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The map label for this gene is glpQ [H]

Identifier: 119716896

GI number: 119716896

Start: 2841299

End: 2842123

Strand: Reverse

Name: glpQ [H]

Synonym: Noca_2671

Alternate gene names: 119716896

Gene position: 2842123-2841299 (Counterclockwise)

Preceding gene: 119716897

Following gene: 119716895

Centisome position: 57.0

GC content: 75.03

Gene sequence:

>825_bases
GTGGTCACCCCGCGCACCGGATTCGGCTACCTCGACGAGCCCGGCCCCGTGCTGGCGTTCGCGCACCGCGGCGGCGCCTA
CCATCCGGAGATCGAGGGCCTGGAGAACACCCTGGCGGCGTTCCGCCACGCGGTGGCGCTCGGCTACGGGTACCTCGAGA
CCGACGCGCACGTCACCCGGGACGGGGTCCTGCTGGCCTTCCACGACAGCGTGCTCGACCGGGTGACCGACCAGCGCGGC
GAGATCGGCGCGCTCACCCACGCCGAGGTACGCCGAGCGCTGGTCGGCGGCCGCGAGTCCGTCCCGACCCTCGCCGAGCT
GTTCGAGGCGTTCCCGCGCGCCCGGTTCAACATCGACCTCAAGTCCGACGGCGCGGTGCCGGCCCTCGCCGAGTTCATCG
CCGCGCGGGAGGCGTGGGGCCGGGTCCTGGTCGGCTCCTTCTCGCGGCGTCGTACCCGCCGGTTCCGCGCCCTGACCGCC
GGCCGGGTGCCGACGGCGGCCACCCCGGTCGAGATCGCCCTGTTCCGCTTCCTGCCCAGCGCCCGGCTGGCCGCGCTGCT
CAGCGGCGGCCGGTCGGCCGCGCTGCAGGTCCCCCACCGCCGGGGACGGCTGACGATCGCGACCGCCGGGCTGGTCCGGC
GGGCGCACGCCACCGGCCGGCACGTCCACGTGTGGACCATCGACGACGCCGACGAGATGCGGCTGCTGCTCGACCGGGGC
GTCGACGGGCTGTTCACCGACCGGACCGACATACTCAAGGACGTCCTCACCGAGCGGGACCAGTGGCAGGACGGGGCACG
GGGCCAGGACAGGGAGGCGCCATGA

Upstream 100 bases:

>100_bases
TCTCGGTGCCACAACGAGGACAGGTCAAGGTCTCCATGGTCCGACGCTACCGCCCGGCCTGCGGCGCGCGGTGCACCCGG
GGTCGGGTTTACTGCATCCC

Downstream 100 bases:

>100_bases
CGGCGAGCGGGATCGCGGACCTCGGCCCGCTCCGGCGGGCGCGCGAGCAGCAGGCCTGGTACTGGTACGACTGGGCGAAC
AGCGCGTACGTGACGACCAC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MVTPRTGFGYLDEPGPVLAFAHRGGAYHPEIEGLENTLAAFRHAVALGYGYLETDAHVTRDGVLLAFHDSVLDRVTDQRG
EIGALTHAEVRRALVGGRESVPTLAELFEAFPRARFNIDLKSDGAVPALAEFIAAREAWGRVLVGSFSRRRTRRFRALTA
GRVPTAATPVEIALFRFLPSARLAALLSGGRSAALQVPHRRGRLTIATAGLVRRAHATGRHVHVWTIDDADEMRLLLDRG
VDGLFTDRTDILKDVLTERDQWQDGARGQDREAP

Sequences:

>Translated_274_residues
MVTPRTGFGYLDEPGPVLAFAHRGGAYHPEIEGLENTLAAFRHAVALGYGYLETDAHVTRDGVLLAFHDSVLDRVTDQRG
EIGALTHAEVRRALVGGRESVPTLAELFEAFPRARFNIDLKSDGAVPALAEFIAAREAWGRVLVGSFSRRRTRRFRALTA
GRVPTAATPVEIALFRFLPSARLAALLSGGRSAALQVPHRRGRLTIATAGLVRRAHATGRHVHVWTIDDADEMRLLLDRG
VDGLFTDRTDILKDVLTERDQWQDGARGQDREAP
>Mature_274_residues
MVTPRTGFGYLDEPGPVLAFAHRGGAYHPEIEGLENTLAAFRHAVALGYGYLETDAHVTRDGVLLAFHDSVLDRVTDQRG
EIGALTHAEVRRALVGGRESVPTLAELFEAFPRARFNIDLKSDGAVPALAEFIAAREAWGRVLVGSFSRRRTRRFRALTA
GRVPTAATPVEIALFRFLPSARLAALLSGGRSAALQVPHRRGRLTIATAGLVRRAHATGRHVHVWTIDDADEMRLLLDRG
VDGLFTDRTDILKDVLTERDQWQDGARGQDREAP

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI260763876, Length=270, Percent_Identity=28.8888888888889, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI260763880, Length=119, Percent_Identity=38.655462184874, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI260763878, Length=119, Percent_Identity=38.655462184874, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 30084; Mature: 30084

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPRTGFGYLDEPGPVLAFAHRGGAYHPEIEGLENTLAAFRHAVALGYGYLETDAHVTR
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEECC
DGVLLAFHDSVLDRVTDQRGEIGALTHAEVRRALVGGRESVPTLAELFEAFPRARFNIDL
CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEE
KSDGAVPALAEFIAAREAWGRVLVGSFSRRRTRRFRALTAGRVPTAATPVEIALFRFLPS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCH
ARLAALLSGGRSAALQVPHRRGRLTIATAGLVRRAHATGRHVHVWTIDDADEMRLLLDRG
HHHHHHHHCCCCEEEECCCCCCCEEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCC
VDGLFTDRTDILKDVLTERDQWQDGARGQDREAP
CCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVTPRTGFGYLDEPGPVLAFAHRGGAYHPEIEGLENTLAAFRHAVALGYGYLETDAHVTR
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEECC
DGVLLAFHDSVLDRVTDQRGEIGALTHAEVRRALVGGRESVPTLAELFEAFPRARFNIDL
CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEE
KSDGAVPALAEFIAAREAWGRVLVGSFSRRRTRRFRALTAGRVPTAATPVEIALFRFLPS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCH
ARLAALLSGGRSAALQVPHRRGRLTIATAGLVRRAHATGRHVHVWTIDDADEMRLLLDRG
HHHHHHHHCCCCEEEECCCCCCCEEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCC
VDGLFTDRTDILKDVLTERDQWQDGARGQDREAP
CCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]