegans, GI17552642, Length=361, Percent_Identity=37.9501385041551, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=37.7464788732394, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=35.7142857142857, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=35.0383631713555, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=32.2033898305085, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=35.0383631713555, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=36.0215053763441, Blast_Score=223, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17536103, Length=392, Percent_Identity=35.4591836734694, Blast_Score=223, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507945, Length=373, Percent_Identity=35.3887399463807, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=34.375, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=34.4086021505376, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71999644, Length=354, Percent_Identity=30.7909604519774, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71999646, Length=354, Percent_Identity=30.7909604519774, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17509811, Length=390, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=32.2674418604651, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17505370, Length=385, Percent_Identity=32.2077922077922, Blast_Score=188, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17553716, Length=370, Percent_Identity=31.0810810810811, Blast_Score=188, Evalue=9e-48, Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=31.6622691292876, Blast_Score=184, Evalue=9e-47, Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=33.4277620396601, Blast_Score=174, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17556951, Length=403, Percent_Identity=28.5359801488834, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17508543, Length=389, Percent_Identity=26.4781491002571, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=25.9708737864078, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17507641, Length=437, Percent_Identity=27.9176201372998, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI32564046, Length=424, Percent_Identity=27.5943396226415, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI25148291, Length=360, Percent_Identity=28.3333333333333, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI71982862, Length=212, Percent_Identity=33.0188679245283, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71987152, Length=112, Percent_Identity=45.5357142857143, Blast_Score=108, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71997889, Length=391, Percent_Identity=25.0639386189258, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=23.7388724035608, Blast_Score=104, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321856, Length=365, Percent_Identity=40, Blast_Score=269, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=36.4116094986807, Blast_Score=266, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=40.650406504065, Blast_Score=262, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=40.650406504065, Blast_Score=262, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6324217, Length=380, Percent_Identity=37.8947368421053, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6325138, Length=377, Percent_Identity=38.1962864721485, Blast_Score=252, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6323021, Length=367, Percent_Identity=37.874659400545, Blast_Score=250, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6324778, Length=357, Percent_Identity=38.655462184874, Blast_Score=243, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6320041, Length=383, Percent_Identity=34.7258485639687, Blast_Score=235, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=37.5, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6324620, Length=368, Percent_Identity=35.5978260869565, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6323947, Length=405, Percent_Identity=32.8395061728395, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=376, Percent_Identity=36.7021276595745, Blast_Score=214, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=31.6239316239316, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320173, Length=424, Percent_Identity=29.4811320754717, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=32.010582010582, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=359, Percent_Identity=33.7047353760446, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=355, Percent_Identity=33.8028169014084, Blast_Score=190, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=383, Percent_Identity=30.5483028720627, Blast_Score=188, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320400, Length=419, Percent_Identity=28.4009546539379, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=31.8059299191375, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=429, Percent_Identity=27.7389277389277, Blast_Score=154, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=27.6699029126214, Blast_Score=153, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=427, Percent_Identity=26.6978922716628, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=363, Percent_Identity=24.7933884297521, Blast_Score=110, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=409, Percent_Identity=22.9828850855746, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24645031, Length=377, Percent_Identity=38.9920424403183, Blast_Score=281, Evalue=1e-75, Organism=Drosophila melanogaster, GI24585582, Length=375, Percent_Identity=38.1333333333333, Blast_Score=273, Evalue=3e-73, Organism=Drosophila melanogaster, GI24584399, Length=363, Percent_Identity=38.8429752066116, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=39.2, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=39.2, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=39.2, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=39.2, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24584994, Length=407, Percent_Identity=35.8722358722359, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI21355075, Length=367, Percent_Identity=36.5122615803815, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24642151, Length=372, Percent_Identity=36.5591397849462, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI28574962, Length=377, Percent_Identity=38.4615384615385, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI21356161, Length=414, Percent_Identity=34.7826086956522, Blast_Score=241, Evalue=2e-63, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=36.9747899159664, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=38.0434782608696, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=37.3333333333333, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24583279, Length=395, Percent_Identity=32.9113924050633, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI24583281, Length=395, Percent_Identity=32.9113924050633, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=35.8090185676393, Blast_Score=232, Evalue=7e-61, Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=35.8090185676393, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=35.8090185676393, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=35.8090185676393, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=35.8090185676393, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=35.8090185676393, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=35.8090185676393, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI17136814, Length=373, Percent_Identity=36.9973190348526, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI24581954, Length=384, Percent_Identity=32.8125, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24581952, Length=384, Percent_Identity=32.8125, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24581956, Length=384, Percent_Identity=32.8125, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI18857967, Length=372, Percent_Identity=36.5591397849462, Blast_Score=226, Evalue=5e-59, Organism=Drosophila melanogaster, GI28575014, Length=397, Percent_Identity=31.2342569269521, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI28571808, Length=378, Percent_Identity=31.4814814814815, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI28571809, Length=378, Percent_Identity=31.4814814814815, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=37.0607028753994, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI17647335, Length=379, Percent_Identity=30.6068601583113, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=33.7912087912088, Blast_Score=176, Evalue=6e-44, Organism=Drosophila melanogaster, GI24642822, Length=416, Percent_Identity=30.5288461538462, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI24643725, Length=397, Percent_Identity=28.7153652392947, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24666101, Length=346, Percent_Identity=32.3699421965318, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=30.6060606060606, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI20130173, Length=334, Percent_Identity=28.7425149700599, Blast_Score=144, Evalue=3e-34, Organism=Drosophila melanogaster, GI19920478, Length=363, Percent_Identity=28.099173553719, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI24640164, Length=370, Percent_Identity=26.2162162162162, Blast_Score=116, Evalue=5e-26, Organism=Drosophila melanogaster, GI28571338, Length=219, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI18859659, Length=219, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI17136666, Length=398, Percent_Identity=25.1256281407035, Blast_Score=106, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021046 - InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF12343 DEADboxA; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 71031; Mature: 70900
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNEKTFRELGLTESVLRALDELGYETPTPIQAASIQPLMSGQDILGQAQTGTGKTGAF CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCHHHCCHHHHCCCCCCCCCCCCC ALPLLCSVDANLNAPQILVLAPTRELAVQVAEAFTSYAKHMKGFHVLPIYGGQSMYQQLQ HHHHHEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH ALRRGPQVVVGTPGRVMDHMRRGTLKLDTLKALVLDEADEMLKMGFIDDIEWILEHTPES HHHCCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC RQLALFSATMPEQIKRVANKHLRNPVNISIAASHTTVESIEQRFVQVSQHNKLEALVRVL CEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHH EVENTEGIIIFVRTRNSCMELAEKLEARGYAASPLHGDMNQQARERAVDQLKSGKLDILI HCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE ATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTI ECCHHHCCCCHHHHCHHEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH ERATNSRISPMKIPSPESVAERRLSRLGEQVADILANEHLDFMKGAVAQLCQQLEVDTEQ HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH LAAALLHQVQLERPLQLPAMHERQRDNFDERTGRGQNDRAERGDRNERRRDSRPLPGNFG HHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCCCCCCHHHCCCCHHHHHCCCCCCCCCC SADTLKDNPDISMKRYLIDVGRDHNVGVGNIVGAIANEANIDSRYIGQIQLYDAVTTVDL CCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHCCEEEEEEEEEEEEC PDGMPKEVLQHLKKVRVCGKPLNIREVSTDGSDEIPVSNGPIPKRTRKPSGDRPERGERK CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH FNDRGGDRGDRGGDRKFSERKSFDKKPAGKPRRPKED HCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SSNEKTFRELGLTESVLRALDELGYETPTPIQAASIQPLMSGQDILGQAQTGTGKTGAF CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCHHHCCHHHHCCCCCCCCCCCCC ALPLLCSVDANLNAPQILVLAPTRELAVQVAEAFTSYAKHMKGFHVLPIYGGQSMYQQLQ HHHHHEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH ALRRGPQVVVGTPGRVMDHMRRGTLKLDTLKALVLDEADEMLKMGFIDDIEWILEHTPES HHHCCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC RQLALFSATMPEQIKRVANKHLRNPVNISIAASHTTVESIEQRFVQVSQHNKLEALVRVL CEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHH EVENTEGIIIFVRTRNSCMELAEKLEARGYAASPLHGDMNQQARERAVDQLKSGKLDILI HCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE ATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTI ECCHHHCCCCHHHHCHHEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH ERATNSRISPMKIPSPESVAERRLSRLGEQVADILANEHLDFMKGAVAQLCQQLEVDTEQ HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH LAAALLHQVQLERPLQLPAMHERQRDNFDERTGRGQNDRAERGDRNERRRDSRPLPGNFG HHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCCCCCCHHHCCCCHHHHHCCCCCCCCCC SADTLKDNPDISMKRYLIDVGRDHNVGVGNIVGAIANEANIDSRYIGQIQLYDAVTTVDL CCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHCCEEEEEEEEEEEEC PDGMPKEVLQHLKKVRVCGKPLNIREVSTDGSDEIPVSNGPIPKRTRKPSGDRPERGERK CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH FNDRGGDRGDRGGDRKFSERKSFDKKPAGKPRRPKED HCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8056751 [H]