Definition | Nocardioides sp. JS614 chromosome, complete genome. |
---|---|
Accession | NC_008699 |
Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716681
Identifier: 119716681
GI number: 119716681
Start: 2615507
End: 2616061
Strand: Reverse
Name: 119716681
Synonym: Noca_2455
Alternate gene names: NA
Gene position: 2616061-2615507 (Counterclockwise)
Preceding gene: 119716682
Following gene: 119716680
Centisome position: 52.47
GC content: 77.3
Gene sequence:
>555_bases ATGGGACCCGCCGCCGAGCTGCTGGCCCTGGCGCGGCGCCGTCCACCGACGCTCGGCGAAGCGCGGCTGATCTGCGTCGA CGGCCCGGCGGGGTCGGGCAAGACCACGCTGGCGGCCACCGTCGCAGCGCTGGATCCGGCCGTCCGGGTCGTGCACCTCG ACGATCTCTACGAGGGCTGGGCCGGCCTGCCTCGCGTGGCCGACCAGCTCGACGACCTGCTGCTGCCGCTGGCGCGCGGG GTCGCCGGGACCTACCGCCGCTACGACTGGGCCGCGCAGGCGCTGGCCGAGACCGTGACCGTGGACCCGGTGCCGGTCCT GCTGCTCGAGGGGGTCGGGTGCGGCACCCGACGACATGCGCCCCTGGTCACGGCCCTGGCCTGGGTGGAGGCGCCCGCCG GCGTGCGCCTGCGCCGCGGGCTGGCGCGCGACGGCGAGGGGATGCGCCCCCAGTGGGTGCAGTGGCAGGTCGACGAGGCG GCGCTGTTCGCCCGTGAGGACACCCGGGCCCGCGCCGACCTGGTGGTCGACACCGGGACCTCCGCCCCGTCCTAG
Upstream 100 bases:
>100_bases CCTTCGAGCACGGCACCACCGTGCACCTGCTGTCCGGCAGCCGGTTCGTCGACGCCGTGCCCACCTACCGTGGCTGCGGC CTGGCCTTCTAGGACGCTGG
Downstream 100 bases:
>100_bases GGTGTGGTCCATGCTCCCTCCCAGCGGCGACCAGTACGAGATCTCGGCGGGCGGCTACCGGGCGGTCGTGACGGAGTGCG GTGCCGGGCTGCGGCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MGPAAELLALARRRPPTLGEARLICVDGPAGSGKTTLAATVAALDPAVRVVHLDDLYEGWAGLPRVADQLDDLLLPLARG VAGTYRRYDWAAQALAETVTVDPVPVLLLEGVGCGTRRHAPLVTALAWVEAPAGVRLRRGLARDGEGMRPQWVQWQVDEA ALFAREDTRARADLVVDTGTSAPS
Sequences:
>Translated_184_residues MGPAAELLALARRRPPTLGEARLICVDGPAGSGKTTLAATVAALDPAVRVVHLDDLYEGWAGLPRVADQLDDLLLPLARG VAGTYRRYDWAAQALAETVTVDPVPVLLLEGVGCGTRRHAPLVTALAWVEAPAGVRLRRGLARDGEGMRPQWVQWQVDEA ALFAREDTRARADLVVDTGTSAPS >Mature_183_residues GPAAELLALARRRPPTLGEARLICVDGPAGSGKTTLAATVAALDPAVRVVHLDDLYEGWAGLPRVADQLDDLLLPLARGV AGTYRRYDWAAQALAETVTVDPVPVLLLEGVGCGTRRHAPLVTALAWVEAPAGVRLRRGLARDGEGMRPQWVQWQVDEAA LFAREDTRARADLVVDTGTSAPS
Specific function: Unknown
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19575; Mature: 19443
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPAAELLALARRRPPTLGEARLICVDGPAGSGKTTLAATVAALDPAVRVVHLDDLYEGW CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHH AGLPRVADQLDDLLLPLARGVAGTYRRYDWAAQALAETVTVDPVPVLLLEGVGCGTRRHA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCC PLVTALAWVEAPAGVRLRRGLARDGEGMRPQWVQWQVDEAALFAREDTRARADLVVDTGT HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCEEEEEECCC SAPS CCCC >Mature Secondary Structure GPAAELLALARRRPPTLGEARLICVDGPAGSGKTTLAATVAALDPAVRVVHLDDLYEGW CHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHH AGLPRVADQLDDLLLPLARGVAGTYRRYDWAAQALAETVTVDPVPVLLLEGVGCGTRRHA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCC PLVTALAWVEAPAGVRLRRGLARDGEGMRPQWVQWQVDEAALFAREDTRARADLVVDTGT HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCEEEEEECCC SAPS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA