| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716855
Identifier: 119716855
GI number: 119716855
Start: 2797996
End: 2798844
Strand: Reverse
Name: 119716855
Synonym: Noca_2630
Alternate gene names: NA
Gene position: 2798844-2797996 (Counterclockwise)
Preceding gene: 119716861
Following gene: 119716849
Centisome position: 56.14
GC content: 71.02
Gene sequence:
>849_bases GTGATCGAGCTCGAGGACGTCCCGGACCTGGTGGACCCCGTGGTGATCGCCGCGTTCGAGGGCTGGAACGACGCCGCGGA CGCGGCCTCCTCGGTGATCGACCACCTGATCCGGGTATGGGGTGCGCGGACCGTCGGCGCCGTCGACCCCGAGGACTTCT ACGACTTCCAGGTCAACCGTCCCGTGGTCGGCACCGACGAGCTGGGCCACCGCCGACTGACCTGGCCGAGCACCCAGATC GCGATCGCCTCGCCTCCCGACCTCGACCGCGACGTGATCTTGATCCGTGGCATCGAGCCGAACATGCGGTGGCGCCAGTT CTGTGCCGAGCTGCTCGCCGCCTGCGACGAGCTCGGCGGTGAGCTCGTCGTGACGCTCGGCGCCCTGCTCGCCGACACAC CGCACACCCGGCCGATCCCGGTCAGCGGCACCGCCACCGAGCCCGAGCTCGTCGACCGGCTCAAGCTCGAGCAGTCGACG TACGAGGGACCGACGGGCATCGTCGGCGTCTTCCAGGACGCGTGCATGCGGGTGGACGTGCCGGCCGTGTCGTACTGGGC GGCGGTCCCTCACTACGTCGCGCAGCCGCCGTGCCCCAAGGCGACGCTCGCGCTGATCGGACAGCTCGAGGACCTGCTCG AGGTCAGCATCCCCCTCGGCGACCTGCCCGAGGACGCCCGCGCCTGGGAGCGTGGTGTCGACGAGCTCGCCCAGGAGGAC GAGGACATCGCGGACTACGTGCGGGCCCTCGAGGAGACCCGCGACACCACCGACCTGCCCGAAGCGTCCGGCGAGGCGAT CGCGCGCGAGTTCGAGCGGTACCTCAAGCGCCGTCAGGGCGACGAGTAG
Upstream 100 bases:
>100_bases TGCCAGCGTAGGAACCGTGTCCACGACGTGGACTCGCCATCCAGATCGTGACATCGCGCGTCCGCAGGGGAGAAATCCCC GCGGCGACTACGCTTGTGGG
Downstream 100 bases:
>100_bases ATCGGTCCACGGCCGGCCTGGGAGGGCCGGGGTCGGCTCCGCGCCCGGTGATGTCCGTCGTTTGGTCACCAACCACAGTT GGGAGCGCTCCCGATCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNRPVVGTDELGHRRLTWPSTQI AIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGGELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQST YEGPTGIVGVFQDACMRVDVPAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE
Sequences:
>Translated_282_residues MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNRPVVGTDELGHRRLTWPSTQI AIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGGELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQST YEGPTGIVGVFQDACMRVDVPAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE >Mature_282_residues MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNRPVVGTDELGHRRLTWPSTQI AIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGGELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQST YEGPTGIVGVFQDACMRVDVPAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31078; Mature: 31078
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNR CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEECCC PVVGTDELGHRRLTWPSTQIAIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGG CCCCCCCCCCCEECCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC ELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQSTYEGPTGIVGVFQDACMRVDV HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC PAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIELEDVPDLVDPVVIAAFEGWNDAADAASSVIDHLIRVWGARTVGAVDPEDFYDFQVNR CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEECCC PVVGTDELGHRRLTWPSTQIAIASPPDLDRDVILIRGIEPNMRWRQFCAELLAACDELGG CCCCCCCCCCCEECCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC ELVVTLGALLADTPHTRPIPVSGTATEPELVDRLKLEQSTYEGPTGIVGVFQDACMRVDV HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC PAVSYWAAVPHYVAQPPCPKATLALIGQLEDLLEVSIPLGDLPEDARAWERGVDELAQED CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC EDIADYVRALEETRDTTDLPEASGEAIAREFERYLKRRQGDE HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA