Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717356
Identifier: 119717356
GI number: 119717356
Start: 3334744
End: 3335163
Strand: Reverse
Name: 119717356
Synonym: Noca_3132
Alternate gene names: NA
Gene position: 3335163-3334744 (Counterclockwise)
Preceding gene: 119717357
Following gene: 119717355
Centisome position: 66.89
GC content: 71.9
Gene sequence:
>420_bases GTGACCGACTCGACCTCTCAGCGGACCGCCCTGCGGGTGCTGGTCTACAGCGACGACGTGAACACCCGGCAGCAGGTCAT CGTGGCGCTGGGCCGCCGCCCGCACCCCGACCTGCCCGAGGTCGAGTACGTCGAGGTGGCGACCGAGCCGGTCGTGATCT CGAACCTCGACGCCGGTGGCATCGACCTGGCGATCCTCGACGGCGAAGCGGTGCCCGCCGGCGGCATGGGCATCGCCAAG CAGCTCAAGGACGAGATCTACCAGTGCCCGCCGATCGTGGTCCTGACCGGCCGGCCCCAGGACGCCTGGCTCGCGACCTG GTCGCGCGCCGAGGCCGCCGTACCCCACCCGCTGGACCCGATCCAGCTGGCCGAGACGGTGGTGTCGCTGCTCCGCTCGC ACGTGCCCGCGAGCACGTGA
Upstream 100 bases:
>100_bases AAGCGCGAGGACCGGCGCCTGGACCTGCTCGAGGCACGGGAGCGGGCCGCTTCGGGGGACGCCCAGTCGCCAGCGGACGC GCCCTAGTAACATCGCGGGC
Downstream 100 bases:
>100_bases GCACCTGGCCGGAGGTCCTCGGCGCGCTCGTCGCCGGCTCGGACCTCAGCGCCGATCAGACTGCGTGGGCGATGGGGGAG ATCCTCTCGGGAGAGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTDSTSQRTALRVLVYSDDVNTRQQVIVALGRRPHPDLPEVEYVEVATEPVVISNLDAGGIDLAILDGEAVPAGGMGIAK QLKDEIYQCPPIVVLTGRPQDAWLATWSRAEAAVPHPLDPIQLAETVVSLLRSHVPAST
Sequences:
>Translated_139_residues MTDSTSQRTALRVLVYSDDVNTRQQVIVALGRRPHPDLPEVEYVEVATEPVVISNLDAGGIDLAILDGEAVPAGGMGIAK QLKDEIYQCPPIVVLTGRPQDAWLATWSRAEAAVPHPLDPIQLAETVVSLLRSHVPAST >Mature_138_residues TDSTSQRTALRVLVYSDDVNTRQQVIVALGRRPHPDLPEVEYVEVATEPVVISNLDAGGIDLAILDGEAVPAGGMGIAKQ LKDEIYQCPPIVVLTGRPQDAWLATWSRAEAAVPHPLDPIQLAETVVSLLRSHVPAST
Specific function: Unknown
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14941; Mature: 14810
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSTSQRTALRVLVYSDDVNTRQQVIVALGRRPHPDLPEVEYVEVATEPVVISNLDAGG CCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCC IDLAILDGEAVPAGGMGIAKQLKDEIYQCPPIVVLTGRPQDAWLATWSRAEAAVPHPLDP EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHEECCCCCCCCCCCCCH IQLAETVVSLLRSHVPAST HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDSTSQRTALRVLVYSDDVNTRQQVIVALGRRPHPDLPEVEYVEVATEPVVISNLDAGG CCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCC IDLAILDGEAVPAGGMGIAKQLKDEIYQCPPIVVLTGRPQDAWLATWSRAEAAVPHPLDP EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHEECCCCCCCCCCCCCH IQLAETVVSLLRSHVPAST HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]