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The map label for this gene is yngJ [H]

Identifier: 119716743

GI number: 119716743

Start: 2684172

End: 2685359

Strand: Reverse

Name: yngJ [H]

Synonym: Noca_2517

Alternate gene names: 119716743

Gene position: 2685359-2684172 (Counterclockwise)

Preceding gene: 119716748

Following gene: 119716742

Centisome position: 53.86

GC content: 70.03

Gene sequence:

>1188_bases
ATGCACATCGCCCTCACGCCCGAGCAGCAGCGGCTCCGCGAGGAGCTGCGCGAGTACTTCACCGCCCTGGTCACCCCCGA
GGTGCGCGCCGGCCTCGCATCGGCGACCGGCGAGTTCGGCGAGGCGGGCGTCTACAAGGACGTCATCCGCACCCTCGGGT
CCGACGGCTGGCTCGGCATCGGCTGGCCGGAGGAGTACGGCGGGCAGGCTCGCTCGATGGTCGAGCAGCTGATCTTCACC
GACGTCGCCGCCGTCGCCGGGGTGCCGATCCCCTACCTGACGCTGAACACCGTCGGGCCCACGATCATGCGCTACGGGAC
CGCGGAGCAGAAGGAGTACTTCCTGCCGCGCATCCTCGCGGGCGACCTGCACTTCTCCATCGGCTACTCCGAGCCGGGGT
CCGGCACCGACCTCGCGTCCCTGAAGACCAGGGCGGTCCGCGAGGGTGACGAGTGGGTGATCAACGGCCAGAAGATGTGG
ACCTCCCTGATCCAGTACGCCGACTGGATCTGGCTCGCCTGCCGCACCGACCCCGACCTCCCCCGGCACAAGGGCCTGTC
GATGATCCTGGTGCCCGCGGACGCTGCCGGCTTCTCCTACACCCCCGTGCACACGGTCGCCGGCGTGAGCACGAGTGCGA
CCTACTACGAGGACGTCCGGGTGCCGTACGGCAACCTGGTCGGCGAGCTCAACGGCGGCTGGTCGCTGATGACCAACCAG
CTCAACCACGAGCGCGTCGCGCTCACCTCGTCCGCACCGCTCACCCACTCGATCGAGCTGGTGCGGCGCTGGGCCCAGGA
GACGAAGAACCCCGATGGTCAACGGGTGATCGACGCCGAGTGGGTGCAGATCGCCCTCGGGCGGGCGCACGCGCGCACCG
AGGCGCTCTCCCTGATCAACTGGAAGCTCGCGGCCGACGCCGACGCGGGGGTCGACCTGTCCCCCGCGGAGGCGTCGGCC
ACGAAGATCTACGGCTCCGAGCTGGCGACCGAGGTGTACCGGTCGCTGATGGAGATCGTCGGACCCAACGCCGGCGTGAC
CGGCGACTCCGAGGGCGCGGTGCTGGCGGGCCGGCTCGAGCGCTACCACCGCTCCGCACTGGTGATGACCTTCGGCGGCG
GCACCAACGAGATCCAGCGCGACATCATCGGCTACGTCGGGCTCGGACTGCCCGCGACGAAGAGGTAG

Upstream 100 bases:

>100_bases
CAGACAAGTGGACCAAAACGAGAACAGGTTATAGTTTTTAGGTCGCGGTTTCCAGCAGCACCACCTTCCCACCGCCAGCT
GTCCCCACGGGAGTCCCGCC

Downstream 100 bases:

>100_bases
GACAGAGGGACGACCATGGACTTCACCTTCACCCCCGAGCAGGACGAGGCCGCCGCGCTCGCGGCCGGCATCCTGCGCGA
CCGCGCGACCACCGAGCGGC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MHIALTPEQQRLREELREYFTALVTPEVRAGLASATGEFGEAGVYKDVIRTLGSDGWLGIGWPEEYGGQARSMVEQLIFT
DVAAVAGVPIPYLTLNTVGPTIMRYGTAEQKEYFLPRILAGDLHFSIGYSEPGSGTDLASLKTRAVREGDEWVINGQKMW
TSLIQYADWIWLACRTDPDLPRHKGLSMILVPADAAGFSYTPVHTVAGVSTSATYYEDVRVPYGNLVGELNGGWSLMTNQ
LNHERVALTSSAPLTHSIELVRRWAQETKNPDGQRVIDAEWVQIALGRAHARTEALSLINWKLAADADAGVDLSPAEASA
TKIYGSELATEVYRSLMEIVGPNAGVTGDSEGAVLAGRLERYHRSALVMTFGGGTNEIQRDIIGYVGLGLPATKR

Sequences:

>Translated_395_residues
MHIALTPEQQRLREELREYFTALVTPEVRAGLASATGEFGEAGVYKDVIRTLGSDGWLGIGWPEEYGGQARSMVEQLIFT
DVAAVAGVPIPYLTLNTVGPTIMRYGTAEQKEYFLPRILAGDLHFSIGYSEPGSGTDLASLKTRAVREGDEWVINGQKMW
TSLIQYADWIWLACRTDPDLPRHKGLSMILVPADAAGFSYTPVHTVAGVSTSATYYEDVRVPYGNLVGELNGGWSLMTNQ
LNHERVALTSSAPLTHSIELVRRWAQETKNPDGQRVIDAEWVQIALGRAHARTEALSLINWKLAADADAGVDLSPAEASA
TKIYGSELATEVYRSLMEIVGPNAGVTGDSEGAVLAGRLERYHRSALVMTFGGGTNEIQRDIIGYVGLGLPATKR
>Mature_395_residues
MHIALTPEQQRLREELREYFTALVTPEVRAGLASATGEFGEAGVYKDVIRTLGSDGWLGIGWPEEYGGQARSMVEQLIFT
DVAAVAGVPIPYLTLNTVGPTIMRYGTAEQKEYFLPRILAGDLHFSIGYSEPGSGTDLASLKTRAVREGDEWVINGQKMW
TSLIQYADWIWLACRTDPDLPRHKGLSMILVPADAAGFSYTPVHTVAGVSTSATYYEDVRVPYGNLVGELNGGWSLMTNQ
LNHERVALTSSAPLTHSIELVRRWAQETKNPDGQRVIDAEWVQIALGRAHARTEALSLINWKLAADADAGVDLSPAEASA
TKIYGSELATEVYRSLMEIVGPNAGVTGDSEGAVLAGRLERYHRSALVMTFGGGTNEIQRDIIGYVGLGLPATKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=393, Percent_Identity=25.4452926208651, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI4501859, Length=394, Percent_Identity=27.6649746192893, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI226958414, Length=348, Percent_Identity=26.1494252873563, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4501857, Length=393, Percent_Identity=26.2086513994911, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI4557233, Length=404, Percent_Identity=26.2376237623762, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI4557231, Length=379, Percent_Identity=25.065963060686, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI187960098, Length=379, Percent_Identity=25.065963060686, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI76496475, Length=350, Percent_Identity=26.8571428571429, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI21361497, Length=361, Percent_Identity=24.9307479224377, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI4557235, Length=350, Percent_Identity=26.8571428571429, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI7656849, Length=343, Percent_Identity=25.0728862973761, Blast_Score=97, Evalue=3e-20,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=26.5625, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1786223, Length=346, Percent_Identity=23.9884393063584, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17570075, Length=396, Percent_Identity=26.010101010101, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17538396, Length=344, Percent_Identity=27.3255813953488, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17508101, Length=396, Percent_Identity=27.7777777777778, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17551932, Length=345, Percent_Identity=28.695652173913, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17506239, Length=399, Percent_Identity=27.3182957393484, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=394, Percent_Identity=24.8730964467005, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17505929, Length=347, Percent_Identity=26.8011527377522, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=398, Percent_Identity=25.8793969849246, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71990804, Length=291, Percent_Identity=28.5223367697594, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI32563615, Length=243, Percent_Identity=30.4526748971193, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=344, Percent_Identity=23.546511627907, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71985184, Length=296, Percent_Identity=23.9864864864865, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=232, Percent_Identity=24.5689655172414, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=254, Percent_Identity=25.5905511811024, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21355753, Length=394, Percent_Identity=26.6497461928934, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24646207, Length=394, Percent_Identity=28.4263959390863, Blast_Score=118, Evalue=6e-27,
Organism=Drosophila melanogaster, GI281363737, Length=351, Percent_Identity=28.2051282051282, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21356377, Length=390, Percent_Identity=26.4102564102564, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24660351, Length=393, Percent_Identity=28.498727735369, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24666513, Length=355, Percent_Identity=25.9154929577465, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42996; Mature: 42996

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIALTPEQQRLREELREYFTALVTPEVRAGLASATGEFGEAGVYKDVIRTLGSDGWLGI
CEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEC
GWPEEYGGQARSMVEQLIFTDVAAVAGVPIPYLTLNTVGPTIMRYGTAEQKEYFLPRILA
CCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHC
GDLHFSIGYSEPGSGTDLASLKTRAVREGDEWVINGQKMWTSLIQYADWIWLACRTDPDL
CCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCEEEEEECCCCCC
PRHKGLSMILVPADAAGFSYTPVHTVAGVSTSATYYEDVRVPYGNLVGELNGGWSLMTNQ
CCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHCCCCHHHHEECCCCCHHHHHCC
LNHERVALTSSAPLTHSIELVRRWAQETKNPDGQRVIDAEWVQIALGRAHARTEALSLIN
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHE
WKLAADADAGVDLSPAEASATKIYGSELATEVYRSLMEIVGPNAGVTGDSEGAVLAGRLE
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
RYHRSALVMTFGGGTNEIQRDIIGYVGLGLPATKR
HHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHIALTPEQQRLREELREYFTALVTPEVRAGLASATGEFGEAGVYKDVIRTLGSDGWLGI
CEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEC
GWPEEYGGQARSMVEQLIFTDVAAVAGVPIPYLTLNTVGPTIMRYGTAEQKEYFLPRILA
CCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHC
GDLHFSIGYSEPGSGTDLASLKTRAVREGDEWVINGQKMWTSLIQYADWIWLACRTDPDL
CCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCEEEEEECCCCCC
PRHKGLSMILVPADAAGFSYTPVHTVAGVSTSATYYEDVRVPYGNLVGELNGGWSLMTNQ
CCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHCCCCHHHHEECCCCCHHHHHCC
LNHERVALTSSAPLTHSIELVRRWAQETKNPDGQRVIDAEWVQIALGRAHARTEALSLIN
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHE
WKLAADADAGVDLSPAEASATKIYGSELATEVYRSLMEIVGPNAGVTGDSEGAVLAGRLE
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
RYHRSALVMTFGGGTNEIQRDIIGYVGLGLPATKR
HHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]