Click here to switch to the map view.

The map label for this gene is resD [H]

Identifier: 119717163

GI number: 119717163

Start: 3121200

End: 3121898

Strand: Reverse

Name: resD [H]

Synonym: Noca_2939

Alternate gene names: 119717163

Gene position: 3121898-3121200 (Counterclockwise)

Preceding gene: 119717164

Following gene: 119717162

Centisome position: 62.61

GC content: 71.82

Gene sequence:

>699_bases
ATGACGAGAATCCTCGTCGTGGACGACGAGCCACCGATCCGGACCGTGCTGCGCGGCTACCTCGAGGCGGAGGGCTTCGT
GGTGTCGGAGGCCGCGGACGGGGCCGCCGCGCTCGCCGAGCTGCGCGCCGGCTCGGCCGAGCCGGTCGACCTGGTGCTGC
TGGACGTGATGATGCCCGGCATGGACGGCCTGGAGGTCCTCCGCCGCCTGCGGACCGTCGCCGACACCTACGTCATCCTG
GTCACCGCGCGCAGCGAGGAGGTCGACAAGCTGGTCGGGCTCGGCGTCGGCGCGGACGACTATGTCACCAAGCCGTTCAG
CCCGCGTGAGGTCACCGCCCGGGTGAAGTCCGTGCTGCGTCGCCGACGCGACGGAACCACCGGCGACGATCCGCGCCTGC
GGTTCGACGAGCTGACCGTCGACCCGATCGGGCGGGAGATCACGGTGGACGGCGCGCCCGTGCGGCTGACGGCCCTCGAG
TTCGACCTCCTTCATGCCCTGGTGCGGGCCCCGGGCCGGGTGTTCTCGCGGGCGCAGCTGCTCGAGCAGGTGTGGGGCAA
CGACTTCTACGGCGACGAGCGGGTCGTCGACGTCCACATCCGCAATCTCCGGGCCGAGCTCGGCGACGACGCGACCGACC
CGCACCTCATCGCGACCGTGCGCGGCGTCGGCTACAAGTTCATCGGACGGCCCCGGTGA

Upstream 100 bases:

>100_bases
GGCCACATGGGCGGGATGATGGGCGGCGGAGCCCGCGGCTGGATGGGGGGCTTCGGGAGCTGATCCGCCACTGTGCCGCG
GGCGTCCGGGGAGGTGAGGG

Downstream 100 bases:

>100_bases
ACGTGCGACTGCCCTGGCGGCTGTTCGCCTCCTACGCGCTGGTCGCGGTCCTCGGCGCCACCGTGTCCTACCTGACCGTC
CGGCTGCTGGCCCCACGCCT

Product: response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTRILVVDDEPPIRTVLRGYLEAEGFVVSEAADGAAALAELRAGSAEPVDLVLLDVMMPGMDGLEVLRRLRTVADTYVIL
VTARSEEVDKLVGLGVGADDYVTKPFSPREVTARVKSVLRRRRDGTTGDDPRLRFDELTVDPIGREITVDGAPVRLTALE
FDLLHALVRAPGRVFSRAQLLEQVWGNDFYGDERVVDVHIRNLRAELGDDATDPHLIATVRGVGYKFIGRPR

Sequences:

>Translated_232_residues
MTRILVVDDEPPIRTVLRGYLEAEGFVVSEAADGAAALAELRAGSAEPVDLVLLDVMMPGMDGLEVLRRLRTVADTYVIL
VTARSEEVDKLVGLGVGADDYVTKPFSPREVTARVKSVLRRRRDGTTGDDPRLRFDELTVDPIGREITVDGAPVRLTALE
FDLLHALVRAPGRVFSRAQLLEQVWGNDFYGDERVVDVHIRNLRAELGDDATDPHLIATVRGVGYKFIGRPR
>Mature_231_residues
TRILVVDDEPPIRTVLRGYLEAEGFVVSEAADGAAALAELRAGSAEPVDLVLLDVMMPGMDGLEVLRRLRTVADTYVILV
TARSEEVDKLVGLGVGADDYVTKPFSPREVTARVKSVLRRRRDGTTGDDPRLRFDELTVDPIGREITVDGAPVRLTALEF
DLLHALVRAPGRVFSRAQLLEQVWGNDFYGDERVVDVHIRNLRAELGDDATDPHLIATVRGVGYKFIGRPR

Specific function: Member of the two-component regulatory system ResD/ResE. Required for the expression of resA, ctaA, qcrABC and fnr; activation role in global regulation of aerobic and anaerobic respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=232, Percent_Identity=42.6724137931034, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=40.3508771929825, Blast_Score=158, Evalue=2e-40,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=38.6266094420601, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=39.3939393939394, Blast_Score=155, Evalue=1e-39,
Organism=Escherichia coli, GI1786911, Length=228, Percent_Identity=40.3508771929825, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=40.9691629955947, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=38.8888888888889, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI87082012, Length=229, Percent_Identity=36.6812227074236, Blast_Score=136, Evalue=9e-34,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=39.2070484581498, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=35.2678571428571, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=35.7142857142857, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=33.0508474576271, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=33.4801762114537, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=32.7510917030568, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788550, Length=121, Percent_Identity=38.0165289256198, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1788191, Length=123, Percent_Identity=34.1463414634146, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1788222, Length=126, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25586; Mature: 25454

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRILVVDDEPPIRTVLRGYLEAEGFVVSEAADGAAALAELRAGSAEPVDLVLLDVMMPG
CCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
MDGLEVLRRLRTVADTYVILVTARSEEVDKLVGLGVGADDYVTKPFSPREVTARVKSVLR
CCHHHHHHHHHHHHCEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
RRRDGTTGDDPRLRFDELTVDPIGREITVDGAPVRLTALEFDLLHALVRAPGRVFSRAQL
HHCCCCCCCCCCEEEECEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHCCHHHHHHHHH
LEQVWGNDFYGDERVVDVHIRNLRAELGDDATDPHLIATVRGVGYKFIGRPR
HHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCCC
>Mature Secondary Structure 
TRILVVDDEPPIRTVLRGYLEAEGFVVSEAADGAAALAELRAGSAEPVDLVLLDVMMPG
CEEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
MDGLEVLRRLRTVADTYVILVTARSEEVDKLVGLGVGADDYVTKPFSPREVTARVKSVLR
CCHHHHHHHHHHHHCEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
RRRDGTTGDDPRLRFDELTVDPIGREITVDGAPVRLTALEFDLLHALVRAPGRVFSRAQL
HHCCCCCCCCCCEEEECEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHCCHHHHHHHHH
LEQVWGNDFYGDERVVDVHIRNLRAELGDDATDPHLIATVRGVGYKFIGRPR
HHHHHCCCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715; 8682783 [H]