Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is pgi [H]
Identifier: 119716765
GI number: 119716765
Start: 2707142
End: 2708809
Strand: Reverse
Name: pgi [H]
Synonym: Noca_2539
Alternate gene names: 119716765
Gene position: 2708809-2707142 (Counterclockwise)
Preceding gene: 119716766
Following gene: 119716764
Centisome position: 54.33
GC content: 73.74
Gene sequence:
>1668_bases ATGAGCGATCACCCCGCGCCCGCAGGTGGCTGGCATGTCGCCCGGGGTGATCACCACGAGCTGCACGTCGGCTTCCGCGA CGAGTCGGCGTACGTCGCCGCGGTCCGCGGCCTCGTCGACGACAAGGTCGCCAGCCGGCTCGCCGCTCGCGACCACACGC TGTGGGGATCGGCGGCCGAGGACGAGGCCGCCAAGCGACTCGGCTGGGTCGGCCTGTCCCGGTCCTCGCGCGACCTGATC AGCGACATCGCCGAGCTCGAGGTCGAGCTGCGTGAGCAGGAGCTGTTCCGCGTGGTGCTGTGCGGCATGGGCGGCTCCTC CCTGGCGCCCGAGGTGATCTGCCAGAGCGACGAGGTCGACCTCGTGGTGCTGGACTCCTCCGACCCCGACTTCGTGCGCT CGGCCATCGAGCAGCGCCTGGACGAGACCGTGGTCATCGTCTCGAGCAAGTCCGGCGGCACCGTCGAGACCGACAGCCAG CGCCGGGCGTTCGAGAAGGCGTTCACCGATGCCGGGATCGATCCCGCGGGGCGGATCGTCGTCGTCACCGACCCCGGGTC GCCGCTGGAGAAGTCGGCGCGCGACGCGGGCTACCGGGTGTTCCTGGCGGACCCGGAGGTCGGGGGCCGCTACTCCGCGC TGACGGCGTTCGGCCTCGTCCCCAGCGGCCTGGCGGGCGCGAACGTCGCCGAGCTCCTCGACGAGGCCGAGGCGATCCGC CCGGCGCTCGAGGCGGACTCGGTCGACAACCCGGCCCTGCGCCTGGGCGCGCTGCTCGGCGTCGCCAATCTCGCGGGTGC CGACAAGCTCGTCCTGACCGGCGTGGGCGCGCCGTACGCCGGCTTCGGCGACTGGGCCGAGCAGCTGGTCGCCGAGTCGA CCGGCAAGGACGGCAAGGGCATCTTGCCGGTCGTCGTCGGCTCCTTGGACTCGCCGAACTTCACCCCCAGCACCCCCGAC GAGGTGCTGGTCGCGTTCGGGCCCGGCCACGCCGAGCGCGCGGACCGGATCCGGCCCGCCTCGGGTTGGGGCGCCACCGT CGACGCGCCGCTCGGCGCGCAGCTGCTCCTGTGGGAGTACGCCACCGCCATCGCCGGCCGGCTGATCGGCATCAACCCGT TCGACCAGCCCGACGTCGAGAGCGCCAAGGCGGCCGCCCGCCAGATGCTCGACGGCGGCGCCAGCACCCCCGAGCCGGCC TTCACCGACGGTCCGGTCGCCGTCTTCGTGTCGGAGGGCTGGCTGCCCGACGGCGTCTCCACGGTCACCGCCGCGGTCGC GGCGCTGCTGGACCGCGTCGATGGCGAGCAGGGCTACGTCGCGGTCCAGGCCTACCTCGACCGGCACCGCGACGCGCGCC TGGCGGAGGTGCGCGACGCGCTCGCCGTACGGACCGGCCGGCCGGTGACCTTCGGTTGGGGCCCACGCTTCCTGCACTCC ACCGGGCAGTACCACAAGGGCGGGCCCGCGACCGGCGTCTACCTCCAGGTGACAGGCCAGCCCGAGGCCGACCTCGGCGT ACCCGACCGCCCGTTCACGTTCCACGAGTTCATCACCGCGCAGGCGGTCGGCGACGGCCAGGTCCTCGCAGCCAAGGGCC GGCCCGTGCTCCGCCTGCACCTGTCGTCACCGAGCGACCTGGACGCCGTGCTGGGAGCGCTCGGGTGA
Upstream 100 bases:
>100_bases TGGCGGTCCTGGAGACCGAGGGCGTGGACAAGTTCAAGAAGTCGTGGTCCGAGCTCACCGAGAAGGTGTCCGCCCAGATG GAGAAGGCCGAGGCCTCGGC
Downstream 100 bases:
>100_bases CGACGCCTCCGGGCTGGCACAACCCCCTCCGCGACCCGCGCGATCGTCGGCTGCCGCGGATCGCGGGGCCGAGCGGGATG GTGCTCTTCGGCGTCACCGG
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSDHPAPAGGWHVARGDHHELHVGFRDESAYVAAVRGLVDDKVASRLAARDHTLWGSAAEDEAAKRLGWVGLSRSSRDLI SDIAELEVELREQELFRVVLCGMGGSSLAPEVICQSDEVDLVVLDSSDPDFVRSAIEQRLDETVVIVSSKSGGTVETDSQ RRAFEKAFTDAGIDPAGRIVVVTDPGSPLEKSARDAGYRVFLADPEVGGRYSALTAFGLVPSGLAGANVAELLDEAEAIR PALEADSVDNPALRLGALLGVANLAGADKLVLTGVGAPYAGFGDWAEQLVAESTGKDGKGILPVVVGSLDSPNFTPSTPD EVLVAFGPGHAERADRIRPASGWGATVDAPLGAQLLLWEYATAIAGRLIGINPFDQPDVESAKAAARQMLDGGASTPEPA FTDGPVAVFVSEGWLPDGVSTVTAAVAALLDRVDGEQGYVAVQAYLDRHRDARLAEVRDALAVRTGRPVTFGWGPRFLHS TGQYHKGGPATGVYLQVTGQPEADLGVPDRPFTFHEFITAQAVGDGQVLAAKGRPVLRLHLSSPSDLDAVLGALG
Sequences:
>Translated_555_residues MSDHPAPAGGWHVARGDHHELHVGFRDESAYVAAVRGLVDDKVASRLAARDHTLWGSAAEDEAAKRLGWVGLSRSSRDLI SDIAELEVELREQELFRVVLCGMGGSSLAPEVICQSDEVDLVVLDSSDPDFVRSAIEQRLDETVVIVSSKSGGTVETDSQ RRAFEKAFTDAGIDPAGRIVVVTDPGSPLEKSARDAGYRVFLADPEVGGRYSALTAFGLVPSGLAGANVAELLDEAEAIR PALEADSVDNPALRLGALLGVANLAGADKLVLTGVGAPYAGFGDWAEQLVAESTGKDGKGILPVVVGSLDSPNFTPSTPD EVLVAFGPGHAERADRIRPASGWGATVDAPLGAQLLLWEYATAIAGRLIGINPFDQPDVESAKAAARQMLDGGASTPEPA FTDGPVAVFVSEGWLPDGVSTVTAAVAALLDRVDGEQGYVAVQAYLDRHRDARLAEVRDALAVRTGRPVTFGWGPRFLHS TGQYHKGGPATGVYLQVTGQPEADLGVPDRPFTFHEFITAQAVGDGQVLAAKGRPVLRLHLSSPSDLDAVLGALG >Mature_554_residues SDHPAPAGGWHVARGDHHELHVGFRDESAYVAAVRGLVDDKVASRLAARDHTLWGSAAEDEAAKRLGWVGLSRSSRDLIS DIAELEVELREQELFRVVLCGMGGSSLAPEVICQSDEVDLVVLDSSDPDFVRSAIEQRLDETVVIVSSKSGGTVETDSQR RAFEKAFTDAGIDPAGRIVVVTDPGSPLEKSARDAGYRVFLADPEVGGRYSALTAFGLVPSGLAGANVAELLDEAEAIRP ALEADSVDNPALRLGALLGVANLAGADKLVLTGVGAPYAGFGDWAEQLVAESTGKDGKGILPVVVGSLDSPNFTPSTPDE VLVAFGPGHAERADRIRPASGWGATVDAPLGAQLLLWEYATAIAGRLIGINPFDQPDVESAKAAARQMLDGGASTPEPAF TDGPVAVFVSEGWLPDGVSTVTAAVAALLDRVDGEQGYVAVQAYLDRHRDARLAEVRDALAVRTGRPVTFGWGPRFLHST GQYHKGGPATGVYLQVTGQPEADLGVPDRPFTFHEFITAQAVGDGQVLAAKGRPVLRLHLSSPSDLDAVLGALG
Specific function: Unknown
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 58172; Mature: 58040
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHPAPAGGWHVARGDHHELHVGFRDESAYVAAVRGLVDDKVASRLAARDHTLWGSAAE CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH DEAAKRLGWVGLSRSSRDLISDIAELEVELREQELFRVVLCGMGGSSLAPEVICQSDEVD HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHCCCCCCC LVVLDSSDPDFVRSAIEQRLDETVVIVSSKSGGTVETDSQRRAFEKAFTDAGIDPAGRIV EEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE VVTDPGSPLEKSARDAGYRVFLADPEVGGRYSALTAFGLVPSGLAGANVAELLDEAEAIR EEECCCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH PALEADSVDNPALRLGALLGVANLAGADKLVLTGVGAPYAGFGDWAEQLVAESTGKDGKG HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC ILPVVVGSLDSPNFTPSTPDEVLVAFGPGHAERADRIRPASGWGATVDAPLGAQLLLWEY EEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEECCCCCCHHHHHHH ATAIAGRLIGINPFDQPDVESAKAAARQMLDGGASTPEPAFTDGPVAVFVSEGWLPDGVS HHHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHH TVTAAVAALLDRVDGEQGYVAVQAYLDRHRDARLAEVRDALAVRTGRPVTFGWGPRFLHS HHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHC TGQYHKGGPATGVYLQVTGQPEADLGVPDRPFTFHEFITAQAVGDGQVLAAKGRPVLRLH CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEEEEE LSSPSDLDAVLGALG CCCCCHHHHHHHHCC >Mature Secondary Structure SDHPAPAGGWHVARGDHHELHVGFRDESAYVAAVRGLVDDKVASRLAARDHTLWGSAAE CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH DEAAKRLGWVGLSRSSRDLISDIAELEVELREQELFRVVLCGMGGSSLAPEVICQSDEVD HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHCCCCCCC LVVLDSSDPDFVRSAIEQRLDETVVIVSSKSGGTVETDSQRRAFEKAFTDAGIDPAGRIV EEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE VVTDPGSPLEKSARDAGYRVFLADPEVGGRYSALTAFGLVPSGLAGANVAELLDEAEAIR EEECCCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH PALEADSVDNPALRLGALLGVANLAGADKLVLTGVGAPYAGFGDWAEQLVAESTGKDGKG HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC ILPVVVGSLDSPNFTPSTPDEVLVAFGPGHAERADRIRPASGWGATVDAPLGAQLLLWEY EEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEECCCCCCHHHHHHH ATAIAGRLIGINPFDQPDVESAKAAARQMLDGGASTPEPAFTDGPVAVFVSEGWLPDGVS HHHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHH TVTAAVAALLDRVDGEQGYVAVQAYLDRHRDARLAEVRDALAVRTGRPVTFGWGPRFLHS HHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHC TGQYHKGGPATGVYLQVTGQPEADLGVPDRPFTFHEFITAQAVGDGQVLAAKGRPVLRLH CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEEEEE LSSPSDLDAVLGALG CCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA