Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717423
Identifier: 119717423
GI number: 119717423
Start: 3398192
End: 3398701
Strand: Reverse
Name: 119717423
Synonym: Noca_3199
Alternate gene names: NA
Gene position: 3398701-3398192 (Counterclockwise)
Preceding gene: 119717424
Following gene: 119717422
Centisome position: 68.17
GC content: 72.55
Gene sequence:
>510_bases ATGCTGCGGACCGCGTTGCTCACGGTGCTCGACCCCGGCAACCCGCCGGCGTGGTGCTTCCGGACGAACGCCGAGGGTGA GCTGCCGACCTGCACCTACGTCAACGGCAGCTGGCACCGCAGCTACGAGGACGGCGGGCTCGGCTCCGGCGGCGACGGCA TCGGGGGCGCGATGGTCGCGCTGTTCGTGATCGGCCTGGTGGTCAGCGGGCTCGTGCTGGCCTGGAAGATCTCCACCGCC CGCAAGATGGCGCGTGAGGCCGGCATGAACGAGGACGATGCCACGATCATGACCGTGCTCACCGACGACGGCTTCGAGGC GACGTACCTCGCGGCCAACCTGCGCCAGCCTCCCGCCCGGCCTGGCGCGCAACCTCCCACCCAGCCGCCGACGCCGGCCG TGCCGCCGGCGGGCGAGCGGCTGCGCGAGCTGGACCGGCTCCTCGAGGAGGGGCTGATCACCCAGGCCGAGCGGGACGAG CGACGTCGCGCCGTCATCGACGGGATCTGA
Upstream 100 bases:
>100_bases GCTCGGCTACGCCCGGGACCCCGGCGTCGACACGTTCGGCCTCGACGTCTACAACTCCGGCTGGGAGCAGTAGTCCCCGG ACTGTCCTAGGGTGTCGCCC
Downstream 100 bases:
>100_bases CGGGTCGCCGGCCCGATCACGACGTAGGCTTCGGCCGTGCTCACGACCCGCCACGGCGTCCGTCCGCTCGGGCCGGCCGA CCTCGACGCGTTCCTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLRTALLTVLDPGNPPAWCFRTNAEGELPTCTYVNGSWHRSYEDGGLGSGGDGIGGAMVALFVIGLVVSGLVLAWKISTA RKMAREAGMNEDDATIMTVLTDDGFEATYLAANLRQPPARPGAQPPTQPPTPAVPPAGERLRELDRLLEEGLITQAERDE RRRAVIDGI
Sequences:
>Translated_169_residues MLRTALLTVLDPGNPPAWCFRTNAEGELPTCTYVNGSWHRSYEDGGLGSGGDGIGGAMVALFVIGLVVSGLVLAWKISTA RKMAREAGMNEDDATIMTVLTDDGFEATYLAANLRQPPARPGAQPPTQPPTPAVPPAGERLRELDRLLEEGLITQAERDE RRRAVIDGI >Mature_169_residues MLRTALLTVLDPGNPPAWCFRTNAEGELPTCTYVNGSWHRSYEDGGLGSGGDGIGGAMVALFVIGLVVSGLVLAWKISTA RKMAREAGMNEDDATIMTVLTDDGFEATYLAANLRQPPARPGAQPPTQPPTPAVPPAGERLRELDRLLEEGLITQAERDE RRRAVIDGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18098; Mature: 18098
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTALLTVLDPGNPPAWCFRTNAEGELPTCTYVNGSWHRSYEDGGLGSGGDGIGGAMVA CCCHHEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH LFVIGLVVSGLVLAWKISTARKMAREAGMNEDDATIMTVLTDDGFEATYLAANLRQPPAR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHEECCCCCCCCC PGAQPPTQPPTPAVPPAGERLRELDRLLEEGLITQAERDERRRAVIDGI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLRTALLTVLDPGNPPAWCFRTNAEGELPTCTYVNGSWHRSYEDGGLGSGGDGIGGAMVA CCCHHEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH LFVIGLVVSGLVLAWKISTARKMAREAGMNEDDATIMTVLTDDGFEATYLAANLRQPPAR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHEECCCCCCCCC PGAQPPTQPPTPAVPPAGERLRELDRLLEEGLITQAERDERRRAVIDGI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA