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The map label for this gene is glxA [H]

Identifier: 119717212

GI number: 119717212

Start: 3177792

End: 3178736

Strand: Reverse

Name: glxA [H]

Synonym: Noca_2988

Alternate gene names: 119717212

Gene position: 3178736-3177792 (Counterclockwise)

Preceding gene: 119717213

Following gene: 119717209

Centisome position: 63.75

GC content: 73.97

Gene sequence:

>945_bases
GTGCACAAGGTCGCGGTCGTGGTCCAGGACGGTGCGGAGCCCTTCGGGCTCGGCTCGTTGGTCGAGGTGTGGGGGGAGCC
GTACCACCCCGAGGACGACAACCCCGTGTTCGACTTCCGGGTCTGCACCCCCCGTCCGGGTCGGGTCCGCGGGCGCTCCG
ACTACGACCTGGTCGTGGAGCGCGGGCTCGAGGCCACCGAGGACGCCGACCTGGTCTGCCTGAGCCCGAAGTACGAGTTC
CTCCGGCACGACCCGGTCGTGCTGGACGCGGTGCGCGCGGCGTACGACCGCGGCGCGATCATCTACGCGCACTGCTCGGG
TGTCTTCGAGCTCGGCGCGGCCGGGCTGCTCGACGGGCGCGAGTGCACCACCCACTGGCGCTACACCGACAAGCTGGCCG
CGCTGTACCCGGCCGCGGACGTCCGTCCCGACGTCTTGTACTGCCACGACGGGAACGTCCTCACCGGTGCCGGTGCGGCG
GCCGGGATCGACGCCTCGCTGCACCTGGTGCGCGAGCAGTTCGGGGCGCGGACGGCGGCGGCGACCGCGCGGCGGATCGT
GGTGCCGCCGCACCGCGACGGCGGGCAGGCCCAGTTCATCGCCCGCGCCGTCCCCGACTGCGAGGCGGAGACCCTCGGCC
CGCTGCTGGAGTGGATCGTCGACAACCTCGGCGAGGACCTCGGCGTCGAGGCGCTGGCGCGCCGCAACCACATGTCGCCG
CGCACCTTCGCCCGGCGGTTCCGCGCCGAGACCGGCACCACCCCGCACTCCTGGGTGACCCGCCAGCGGGTGCAGGCGGC
CGAGGAGCTGCTCGAGCGCACCGACCACTCCATCGACTGGATCGCCGACGAGGTCGGCTTCGGCAACGCCGCGACGCTGC
GCCACCACTTCGGCCGGGTGCGCGGGCTCAGCCCGCAGCAGTACCGCCGGCGCTTCGCCGGCTAG

Upstream 100 bases:

>100_bases
GGGTCATGGCAGTAATCATGCGCCCACTTCTTTCCTGCCACGAGTGGCAGAAAAGACGCTGTGCATTGATTTCCTGCCAG
TTCTGCGCGAGGCTGGGCGG

Downstream 100 bases:

>100_bases
CCGCGTCTCGCGTGTCGCCCACGGGGTTGGTCGTCCGACGGTGTGGTTGCGGTCGGCGCTAGGCCCCGGGCCGCCTCTGG
GTCAGCTGGTCTCGCAGGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MHKVAVVVQDGAEPFGLGSLVEVWGEPYHPEDDNPVFDFRVCTPRPGRVRGRSDYDLVVERGLEATEDADLVCLSPKYEF
LRHDPVVLDAVRAAYDRGAIIYAHCSGVFELGAAGLLDGRECTTHWRYTDKLAALYPAADVRPDVLYCHDGNVLTGAGAA
AGIDASLHLVREQFGARTAAATARRIVVPPHRDGGQAQFIARAVPDCEAETLGPLLEWIVDNLGEDLGVEALARRNHMSP
RTFARRFRAETGTTPHSWVTRQRVQAAEELLERTDHSIDWIADEVGFGNAATLRHHFGRVRGLSPQQYRRRFAG

Sequences:

>Translated_314_residues
MHKVAVVVQDGAEPFGLGSLVEVWGEPYHPEDDNPVFDFRVCTPRPGRVRGRSDYDLVVERGLEATEDADLVCLSPKYEF
LRHDPVVLDAVRAAYDRGAIIYAHCSGVFELGAAGLLDGRECTTHWRYTDKLAALYPAADVRPDVLYCHDGNVLTGAGAA
AGIDASLHLVREQFGARTAAATARRIVVPPHRDGGQAQFIARAVPDCEAETLGPLLEWIVDNLGEDLGVEALARRNHMSP
RTFARRFRAETGTTPHSWVTRQRVQAAEELLERTDHSIDWIADEVGFGNAATLRHHFGRVRGLSPQQYRRRFAG
>Mature_314_residues
MHKVAVVVQDGAEPFGLGSLVEVWGEPYHPEDDNPVFDFRVCTPRPGRVRGRSDYDLVVERGLEATEDADLVCLSPKYEF
LRHDPVVLDAVRAAYDRGAIIYAHCSGVFELGAAGLLDGRECTTHWRYTDKLAALYPAADVRPDVLYCHDGNVLTGAGAA
AGIDASLHLVREQFGARTAAATARRIVVPPHRDGGQAQFIARAVPDCEAETLGPLLEWIVDNLGEDLGVEALARRNHMSP
RTFARRFRAETGTTPHSWVTRQRVQAAEELLERTDHSIDWIADEVGFGNAATLRHHFGRVRGLSPQQYRRRFAG

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786496, Length=100, Percent_Identity=34, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34713; Mature: 34713

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKVAVVVQDGAEPFGLGSLVEVWGEPYHPEDDNPVFDFRVCTPRPGRVRGRSDYDLVVE
CCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
RGLEATEDADLVCLSPKYEFLRHDPVVLDAVRAAYDRGAIIYAHCSGVFELGAAGLLDGR
CCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCC
ECTTHWRYTDKLAALYPAADVRPDVLYCHDGNVLTGAGAAAGIDASLHLVREQFGARTAA
HHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHCCHHHH
ATARRIVVPPHRDGGQAQFIARAVPDCEAETLGPLLEWIVDNLGEDLGVEALARRNHMSP
HHCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHCCHHHHHHHCCCCH
RTFARRFRAETGTTPHSWVTRQRVQAAEELLERTDHSIDWIADEVGFGNAATLRHHFGRV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH
RGLSPQQYRRRFAG
CCCCHHHHHHHHCC
>Mature Secondary Structure
MHKVAVVVQDGAEPFGLGSLVEVWGEPYHPEDDNPVFDFRVCTPRPGRVRGRSDYDLVVE
CCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
RGLEATEDADLVCLSPKYEFLRHDPVVLDAVRAAYDRGAIIYAHCSGVFELGAAGLLDGR
CCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCC
ECTTHWRYTDKLAALYPAADVRPDVLYCHDGNVLTGAGAAAGIDASLHLVREQFGARTAA
HHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHCCHHHH
ATARRIVVPPHRDGGQAQFIARAVPDCEAETLGPLLEWIVDNLGEDLGVEALARRNHMSP
HHCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHCCHHHHHHHCCCCH
RTFARRFRAETGTTPHSWVTRQRVQAAEELLERTDHSIDWIADEVGFGNAATLRHHFGRV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH
RGLSPQQYRRRFAG
CCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]