Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717229
Identifier: 119717229
GI number: 119717229
Start: 3201060
End: 3202076
Strand: Reverse
Name: 119717229
Synonym: Noca_3005
Alternate gene names: NA
Gene position: 3202076-3201060 (Counterclockwise)
Preceding gene: 119717230
Following gene: 119717228
Centisome position: 64.22
GC content: 71.78
Gene sequence:
>1017_bases ATGAAGAGGATCGGGTTCCTCTCCTTCGGGCACTGGACGCCGTCCCCGCAGTCCCAGGTGCGCACCGGCGCCGACGCGCT GCTGCAGTCGATCGACCTGGCAGTCGCGGCCGAGGAGGTCGGCGTCGACGGCGCGTACTTCCGGGTGCACCACTTCGCCC GCCAGCTCGCCTCGCCGTTCCCATTGCTCGCGGCCATCGGGGCCCGCACCAGCCGGATCGAGATCGGCACCGGCGTCATC GACATGCGCTACGAGAACCCCCTCTACATGGCGGAGGACGCCGGCGCCGCCGACCTGATCTCCGGCGGCCGGCTCCAGCT GGGCATCAGTCGCGGGTCACCGGAGCAGGTCGTCGACGGCTACCGCTACTTCGGCTACCAGCCTGCCGAGGGCTCCGACC ACGCCGCGATGGCGCGCGAGCACACCGCCGTGCTGCTGAAGGTGCTCGAGGGCGAGGGCTTCGCCGAGCCCAACCCGCGT CCGATGTTCCCGAACCCGCCCGGCCTGCTGCGGGTCGAGCCACACTCGCCGGGCCTGCGTGAGCGGATCTGGTGGGGTGC GGGGACGCGGGCGACCGCGGAGTGGACGGCCGGGCAGGGGATGAACCTGATGAGCTCGACCCTGCTCACCGAGGACACCG GGGTGCCGTTCCACCAGCTCCAGGCCGAGCAGATCCAGCGGTTCCGCGACGCCTGGACGGCCGCCGGCCACGATCGGGAG CCGCGGGTCTCGGTCAGCCGGAGCATCTTCCCGGTGGTCGACGACCTCGACCGCGCCTACTTCGGTGACCGGAGCGGCGA GGACCAGGTCGGTCAGCTCGAAGGCGGCCTGGCCCGGTTCGGGAAGACGTACGCCGGTGAACCCGACGCCCTCGTCGAGG AGCTCGCCCAGGACGAGGCGATCGCCGCGGCCGACACGCTGCTGCTCACGATCCCCAACCAGCTCGGCGTCGCCTACAAC GTGCACGTGCTCGAGAGCGTCCTCACCCACCTGGCTCCGGCGCTCGGGTGGCGCTGA
Upstream 100 bases:
>100_bases AGGTCCTGGTCCGCGAGCAGATGGGCGCCGCCGCGGACCTCGCCGTACCCCTCGACGTGAGCGTGGGCTTCGGCCGCAGC TGGCACGAGGCGGCCCACTG
Downstream 100 bases:
>100_bases GCCGCCCGGGACGGGTGCGTCCTTGACCGGGCACCGGTCCCCATCTAACGTACATATGGATAGGTTTTAGAGTCTCGTCG GAGCGTGACCATGGACTGGG
Product: luciferase family protein
Products: NA
Alternate protein names: Luciferase-Like Monooxygenase; Luciferase Family Protein; Luciferase-Like Subgroup; Luciferase-Like Protein; Flavin-Dependent Oxidoreductase; Oxidoreductase Protein; Alkanal Monooxygenase; Bacterial Luciferase; Luciferase; Alkanal Monooxygenase Alpha Chain; Luciferase-Like; LuxA-Related Protein; Luciferase-Like Monooxygenase Protein; Monooxigenase; Alkanal Monooxygenase-Like Protein; Alkanal Monooxygenase Like Protein; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKRIGFLSFGHWTPSPQSQVRTGADALLQSIDLAVAAEEVGVDGAYFRVHHFARQLASPFPLLAAIGARTSRIEIGTGVI DMRYENPLYMAEDAGAADLISGGRLQLGISRGSPEQVVDGYRYFGYQPAEGSDHAAMAREHTAVLLKVLEGEGFAEPNPR PMFPNPPGLLRVEPHSPGLRERIWWGAGTRATAEWTAGQGMNLMSSTLLTEDTGVPFHQLQAEQIQRFRDAWTAAGHDRE PRVSVSRSIFPVVDDLDRAYFGDRSGEDQVGQLEGGLARFGKTYAGEPDALVEELAQDEAIAAADTLLLTIPNQLGVAYN VHVLESVLTHLAPALGWR
Sequences:
>Translated_338_residues MKRIGFLSFGHWTPSPQSQVRTGADALLQSIDLAVAAEEVGVDGAYFRVHHFARQLASPFPLLAAIGARTSRIEIGTGVI DMRYENPLYMAEDAGAADLISGGRLQLGISRGSPEQVVDGYRYFGYQPAEGSDHAAMAREHTAVLLKVLEGEGFAEPNPR PMFPNPPGLLRVEPHSPGLRERIWWGAGTRATAEWTAGQGMNLMSSTLLTEDTGVPFHQLQAEQIQRFRDAWTAAGHDRE PRVSVSRSIFPVVDDLDRAYFGDRSGEDQVGQLEGGLARFGKTYAGEPDALVEELAQDEAIAAADTLLLTIPNQLGVAYN VHVLESVLTHLAPALGWR >Mature_338_residues MKRIGFLSFGHWTPSPQSQVRTGADALLQSIDLAVAAEEVGVDGAYFRVHHFARQLASPFPLLAAIGARTSRIEIGTGVI DMRYENPLYMAEDAGAADLISGGRLQLGISRGSPEQVVDGYRYFGYQPAEGSDHAAMAREHTAVLLKVLEGEGFAEPNPR PMFPNPPGLLRVEPHSPGLRERIWWGAGTRATAEWTAGQGMNLMSSTLLTEDTGVPFHQLQAEQIQRFRDAWTAAGHDRE PRVSVSRSIFPVVDDLDRAYFGDRSGEDQVGQLEGGLARFGKTYAGEPDALVEELAQDEAIAAADTLLLTIPNQLGVAYN VHVLESVLTHLAPALGWR
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36752; Mature: 36752
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIGFLSFGHWTPSPQSQVRTGADALLQSIDLAVAAEEVGVDGAYFRVHHFARQLASPF CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PLLAAIGARTSRIEIGTGVIDMRYENPLYMAEDAGAADLISGGRLQLGISRGSPEQVVDG HHHHHHCCCCCEEEECCCEEEEEECCCEEEECCCCCHHHHCCCEEEEEECCCCHHHHHHH YRYFGYQPAEGSDHAAMAREHTAVLLKVLEGEGFAEPNPRPMFPNPPGLLRVEPHSPGLR HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHH ERIWWGAGTRATAEWTAGQGMNLMSSTLLTEDTGVPFHQLQAEQIQRFRDAWTAAGHDRE HHEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC PRVSVSRSIFPVVDDLDRAYFGDRSGEDQVGQLEGGLARFGKTYAGEPDALVEELAQDEA CCCHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH IAAADTLLLTIPNQLGVAYNVHVLESVLTHLAPALGWR HHHHCEEEEECCHHHCCEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRIGFLSFGHWTPSPQSQVRTGADALLQSIDLAVAAEEVGVDGAYFRVHHFARQLASPF CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PLLAAIGARTSRIEIGTGVIDMRYENPLYMAEDAGAADLISGGRLQLGISRGSPEQVVDG HHHHHHCCCCCEEEECCCEEEEEECCCEEEECCCCCHHHHCCCEEEEEECCCCHHHHHHH YRYFGYQPAEGSDHAAMAREHTAVLLKVLEGEGFAEPNPRPMFPNPPGLLRVEPHSPGLR HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHH ERIWWGAGTRATAEWTAGQGMNLMSSTLLTEDTGVPFHQLQAEQIQRFRDAWTAAGHDRE HHEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC PRVSVSRSIFPVVDDLDRAYFGDRSGEDQVGQLEGGLARFGKTYAGEPDALVEELAQDEA CCCHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH IAAADTLLLTIPNQLGVAYNVHVLESVLTHLAPALGWR HHHHCEEEEECCHHHCCEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA