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The map label for this gene is 119773564

Identifier: 119773564

GI number: 119773564

Start: 520976

End: 521746

Strand: Reverse

Name: 119773564

Synonym: Sama_0424

Alternate gene names: NA

Gene position: 521746-520976 (Counterclockwise)

Preceding gene: 119773565

Following gene: 119773562

Centisome position: 12.12

GC content: 56.68

Gene sequence:

>771_bases
ATGCACCATTCCTTCAGGCTTTTGCTGCTGCTCCTGACTGTGTTGCCCGGTATCACTGCGCCCCTGGCCCAAGAAAAACT
GAATTCATTGTCATTTCTGACCGAAGAGTACCCCCCGTTTAACTTCACCCGCGATGGCAAGGTGCAGGGGATCGCCGTGG
ACTTGCTGCTAAGCGCGGCCGCCCTTGAGGGGCAAAGCATCAGCCACGAATCCATCCGCGTGTATCCCTGGACCCGGGCT
TACGCCATGGCGCTGCGTGGCCATAACATGGTGCTGTTTTCCACCACCCGCACTGCGGAGCGGGAGTCACTGTTTCATTG
GGTCGGCCCCATAGCCCCCATGCGGATAGTCTTGATAGCTCCCAGGCAGCGGCATATCCGCATTAACTCGTTGGCAGACT
TAAAAGATAAGCGCATTGGTGTGGTCACCAACGACATTGGGGAAGAAGTGCTGGCCCAACTTGGCCTGGCGGACCAACTT
CAATCCAATGCCAGCGCCGACTTGCTGCTGAAGATGATGGCCCGTGGACGTATCGATCTTTGGGCCTACGAAGAAACCGT
CGCCAAATGGCTCATCAAAGAGTCGGGGATGAGCTTTGATGACTTTGAGGTGGTGTATCTGCTCAGAGATGCCGAGCTCT
ACTATGCCTTCAGCCGCGACGTGCCCGAAGCATTGCGGGTGCAACTGCAGCACGCCCTGGATACGCTCAAAACACCTCTG
GCAGACGCAACCAGCGGCTGGGCAACCATTACCCAAAAGTACCTGCAGTGA

Upstream 100 bases:

>100_bases
GCACGAAAGCAAGACGCAAAATCCCGGCCTTTGCCGGGATTTTTTACGCCCGAGTTCGAGAGAACTACACTCAAAGAATC
CAGGCAATGAGGGCGTCTCT

Downstream 100 bases:

>100_bases
AAACGTCCCCCGGTTAAAGCTCCGGCCACAGACGTTTACGCTCATCAGTGTAATGCCACCAGGGCTTGGGTTCTTCCCCC
TCACTGAAGGCCACCAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter; Amino Acid ABC Transporter; PAS/PAC Sensor Hybrid Histidine Kinase; ABC Amino Acid Transporter Periplasmic Protein; Cache Sensor Protein

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MHHSFRLLLLLLTVLPGITAPLAQEKLNSLSFLTEEYPPFNFTRDGKVQGIAVDLLLSAAALEGQSISHESIRVYPWTRA
YAMALRGHNMVLFSTTRTAERESLFHWVGPIAPMRIVLIAPRQRHIRINSLADLKDKRIGVVTNDIGEEVLAQLGLADQL
QSNASADLLLKMMARGRIDLWAYEETVAKWLIKESGMSFDDFEVVYLLRDAELYYAFSRDVPEALRVQLQHALDTLKTPL
ADATSGWATITQKYLQ

Sequences:

>Translated_256_residues
MHHSFRLLLLLLTVLPGITAPLAQEKLNSLSFLTEEYPPFNFTRDGKVQGIAVDLLLSAAALEGQSISHESIRVYPWTRA
YAMALRGHNMVLFSTTRTAERESLFHWVGPIAPMRIVLIAPRQRHIRINSLADLKDKRIGVVTNDIGEEVLAQLGLADQL
QSNASADLLLKMMARGRIDLWAYEETVAKWLIKESGMSFDDFEVVYLLRDAELYYAFSRDVPEALRVQLQHALDTLKTPL
ADATSGWATITQKYLQ
>Mature_256_residues
MHHSFRLLLLLLTVLPGITAPLAQEKLNSLSFLTEEYPPFNFTRDGKVQGIAVDLLLSAAALEGQSISHESIRVYPWTRA
YAMALRGHNMVLFSTTRTAERESLFHWVGPIAPMRIVLIAPRQRHIRINSLADLKDKRIGVVTNDIGEEVLAQLGLADQL
QSNASADLLLKMMARGRIDLWAYEETVAKWLIKESGMSFDDFEVVYLLRDAELYYAFSRDVPEALRVQLQHALDTLKTPL
ADATSGWATITQKYLQ

Specific function: Unknown

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28878; Mature: 28878

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHSFRLLLLLLTVLPGITAPLAQEKLNSLSFLTEEYPPFNFTRDGKVQGIAVDLLLSAA
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ALEGQSISHESIRVYPWTRAYAMALRGHNMVLFSTTRTAERESLFHWVGPIAPMRIVLIA
HHCCCCCCCCCEEEEECHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEC
PRQRHIRINSLADLKDKRIGVVTNDIGEEVLAQLGLADQLQSNASADLLLKMMARGRIDL
CCCCEEEECCHHCCCCCCEEEEEHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCEE
WAYEETVAKWLIKESGMSFDDFEVVYLLRDAELYYAFSRDVPEALRVQLQHALDTLKTPL
EHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
ADATSGWATITQKYLQ
CCCCCHHHHHHHHHCC
>Mature Secondary Structure
MHHSFRLLLLLLTVLPGITAPLAQEKLNSLSFLTEEYPPFNFTRDGKVQGIAVDLLLSAA
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ALEGQSISHESIRVYPWTRAYAMALRGHNMVLFSTTRTAERESLFHWVGPIAPMRIVLIA
HHCCCCCCCCCEEEEECHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEC
PRQRHIRINSLADLKDKRIGVVTNDIGEEVLAQLGLADQLQSNASADLLLKMMARGRIDL
CCCCEEEECCHHCCCCCCEEEEEHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCEE
WAYEETVAKWLIKESGMSFDDFEVVYLLRDAELYYAFSRDVPEALRVQLQHALDTLKTPL
EHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
ADATSGWATITQKYLQ
CCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA