Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717101
Identifier: 119717101
GI number: 119717101
Start: 3057380
End: 3057790
Strand: Reverse
Name: 119717101
Synonym: Noca_2877
Alternate gene names: NA
Gene position: 3057790-3057380 (Counterclockwise)
Preceding gene: 119717106
Following gene: 119717100
Centisome position: 61.33
GC content: 68.86
Gene sequence:
>411_bases ATGGACGTCGTCGTCCTCGTCGCCCGCATCCTGTTCGCCGCGATCTTCGTCGCGTCCGGCATCGGCCACCTGACCGCCAC CAAGGCGATGGCCGGCTACGCCCAGTTCAAGGGCGTCCCGGCTGCCACCTTCAGCACCGTCGCGTCCGGCGTGCTGATGG TGGTCGGCGCGCTGTCGGTCCTGCTCGGCGTCTGGGGCGACCTCGGCTCCCTGCTGCTGGCCGCCGCCATCGTGCCGATC CCGTTCCTCATGCACGCCTTCTGGAAGGAGCAGGGCGAGGCCAAGATGAACGAGCAGGTCCAGTTCAACAAGACCCTCTC GCTCGTCGGCGGCGCCCTGGCGCTCTTCGCCCTCTTCGCGCTGGTGCCCGACCTGGGCCTGACCATCACCGGTCCGCTCT TCGAGGTCTGA
Upstream 100 bases:
>100_bases TGTGGCGCAGGTCACCGGGCCGTCGGGAAGACCGCGGGCGACGATGTGCTTGAGTCATTCGGTTCAACTTTCAATTATTC GACCCGGAGGTAACCCCCAC
Downstream 100 bases:
>100_bases TCTAGCGTCACGACCCGCCGCGGCCTCGACCCTCCCGGTCGGGGCCGCGGCTGCGTCCGAGCATCGAGCGCCACGGCGCC CGCGCCGGCCTCGGCATGGT
Product: DoxX family protein
Products: NA
Alternate protein names: DoxX Subfamily
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MDVVVLVARILFAAIFVASGIGHLTATKAMAGYAQFKGVPAATFSTVASGVLMVVGALSVLLGVWGDLGSLLLAAAIVPI PFLMHAFWKEQGEAKMNEQVQFNKTLSLVGGALALFALFALVPDLGLTITGPLFEV
Sequences:
>Translated_136_residues MDVVVLVARILFAAIFVASGIGHLTATKAMAGYAQFKGVPAATFSTVASGVLMVVGALSVLLGVWGDLGSLLLAAAIVPI PFLMHAFWKEQGEAKMNEQVQFNKTLSLVGGALALFALFALVPDLGLTITGPLFEV >Mature_136_residues MDVVVLVARILFAAIFVASGIGHLTATKAMAGYAQFKGVPAATFSTVASGVLMVVGALSVLLGVWGDLGSLLLAAAIVPI PFLMHAFWKEQGEAKMNEQVQFNKTLSLVGGALALFALFALVPDLGLTITGPLFEV
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14103; Mature: 14103
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVVVLVARILFAAIFVASGIGHLTATKAMAGYAQFKGVPAATFSTVASGVLMVVGALSV CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LLGVWGDLGSLLLAAAIVPIPFLMHAFWKEQGEAKMNEQVQFNKTLSLVGGALALFALFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPDLGLTITGPLFEV HHHCCCCEECCCHHCC >Mature Secondary Structure MDVVVLVARILFAAIFVASGIGHLTATKAMAGYAQFKGVPAATFSTVASGVLMVVGALSV CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LLGVWGDLGSLLLAAAIVPIPFLMHAFWKEQGEAKMNEQVQFNKTLSLVGGALALFALFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPDLGLTITGPLFEV HHHCCCCEECCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA