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The map label for this gene is yfnA [H]

Identifier: 119717321

GI number: 119717321

Start: 3299279

End: 3300787

Strand: Reverse

Name: yfnA [H]

Synonym: Noca_3097

Alternate gene names: 119717321

Gene position: 3300787-3299279 (Counterclockwise)

Preceding gene: 119717322

Following gene: 119717320

Centisome position: 66.2

GC content: 69.52

Gene sequence:

>1509_bases
GTGCGGTGGGGGAACGATCCAGGAGATCCGACCCCGACCGAGGAGAGCCCGATGAGCACCCGCGCCGCGGAGACCGTCGA
CGTCAACGGACCGACCCCCGACCTGAGGCGGGTGATGGGTCCGCGGTTGCTGCTCCTGTTCATCGTCGGCGACATCCTGG
GCGCCGGCATCTACGCCGTGACCGGTGAGATGGCGCTCGAGGTCGGCGGCGTCGTCTGGGTGCCGTTCCTCGTGGCGTTC
GCGGTCGCCACCCTCACGGCGTTCTCCTACCTCGAGCTGGTCACGAAGTACCCCCAGGCCGCCGGGGCCGCGCTCTACAC
CCACAAGGCCTTCGGCCTCCACTTCGTCACGTTCCTGGTGGCCTTCGCGGTCATCTGCTCGGGCATCACCAGCGCCTCGA
CGTCGTCGAACCTGTTGGCCACCAACCTGCTGGCCGGCCTCGACGGGCTCGGGTGGCAGCTGCCGCAGGGCGACACGGCG
ATCACCGTGGTGGCGATCGGGTTCATGCTGCTGCTCGCGGTCATCAACCTGCGCGGCGTGGGCGAGAGCGTGAAGTTCAA
CGTGTTCCTCACGCTGGTGGAGATGGCCGCGCTCGTCATCGTGATCGCCATCGGCTTCTGGGTGATGGCGCAGGGCGACG
CCGACCTGGGCCGGGTCGTCGTCTTCGACTCCGGGTCCGACCGCGGCCTGTTCCTCGCGGTCACGGTGGCCACCGCGATC
GCGTTCTTCGCGATGGTGGGCTTCGAGGACTCCGTGAACATGGTCGAGGAGACCAAGGACCCGATGCGGATCTTCCCGCG
GGTGATGCTGACCGGGCTCGGCATCGCCGTGGTCTTCTACATCCTGGTCGCGATCTCGGTCGTCGCGGTGATCCCCGAGG
GCGAGATCGAGTCGGTCGTCGCCGACGAGGGCAAGGTGCTGCTCAACGTGGTCGAGATGGGAGCGCCCGGGCTCCCGATC
GACAAGGTGTTCCCGTTCCTCACCGTGGTCGCGGTCGCGAACACGGCCCTGATCAACATGCTGATGGCCAGCCGGCTGCT
CTACGGCCTGGCCCGCCAGGACGTGCTCCCGCGCTCGCTCGGGCGAGTGCTCCCGGGTCGGCGCACGCCGTACGCCGGCA
TCCTCTTCTCCACGCTCCTCGCGCTCGCCCTGATCGTGGTCGTGACGTTCCTCGCCGAGACCGCGGTGATCTCGGCCCTG
GCCGGCACGACCGCGCTGCTGTTGCTGTGCGTGTTCGCGGTGGTCAACGTCGCCTGCCTGGTGCTGCGTCGCGACCCGGG
CCCCGAGGGCGGGTTCGCGGTGCCCGGCTGGATGCCGATGCTCGGCGCGGCCACCTGCTTGTACCTCGCCGGGCCGTGGG
CGCGCGACCGCGAGGACTGGGTCCAGTACCAGGTGGCCGGCGGGATGTTGGCGCTCGGCGTCGTGCTGTGGCTGGTCACC
TGGCTGACCAACCGCGGGATCCGCGGGAAGCGGACCGGGTTCCGCGACATCGAGCACCTCCAGGAGTGA

Upstream 100 bases:

>100_bases
TGCTGGCGGGCATCGGCCAGCCCACCGGGGAGCCGGTGGCGGCCGACCACTGACCCGGCCGGGCCACGACGCTCGGGAGA
CGCCGGGGGATTGAGGCCGG

Downstream 100 bases:

>100_bases
CCGTCGGGCGGCGGGGGCCGGTGTCTCGTCGGCGACCACCGAATCGGGCCGCGTGGGGGACCCGCCGTACCCTTGACCGG
TGAGCACGATCCCCGACCTC

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MRWGNDPGDPTPTEESPMSTRAAETVDVNGPTPDLRRVMGPRLLLLFIVGDILGAGIYAVTGEMALEVGGVVWVPFLVAF
AVATLTAFSYLELVTKYPQAAGAALYTHKAFGLHFVTFLVAFAVICSGITSASTSSNLLATNLLAGLDGLGWQLPQGDTA
ITVVAIGFMLLLAVINLRGVGESVKFNVFLTLVEMAALVIVIAIGFWVMAQGDADLGRVVVFDSGSDRGLFLAVTVATAI
AFFAMVGFEDSVNMVEETKDPMRIFPRVMLTGLGIAVVFYILVAISVVAVIPEGEIESVVADEGKVLLNVVEMGAPGLPI
DKVFPFLTVVAVANTALINMLMASRLLYGLARQDVLPRSLGRVLPGRRTPYAGILFSTLLALALIVVVTFLAETAVISAL
AGTTALLLLCVFAVVNVACLVLRRDPGPEGGFAVPGWMPMLGAATCLYLAGPWARDREDWVQYQVAGGMLALGVVLWLVT
WLTNRGIRGKRTGFRDIEHLQE

Sequences:

>Translated_502_residues
MRWGNDPGDPTPTEESPMSTRAAETVDVNGPTPDLRRVMGPRLLLLFIVGDILGAGIYAVTGEMALEVGGVVWVPFLVAF
AVATLTAFSYLELVTKYPQAAGAALYTHKAFGLHFVTFLVAFAVICSGITSASTSSNLLATNLLAGLDGLGWQLPQGDTA
ITVVAIGFMLLLAVINLRGVGESVKFNVFLTLVEMAALVIVIAIGFWVMAQGDADLGRVVVFDSGSDRGLFLAVTVATAI
AFFAMVGFEDSVNMVEETKDPMRIFPRVMLTGLGIAVVFYILVAISVVAVIPEGEIESVVADEGKVLLNVVEMGAPGLPI
DKVFPFLTVVAVANTALINMLMASRLLYGLARQDVLPRSLGRVLPGRRTPYAGILFSTLLALALIVVVTFLAETAVISAL
AGTTALLLLCVFAVVNVACLVLRRDPGPEGGFAVPGWMPMLGAATCLYLAGPWARDREDWVQYQVAGGMLALGVVLWLVT
WLTNRGIRGKRTGFRDIEHLQE
>Mature_502_residues
MRWGNDPGDPTPTEESPMSTRAAETVDVNGPTPDLRRVMGPRLLLLFIVGDILGAGIYAVTGEMALEVGGVVWVPFLVAF
AVATLTAFSYLELVTKYPQAAGAALYTHKAFGLHFVTFLVAFAVICSGITSASTSSNLLATNLLAGLDGLGWQLPQGDTA
ITVVAIGFMLLLAVINLRGVGESVKFNVFLTLVEMAALVIVIAIGFWVMAQGDADLGRVVVFDSGSDRGLFLAVTVATAI
AFFAMVGFEDSVNMVEETKDPMRIFPRVMLTGLGIAVVFYILVAISVVAVIPEGEIESVVADEGKVLLNVVEMGAPGLPI
DKVFPFLTVVAVANTALINMLMASRLLYGLARQDVLPRSLGRVLPGRRTPYAGILFSTLLALALIVVVTFLAETAVISAL
AGTTALLLLCVFAVVNVACLVLRRDPGPEGGFAVPGWMPMLGAATCLYLAGPWARDREDWVQYQVAGGMLALGVVLWLVT
WLTNRGIRGKRTGFRDIEHLQE

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI114326544, Length=407, Percent_Identity=24.0786240786241, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI114326550, Length=407, Percent_Identity=24.0786240786241, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI258645169, Length=430, Percent_Identity=24.6511627906977, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI110347453, Length=386, Percent_Identity=26.1658031088083, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87082250, Length=362, Percent_Identity=24.585635359116, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87081869, Length=311, Percent_Identity=25.7234726688103, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790653, Length=277, Percent_Identity=25.9927797833935, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786694, Length=384, Percent_Identity=22.9166666666667, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=424, Percent_Identity=25.4716981132075, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17531343, Length=445, Percent_Identity=24.2696629213483, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71995382, Length=374, Percent_Identity=22.9946524064171, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71995388, Length=374, Percent_Identity=22.9946524064171, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71993915, Length=377, Percent_Identity=23.8726790450928, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17533459, Length=442, Percent_Identity=25.1131221719457, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32566695, Length=381, Percent_Identity=25.1968503937008, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI32566699, Length=340, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193208714, Length=376, Percent_Identity=25.531914893617, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24667468, Length=412, Percent_Identity=25.7281553398058, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI221512776, Length=427, Percent_Identity=22.4824355971897, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24666159, Length=427, Percent_Identity=22.4824355971897, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357367, Length=467, Percent_Identity=22.4839400428266, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24668806, Length=431, Percent_Identity=23.8979118329466, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356285, Length=431, Percent_Identity=23.8979118329466, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24668802, Length=431, Percent_Identity=23.8979118329466, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161077963, Length=424, Percent_Identity=24.5283018867925, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 53388; Mature: 53388

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWGNDPGDPTPTEESPMSTRAAETVDVNGPTPDLRRVMGPRLLLLFIVGDILGAGIYAV
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TGEMALEVGGVVWVPFLVAFAVATLTAFSYLELVTKYPQAAGAALYTHKAFGLHFVTFLV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHH
AFAVICSGITSASTSSNLLATNLLAGLDGLGWQLPQGDTAITVVAIGFMLLLAVINLRGV
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GESVKFNVFLTLVEMAALVIVIAIGFWVMAQGDADLGRVVVFDSGSDRGLFLAVTVATAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEHHHHHHHHH
AFFAMVGFEDSVNMVEETKDPMRIFPRVMLTGLGIAVVFYILVAISVVAVIPEGEIESVV
HHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ADEGKVLLNVVEMGAPGLPIDKVFPFLTVVAVANTALINMLMASRLLYGLARQDVLPRSL
HCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
GRVLPGRRTPYAGILFSTLLALALIVVVTFLAETAVISALAGTTALLLLCVFAVVNVACL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRRDPGPEGGFAVPGWMPMLGAATCLYLAGPWARDREDWVQYQVAGGMLALGVVLWLVT
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH
WLTNRGIRGKRTGFRDIEHLQE
HHHCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MRWGNDPGDPTPTEESPMSTRAAETVDVNGPTPDLRRVMGPRLLLLFIVGDILGAGIYAV
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TGEMALEVGGVVWVPFLVAFAVATLTAFSYLELVTKYPQAAGAALYTHKAFGLHFVTFLV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHH
AFAVICSGITSASTSSNLLATNLLAGLDGLGWQLPQGDTAITVVAIGFMLLLAVINLRGV
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GESVKFNVFLTLVEMAALVIVIAIGFWVMAQGDADLGRVVVFDSGSDRGLFLAVTVATAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEHHHHHHHHH
AFFAMVGFEDSVNMVEETKDPMRIFPRVMLTGLGIAVVFYILVAISVVAVIPEGEIESVV
HHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ADEGKVLLNVVEMGAPGLPIDKVFPFLTVVAVANTALINMLMASRLLYGLARQDVLPRSL
HCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
GRVLPGRRTPYAGILFSTLLALALIVVVTFLAETAVISALAGTTALLLLCVFAVVNVACL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRRDPGPEGGFAVPGWMPMLGAATCLYLAGPWARDREDWVQYQVAGGMLALGVVLWLVT
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH
WLTNRGIRGKRTGFRDIEHLQE
HHHCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]