Definition | Nocardioides sp. JS614 chromosome, complete genome. |
---|---|
Accession | NC_008699 |
Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is mgtA [H]
Identifier: 119717460
GI number: 119717460
Start: 3438898
End: 3440079
Strand: Reverse
Name: mgtA [H]
Synonym: Noca_3236
Alternate gene names: 119717460
Gene position: 3440079-3438898 (Counterclockwise)
Preceding gene: 119717461
Following gene: 119717456
Centisome position: 69.0
GC content: 73.94
Gene sequence:
>1182_bases ATGCGACTGCGCCGGCACCACACCGAACCCCACGAGCTCCCGACTGCTCCGACCGACCGGCTCCGCGTGCTCGTCGTCGC CGAGTCGTTCCTGCCCCAGGTCAACGGGGTCACCAACTCGGTGCGCCGCGTCCTCGACCACCTTGCTGCCGAGGGGCACC CGGCCGAGCTGGTGGCGCCGACGGGGCCGGCGACGTACGCCGGCTTCCCCGTCACCCGGGCGCGCGGCGCGAGCCTGCCG TTCTACCGCGACTTCCGGATCGGGCTGGAGACACGGGCCCGGCTCCGGGCGGTGATGGTGCGGTTCCGTCCCGACGTCGT GCACGTCGCCTCGCCGGCCACGCTCGGCCACCAGGCCGTGCGTGCCGCCGAGGAGCTCGGCATCCCGACGGTTGCGATCT ACCAGACCGACCTGGTCGGCTTCGCCGAGCGCTACGACATCGCCGGCGGCCAGCGGGCGATGGCCTACCTGACCCGCCGG ATCCACCAGGGCGTCGACCGCACGCTCGCCCCCTCGTCGACCAGCCTGCGCCAGCTCGCCGACCTCGGGATCCACGCGAC GGCGCTGTGGCCCCGTGGCGTGGACCTCCAGCAGTTCCACCCTGTCCACCGCTCTGTAGAGCTGCGCCAGCAGCTCGCAC CCGAGGGGCGGCTGCTGATCGGGTACGTCGGCAGGCTGGCCGCCGAGAAGGAGCTCGACCTGCTCACGTGTCTCGCGGGT GACGCGCGCTACCGACTGGTCATCGTCGGCGGAGGGCCTGAGGCGCCGCGGCTGCGCTCGCTGCTCCCCGACGCGAGGTT CCTCGGCGTCCTGCACGGTGACGACCTGAGCCGCGCCTACGCGTCGCTCGACATGTTCGTGCACACCGGTCGCCACGAGA CCTACTGCCAGTCCGCTCAAGAGGCGCTGGCCTCCGGGGTGCCGGTGGTGGCGCCGCGGGCCGGTGGCCCGGTCGACGTG GTCGCCGACGGCGTGGCCGGCTTCCTCTACGAGCCCGGCAGCCGCGCGGAGCTGAGGTCGTACGTCGACGCTCTCGCCTC GGACCGGCTGTTTCGTCGCCGGATGGGGCTCGCGGCGCGCCGCAGCGTGGCCGGCCGGTCCTGGGACGGCGTCAACGACG CGCTGGTCCACCACTACCGCGACGTGATCGCGGCGCGCGCCACCCACCGCCGCGCCGCGTGA
Upstream 100 bases:
>100_bases CCGCCACCATTCACGTGGCGTTCGCGTCGGCATCGGCGCGCGTTCCGCGCCGGTCGGCAGGGTCCGAGACGGATGGACAC CGTCTCCCGAAGGACGCACC
Downstream 100 bases:
>100_bases TCCGGGGGTGACGGCCGCCCGGGCTACCGCAGGAAGCGCGGGGCCCGCACCAACAGCTCGGTATTGCGCGAGGACGGCTT GCCGTGCCGCTGGTTGTCTC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MRLRRHHTEPHELPTAPTDRLRVLVVAESFLPQVNGVTNSVRRVLDHLAAEGHPAELVAPTGPATYAGFPVTRARGASLP FYRDFRIGLETRARLRAVMVRFRPDVVHVASPATLGHQAVRAAEELGIPTVAIYQTDLVGFAERYDIAGGQRAMAYLTRR IHQGVDRTLAPSSTSLRQLADLGIHATALWPRGVDLQQFHPVHRSVELRQQLAPEGRLLIGYVGRLAAEKELDLLTCLAG DARYRLVIVGGGPEAPRLRSLLPDARFLGVLHGDDLSRAYASLDMFVHTGRHETYCQSAQEALASGVPVVAPRAGGPVDV VADGVAGFLYEPGSRAELRSYVDALASDRLFRRRMGLAARRSVAGRSWDGVNDALVHHYRDVIAARATHRRAA
Sequences:
>Translated_393_residues MRLRRHHTEPHELPTAPTDRLRVLVVAESFLPQVNGVTNSVRRVLDHLAAEGHPAELVAPTGPATYAGFPVTRARGASLP FYRDFRIGLETRARLRAVMVRFRPDVVHVASPATLGHQAVRAAEELGIPTVAIYQTDLVGFAERYDIAGGQRAMAYLTRR IHQGVDRTLAPSSTSLRQLADLGIHATALWPRGVDLQQFHPVHRSVELRQQLAPEGRLLIGYVGRLAAEKELDLLTCLAG DARYRLVIVGGGPEAPRLRSLLPDARFLGVLHGDDLSRAYASLDMFVHTGRHETYCQSAQEALASGVPVVAPRAGGPVDV VADGVAGFLYEPGSRAELRSYVDALASDRLFRRRMGLAARRSVAGRSWDGVNDALVHHYRDVIAARATHRRAA >Mature_393_residues MRLRRHHTEPHELPTAPTDRLRVLVVAESFLPQVNGVTNSVRRVLDHLAAEGHPAELVAPTGPATYAGFPVTRARGASLP FYRDFRIGLETRARLRAVMVRFRPDVVHVASPATLGHQAVRAAEELGIPTVAIYQTDLVGFAERYDIAGGQRAMAYLTRR IHQGVDRTLAPSSTSLRQLADLGIHATALWPRGVDLQQFHPVHRSVELRQQLAPEGRLLIGYVGRLAAEKELDLLTCLAG DARYRLVIVGGGPEAPRLRSLLPDARFLGVLHGDDLSRAYASLDMFVHTGRHETYCQSAQEALASGVPVVAPRAGGPVDV VADGVAGFLYEPGSRAELRSYVDALASDRLFRRRMGLAARRSVAGRSWDGVNDALVHHYRDVIAARATHRRAA
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 43000; Mature: 43000
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRRHHTEPHELPTAPTDRLRVLVVAESFLPQVNGVTNSVRRVLDHLAAEGHPAELVAP CCCCCCCCCCCCCCCCCHHHEEEEEEEHHHCCHHCCHHHHHHHHHHHHHCCCCCCEEEEC TGPATYAGFPVTRARGASLPFYRDFRIGLETRARLRAVMVRFRPDVVHVASPATLGHQAV CCCCCCCCCCCHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH RAAEELGIPTVAIYQTDLVGFAERYDIAGGQRAMAYLTRRIHQGVDRTLAPSSTSLRQLA HHHHHHCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH DLGIHATALWPRGVDLQQFHPVHRSVELRQQLAPEGRLLIGYVGRLAAEKELDLLTCLAG HCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEECC DARYRLVIVGGGPEAPRLRSLLPDARFLGVLHGDDLSRAYASLDMFVHTGRHETYCQSAQ CCEEEEEEEECCCCCHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH EALASGVPVVAPRAGGPVDVVADGVAGFLYEPGSRAELRSYVDALASDRLFRRRMGLAAR HHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSVAGRSWDGVNDALVHHYRDVIAARATHRRAA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLRRHHTEPHELPTAPTDRLRVLVVAESFLPQVNGVTNSVRRVLDHLAAEGHPAELVAP CCCCCCCCCCCCCCCCCHHHEEEEEEEHHHCCHHCCHHHHHHHHHHHHHCCCCCCEEEEC TGPATYAGFPVTRARGASLPFYRDFRIGLETRARLRAVMVRFRPDVVHVASPATLGHQAV CCCCCCCCCCCHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH RAAEELGIPTVAIYQTDLVGFAERYDIAGGQRAMAYLTRRIHQGVDRTLAPSSTSLRQLA HHHHHHCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH DLGIHATALWPRGVDLQQFHPVHRSVELRQQLAPEGRLLIGYVGRLAAEKELDLLTCLAG HCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEECC DARYRLVIVGGGPEAPRLRSLLPDARFLGVLHGDDLSRAYASLDMFVHTGRHETYCQSAQ CCEEEEEEEECCCCCHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH EALASGVPVVAPRAGGPVDVVADGVAGFLYEPGSRAELRSYVDALASDRLFRRRMGLAAR HHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSVAGRSWDGVNDALVHHYRDVIAARATHRRAA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]