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The map label for this gene is 119717362

Identifier: 119717362

GI number: 119717362

Start: 3340739

End: 3341947

Strand: Reverse

Name: 119717362

Synonym: Noca_3138

Alternate gene names: NA

Gene position: 3341947-3340739 (Counterclockwise)

Preceding gene: 119717363

Following gene: 119717357

Centisome position: 67.03

GC content: 69.89

Gene sequence:

>1209_bases
ATGTCCCAGAGTCGTCCGCGCTCGGGCGCGGCCGCAGCCCTCGCGCTCACCGCTGCGCTGACGCTCTCGGCCTGCCGGTC
CGACGACCTCCCCGGCGCCTCGGCGCTCGCGGGGGACGGCCCCAGCGCATCGGCGTCGGCCGAGGTGCCCGCTCTGCGGC
TGGTGACGAGCGTCCAGAAGGGTGCCACCGATGTCGCGGTCGATCGAGAGCTCGCGGTCGAGGCCAGGGGCGGCTCGATC
GACTCCGTGTCGGTGTCCTCGCCCGCTGGCAAGGTTCCCGGGCAGGTCCGGGCCGACGGCACCCGCTGGGTGGCGAGCGG
GCGGCTCGAGCCGGGCACGTCGTACACCATGACGACGGTCGCCGCGAAGACCGACGGCACCCGGGTCAGTCGCACCACCA
GGTTCCGCACCCAGGACCTCACGCTCGACGAGCAGACCTACCCCTCCGTGGCGCCGCTCGCCGGCGAGACGGTCGGTGTC
GGCATGCCGGTGATCGTCAGCTTCGACCTCCCCGTCAGCGACAAGGCGTCGTTCGAGAAGCACATGCAGGTCACGTCCGC
GCCCAGCCAGCCGGGTGCCTGGCACTGGATCAGCGACACCGAGGCTCACTGGCGACCCAAGGCGTACTGGAAGGCCGGCA
CCGACGTCCACGTCGACATCGACGTCAACAGCGTGTCTGCCGGACACGGGATCTACGGCCAGGAGAGTCGCGAGCTCGAC
TTCCACGTCGGGGACGCCCACATCTACCGGGTCGACGCGCAGACGCACCAGCTCAAGGTGTTCAGCAACGGCAAGCTCCT
GCGCACGCTGCCGACCACCACCGGGAAGCCGGGCTTCACCACCCGCTCCGGGGTCAAGGTGATCATCGAGAAGTTCCCCG
TCAAGCGGATGAACTCCGAGACCATCGGCATCCCCGCCGGCAGCTCCGAGGCCTACGACATCGACGATGTCCAGTGGGCG
ATGCGGGTGACCTACTCCGGGGAGTTCATCCACGCCGCACCCTGGTCGGTCGGCTCGCAGGGCTACGCCAACGTCTCGCA
CGGCTGCACCGGGCTGAGCACCGCCAACGCCGCCTGGCTCTACGCCATGTCGCGCCGTGGCGACGTCGTCGAGTACACCG
GCACCGACAAGCCGATGACGCTGACCAACGGCTACGGCGACTGGAACGAGTCCTTCCAGCAGTACCGCCAGGGCTCCGCC
CTCAGCTGA

Upstream 100 bases:

>100_bases
CGCACGCCCACTGACCGCTGCGCGCCGAATCGGTGCGGTGGGGACCGGCGGTTAGGCTGGTTGTCGGACCACACGCACGC
TCGTCACGGGGAGTTCCAGC

Downstream 100 bases:

>100_bases
CCCGGGGCGGCCGGGCGCGGTGCGGGCGCGGGCCGGGCGGGGGCGGTGAGCCGACGAGAACGAAGCAGCCCCGGTCCGGT
CGTGGTGACCGTGGCCGGGG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSQSRPRSGAAAALALTAALTLSACRSDDLPGASALAGDGPSASASAEVPALRLVTSVQKGATDVAVDRELAVEARGGSI
DSVSVSSPAGKVPGQVRADGTRWVASGRLEPGTSYTMTTVAAKTDGTRVSRTTRFRTQDLTLDEQTYPSVAPLAGETVGV
GMPVIVSFDLPVSDKASFEKHMQVTSAPSQPGAWHWISDTEAHWRPKAYWKAGTDVHVDIDVNSVSAGHGIYGQESRELD
FHVGDAHIYRVDAQTHQLKVFSNGKLLRTLPTTTGKPGFTTRSGVKVIIEKFPVKRMNSETIGIPAGSSEAYDIDDVQWA
MRVTYSGEFIHAAPWSVGSQGYANVSHGCTGLSTANAAWLYAMSRRGDVVEYTGTDKPMTLTNGYGDWNESFQQYRQGSA
LS

Sequences:

>Translated_402_residues
MSQSRPRSGAAAALALTAALTLSACRSDDLPGASALAGDGPSASASAEVPALRLVTSVQKGATDVAVDRELAVEARGGSI
DSVSVSSPAGKVPGQVRADGTRWVASGRLEPGTSYTMTTVAAKTDGTRVSRTTRFRTQDLTLDEQTYPSVAPLAGETVGV
GMPVIVSFDLPVSDKASFEKHMQVTSAPSQPGAWHWISDTEAHWRPKAYWKAGTDVHVDIDVNSVSAGHGIYGQESRELD
FHVGDAHIYRVDAQTHQLKVFSNGKLLRTLPTTTGKPGFTTRSGVKVIIEKFPVKRMNSETIGIPAGSSEAYDIDDVQWA
MRVTYSGEFIHAAPWSVGSQGYANVSHGCTGLSTANAAWLYAMSRRGDVVEYTGTDKPMTLTNGYGDWNESFQQYRQGSA
LS
>Mature_401_residues
SQSRPRSGAAAALALTAALTLSACRSDDLPGASALAGDGPSASASAEVPALRLVTSVQKGATDVAVDRELAVEARGGSID
SVSVSSPAGKVPGQVRADGTRWVASGRLEPGTSYTMTTVAAKTDGTRVSRTTRFRTQDLTLDEQTYPSVAPLAGETVGVG
MPVIVSFDLPVSDKASFEKHMQVTSAPSQPGAWHWISDTEAHWRPKAYWKAGTDVHVDIDVNSVSAGHGIYGQESRELDF
HVGDAHIYRVDAQTHQLKVFSNGKLLRTLPTTTGKPGFTTRSGVKVIIEKFPVKRMNSETIGIPAGSSEAYDIDDVQWAM
RVTYSGEFIHAAPWSVGSQGYANVSHGCTGLSTANAAWLYAMSRRGDVVEYTGTDKPMTLTNGYGDWNESFQQYRQGSAL
S

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 42760; Mature: 42629

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSRPRSGAAAALALTAALTLSACRSDDLPGASALAGDGPSASASAEVPALRLVTSVQK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
GATDVAVDRELAVEARGGSIDSVSVSSPAGKVPGQVRADGTRWVASGRLEPGTSYTMTTV
CCCCEEECCEEEEEECCCCCCEEEECCCCCCCCCEEECCCEEEEECCCCCCCCCEEEEEE
AAKTDGTRVSRTTRFRTQDLTLDEQTYPSVAPLAGETVGVGMPVIVSFDLPVSDKASFEK
EECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCHHHHH
HMQVTSAPSQPGAWHWISDTEAHWRPKAYWKAGTDVHVDIDVNSVSAGHGIYGQESRELD
HHEEECCCCCCCCEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEE
FHVGDAHIYRVDAQTHQLKVFSNGKLLRTLPTTTGKPGFTTRSGVKVIIEKFPVKRMNSE
EEECCEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCHHEEEECCCCHHCCCC
TIGIPAGSSEAYDIDDVQWAMRVTYSGEFIHAAPWSVGSQGYANVSHGCTGLSTANAAWL
EEECCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
YAMSRRGDVVEYTGTDKPMTLTNGYGDWNESFQQYRQGSALS
EEECCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SQSRPRSGAAAALALTAALTLSACRSDDLPGASALAGDGPSASASAEVPALRLVTSVQK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
GATDVAVDRELAVEARGGSIDSVSVSSPAGKVPGQVRADGTRWVASGRLEPGTSYTMTTV
CCCCEEECCEEEEEECCCCCCEEEECCCCCCCCCEEECCCEEEEECCCCCCCCCEEEEEE
AAKTDGTRVSRTTRFRTQDLTLDEQTYPSVAPLAGETVGVGMPVIVSFDLPVSDKASFEK
EECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCHHHHH
HMQVTSAPSQPGAWHWISDTEAHWRPKAYWKAGTDVHVDIDVNSVSAGHGIYGQESRELD
HHEEECCCCCCCCEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEE
FHVGDAHIYRVDAQTHQLKVFSNGKLLRTLPTTTGKPGFTTRSGVKVIIEKFPVKRMNSE
EEECCEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCHHEEEECCCCHHCCCC
TIGIPAGSSEAYDIDDVQWAMRVTYSGEFIHAAPWSVGSQGYANVSHGCTGLSTANAAWL
EEECCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
YAMSRRGDVVEYTGTDKPMTLTNGYGDWNESFQQYRQGSALS
EEECCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]