Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717424
Identifier: 119717424
GI number: 119717424
Start: 3398729
End: 3399871
Strand: Reverse
Name: 119717424
Synonym: Noca_3200
Alternate gene names: NA
Gene position: 3399871-3398729 (Counterclockwise)
Preceding gene: 119717425
Following gene: 119717423
Centisome position: 68.19
GC content: 72.0
Gene sequence:
>1143_bases ATGAGCGCGAGGCGATGGCTGGTCCCCGTCGGGCTGCTCGCCCTCGGGCTGGCGCTGCCGCCCGCGGGCGCCGCGCTGCC GGACCGGGCCCCGACCGGGGCACCGACGCGGACGCCGGCCACGGCTGCCTACGTCCCGCCGATCCGGCACGTCTTCGTGA TCAACATCGAGAACAAGGGCTACGACCGGACCTGGGGCGCCGGGTCCGCAGCGCCGTACCTCGCCACGACGCTGCGCCGC AAGGGCGTCCTGCTCGACAAGTACTACGGCACCGCGCACAACTCCCAGCCCAACTACGTCGCGCAGATCTCGGGGCAGGG GCCGAACCCCGACATGCAGGCGGACTGCCAGACCTACTCGACGTTCGTCCGGGTGACCACGGTCGAGCCGGACCAGGCGG TCGGGTCCGGGTGCGTGTTCCCCGCCGACGTCCCGACGCTGCCGGGCCAGCTCACGGACCAGGGGCTGACCTGGCGCGGC TACATGGACGACATGGAACGGCCCTGCCAGCACCCCGAGCGGGACGCCCCGGACCCGACCCAGCGGGCGACGGCGGAGCA CAACTACGCCGCGCGGCACAACCCGTTCGTCTACTTCCGCTCGATCACCGACCATCCGGCGTACTGCAAGGCGCACGTGG TGCGGCTCGGTCGGCTCACCGACGACCTGGCACGCCTCCGCACCACGCCGAACCTCGTCTACATCACCCCCGACCTGTGC AACGACGGCCACGACGCGCCGTGTGCCGACGGCCGGCCCGGCGGGCTGCGCAGCGTCAACGCGTGGATGAGGAAGTGGGT GCCGCGGATCCTGCAGTCCCCGGCGTTCCGCAGGAACGGCGTGCTGGTGATCACCGCCGACGAGTCCGACGGGCCGCAGA CCGACGCCACCGCCTGCTGCGGGCCCGCGACCTCCGCGAACAGCCCGATGCCCGGCATCTTCGGGCCCGGCGGGGGGAAG ATCGGCGCGCTCGTGCTCTCCAGGTACGTCGAACCGGGCACCTGGAGCACCACGCCGTACAACCACTACTCCCTGCTCGG CTCGATCGAGGAGATCTTCGGGCTGCCCAAGCTCGGCTACGCCCGGGACCCCGGCGTCGACACGTTCGGCCTCGACGTCT ACAACTCCGGCTGGGAGCAGTAG
Upstream 100 bases:
>100_bases CGGACATCGCGCCGGTGGGCTGCGCGCCCGACGAGACCAAGTCCGCGGACTGGGCGGCCCTTAAGCACTTGGCGCGCGAC CTCGGCTGGAGGCTTCCCCG
Downstream 100 bases:
>100_bases TCCCCGGACTGTCCTAGGGTGTCGCCCATGCTGCGGACCGCGTTGCTCACGGTGCTCGACCCCGGCAACCCGCCGGCGTG GTGCTTCCGGACGAACGCCG
Product: phosphoesterase
Products: NA
Alternate protein names: Secreted Acid Phosphatase; Phosphoesterase Family Protein
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSARRWLVPVGLLALGLALPPAGAALPDRAPTGAPTRTPATAAYVPPIRHVFVINIENKGYDRTWGAGSAAPYLATTLRR KGVLLDKYYGTAHNSQPNYVAQISGQGPNPDMQADCQTYSTFVRVTTVEPDQAVGSGCVFPADVPTLPGQLTDQGLTWRG YMDDMERPCQHPERDAPDPTQRATAEHNYAARHNPFVYFRSITDHPAYCKAHVVRLGRLTDDLARLRTTPNLVYITPDLC NDGHDAPCADGRPGGLRSVNAWMRKWVPRILQSPAFRRNGVLVITADESDGPQTDATACCGPATSANSPMPGIFGPGGGK IGALVLSRYVEPGTWSTTPYNHYSLLGSIEEIFGLPKLGYARDPGVDTFGLDVYNSGWEQ
Sequences:
>Translated_380_residues MSARRWLVPVGLLALGLALPPAGAALPDRAPTGAPTRTPATAAYVPPIRHVFVINIENKGYDRTWGAGSAAPYLATTLRR KGVLLDKYYGTAHNSQPNYVAQISGQGPNPDMQADCQTYSTFVRVTTVEPDQAVGSGCVFPADVPTLPGQLTDQGLTWRG YMDDMERPCQHPERDAPDPTQRATAEHNYAARHNPFVYFRSITDHPAYCKAHVVRLGRLTDDLARLRTTPNLVYITPDLC NDGHDAPCADGRPGGLRSVNAWMRKWVPRILQSPAFRRNGVLVITADESDGPQTDATACCGPATSANSPMPGIFGPGGGK IGALVLSRYVEPGTWSTTPYNHYSLLGSIEEIFGLPKLGYARDPGVDTFGLDVYNSGWEQ >Mature_379_residues SARRWLVPVGLLALGLALPPAGAALPDRAPTGAPTRTPATAAYVPPIRHVFVINIENKGYDRTWGAGSAAPYLATTLRRK GVLLDKYYGTAHNSQPNYVAQISGQGPNPDMQADCQTYSTFVRVTTVEPDQAVGSGCVFPADVPTLPGQLTDQGLTWRGY MDDMERPCQHPERDAPDPTQRATAEHNYAARHNPFVYFRSITDHPAYCKAHVVRLGRLTDDLARLRTTPNLVYITPDLCN DGHDAPCADGRPGGLRSVNAWMRKWVPRILQSPAFRRNGVLVITADESDGPQTDATACCGPATSANSPMPGIFGPGGGKI GALVLSRYVEPGTWSTTPYNHYSLLGSIEEIFGLPKLGYARDPGVDTFGLDVYNSGWEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41131; Mature: 40999
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARRWLVPVGLLALGLALPPAGAALPDRAPTGAPTRTPATAAYVPPIRHVFVINIENKG CCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCC YDRTWGAGSAAPYLATTLRRKGVLLDKYYGTAHNSQPNYVAQISGQGPNPDMQADCQTYS CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHEEE TFVRVTTVEPDQAVGSGCVFPADVPTLPGQLTDQGLTWRGYMDDMERPCQHPERDAPDPT EEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCHH QRATAEHNYAARHNPFVYFRSITDHPAYCKAHVVRLGRLTDDLARLRTTPNLVYITPDLC HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHC NDGHDAPCADGRPGGLRSVNAWMRKWVPRILQSPAFRRNGVLVITADESDGPQTDATACC CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCC GPATSANSPMPGIFGPGGGKIGALVLSRYVEPGTWSTTPYNHYSLLGSIEEIFGLPKLGY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC ARDPGVDTFGLDVYNSGWEQ CCCCCCCEEECCCCCCCCCC >Mature Secondary Structure SARRWLVPVGLLALGLALPPAGAALPDRAPTGAPTRTPATAAYVPPIRHVFVINIENKG CCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCC YDRTWGAGSAAPYLATTLRRKGVLLDKYYGTAHNSQPNYVAQISGQGPNPDMQADCQTYS CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHEEE TFVRVTTVEPDQAVGSGCVFPADVPTLPGQLTDQGLTWRGYMDDMERPCQHPERDAPDPT EEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCHH QRATAEHNYAARHNPFVYFRSITDHPAYCKAHVVRLGRLTDDLARLRTTPNLVYITPDLC HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHC NDGHDAPCADGRPGGLRSVNAWMRKWVPRILQSPAFRRNGVLVITADESDGPQTDATACC CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCC GPATSANSPMPGIFGPGGGKIGALVLSRYVEPGTWSTTPYNHYSLLGSIEEIFGLPKLGY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC ARDPGVDTFGLDVYNSGWEQ CCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA