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The map label for this gene is sseB [H]

Identifier: 119717142

GI number: 119717142

Start: 3099645

End: 3100475

Strand: Reverse

Name: sseB [H]

Synonym: Noca_2918

Alternate gene names: 119717142

Gene position: 3100475-3099645 (Counterclockwise)

Preceding gene: 119717144

Following gene: 119717139

Centisome position: 62.19

GC content: 77.74

Gene sequence:

>831_bases
ATGCCTTCGCTCCTGATCTCCCCGCTGATCACCGCCGCCGAGCTGTCCGCCGTGCTCGGCTCGGTCACGGTGCTGGACGT
CCGCTACCGGATGGGCGGGCCGGGCGGGCCGGCCGAGTTCGGGGCCGGGCACGTCCCGGGGGCGGCGTACGTCGACCTCG
ACACCGACCTGGCCGCGCCGCCGGGCGCGGGCGGTCGGCATCCGCTGCCGGCTCCTGCGGACTTCGAGGCGGCGATGCGC
CGCGTGGGCGTGCGCGAGGGCCGACCGGTGGTCGTGTACGACGACTGGTCCGGCCTCGCGGCGGCGCGGGCCTGGTGGTT
GCTGCGCTACCACGGTCACCAGGACGTCCGGGTGCTCGACGGGGCCTGGCCGGCGTGGGTGGCGGCCGGGGGAGCGGTGC
AGGCGGTCACCGTCGTCCCCGAGCCCGGCGACTTCACCGCCCGGCCCGGGGCGATGCCGGTGGTCGAGGCCGACGGCGTG
CTGGACGTGCCGGTGCTGGTCGACGCGCGGGCACCCGAGCGCTACCGCGGCGAGACCGAGCCGGTCGACCCGGTCGCCGG
GCACATCCCGGGCGCGGTCAACGTCCCCACCACGACCAACCTGCGCGCCGACGGGCGGTTCCGCTCGGCCGAGGAGCTGC
GGGCGCTGTACGCCGCCGCGGGCGTCACGGGCGAGGCCCCCGGAGCTGGGCCGAGCGTCGCGGCGTACTGCGGCTCCGGG
GTCACCGCCGCCCACGACGTGCTGGCGCTGGAGCTCGCAGGCATCCGCGCGGCGCTCTACCCGGGCAGCTGGTCCGGGTG
GATCACCGACCCCGCACGCCCGGTCGCCTGA

Upstream 100 bases:

>100_bases
CGCCAGCGTGCTCTTGCCCGAGTCCATGGTGCCGGTGAAGAAGTGCAGTTCAGCCACGGGGCGAATCCTGTCACGCCGAC
CCCTCGGCCAGGATGGGTCC

Downstream 100 bases:

>100_bases
CCGGCCGCCCGACCGGGTGCGCGACTACCAGTGCACGCCCTTGAACACCTTCGCGAGCATGATCTGCTCCGACTCGCGGG
TGCCGCCCTCGCCGGGTGTC

Product: thiosulfate sulfurtransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MPSLLISPLITAAELSAVLGSVTVLDVRYRMGGPGGPAEFGAGHVPGAAYVDLDTDLAAPPGAGGRHPLPAPADFEAAMR
RVGVREGRPVVVYDDWSGLAAARAWWLLRYHGHQDVRVLDGAWPAWVAAGGAVQAVTVVPEPGDFTARPGAMPVVEADGV
LDVPVLVDARAPERYRGETEPVDPVAGHIPGAVNVPTTTNLRADGRFRSAEELRALYAAAGVTGEAPGAGPSVAAYCGSG
VTAAHDVLALELAGIRAALYPGSWSGWITDPARPVA

Sequences:

>Translated_276_residues
MPSLLISPLITAAELSAVLGSVTVLDVRYRMGGPGGPAEFGAGHVPGAAYVDLDTDLAAPPGAGGRHPLPAPADFEAAMR
RVGVREGRPVVVYDDWSGLAAARAWWLLRYHGHQDVRVLDGAWPAWVAAGGAVQAVTVVPEPGDFTARPGAMPVVEADGV
LDVPVLVDARAPERYRGETEPVDPVAGHIPGAVNVPTTTNLRADGRFRSAEELRALYAAAGVTGEAPGAGPSVAAYCGSG
VTAAHDVLALELAGIRAALYPGSWSGWITDPARPVA
>Mature_275_residues
PSLLISPLITAAELSAVLGSVTVLDVRYRMGGPGGPAEFGAGHVPGAAYVDLDTDLAAPPGAGGRHPLPAPADFEAAMRR
VGVREGRPVVVYDDWSGLAAARAWWLLRYHGHQDVRVLDGAWPAWVAAGGAVQAVTVVPEPGDFTARPGAMPVVEADGVL
DVPVLVDARAPERYRGETEPVDPVAGHIPGAVNVPTTTNLRADGRFRSAEELRALYAAAGVTGEAPGAGPSVAAYCGSGV
TAAHDVLALELAGIRAALYPGSWSGWITDPARPVA

Specific function: May Be A Sulfotransferase Involved In The Formation Of Thiosulfate. The Rhodanese Activity Of Ssea Is Weak, Its Participation In Detoxification Of Cyanide May Be Small. May Be Involved In The Enhancement Of Serine-Sensitivity. [C]

COG id: COG2897

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 rhodanese domains [H]

Homologues:

Organism=Homo sapiens, GI194473668, Length=248, Percent_Identity=35.4838709677419, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI61835204, Length=248, Percent_Identity=35.4838709677419, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI194473681, Length=248, Percent_Identity=35.4838709677419, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI17402865, Length=262, Percent_Identity=35.8778625954198, Blast_Score=116, Evalue=3e-26,
Organism=Escherichia coli, GI87082121, Length=262, Percent_Identity=33.587786259542, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI87081967, Length=262, Percent_Identity=29.0076335877863, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71997283, Length=248, Percent_Identity=29.8387096774194, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17561888, Length=242, Percent_Identity=28.099173553719, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17543836, Length=237, Percent_Identity=29.957805907173, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17543838, Length=237, Percent_Identity=29.957805907173, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI115534702, Length=210, Percent_Identity=26.1904761904762, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001307 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.1 [H]

Molecular weight: Translated: 28365; Mature: 28234

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLLISPLITAAELSAVLGSVTVLDVRYRMGGPGGPAEFGAGHVPGAAYVDLDTDLAAP
CCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCC
PGAGGRHPLPAPADFEAAMRRVGVREGRPVVVYDDWSGLAAARAWWLLRYHGHQDVRVLD
CCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHEEEEEECCCCCEEEEC
GAWPAWVAAGGAVQAVTVVPEPGDFTARPGAMPVVEADGVLDVPVLVDARAPERYRGETE
CCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCCEEECCEEEECCCCHHHCCCCC
PVDPVAGHIPGAVNVPTTTNLRADGRFRSAEELRALYAAAGVTGEAPGAGPSVAAYCGSG
CCCCHHHCCCCCEECCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCC
VTAAHDVLALELAGIRAALYPGSWSGWITDPARPVA
CCHHHHHHHEEECCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSLLISPLITAAELSAVLGSVTVLDVRYRMGGPGGPAEFGAGHVPGAAYVDLDTDLAAP
CCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCC
PGAGGRHPLPAPADFEAAMRRVGVREGRPVVVYDDWSGLAAARAWWLLRYHGHQDVRVLD
CCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHEEEEEECCCCCEEEEC
GAWPAWVAAGGAVQAVTVVPEPGDFTARPGAMPVVEADGVLDVPVLVDARAPERYRGETE
CCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCCEEECCEEEECCCCHHHCCCCC
PVDPVAGHIPGAVNVPTTTNLRADGRFRSAEELRALYAAAGVTGEAPGAGPSVAAYCGSG
CCCCHHHCCCCCEECCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCC
VTAAHDVLALELAGIRAALYPGSWSGWITDPARPVA
CCHHHHHHHEEECCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]